Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1153 ATGAAGAACATAGTTCCAAAGCTGGAAAACGTGCCTATAGGATTCAGATTTTGTCCAAAAGATGAAGAGCTAGTGGACCATTACCTCAGACACAAGTTGTTGGACGATGAAATCGGTGTGAACATCATCCCTGAGATTGACCTTTGCAAGGTGGATCCTTGGGAAGTCCGAGAAAAATCAAAGATAAAATCCGAAGACCCAGAATGGTTTTTCTTCAGTCCTGTTGATTACAAGTATCCAAAAAGTAAAAGGGTTAACAGAAAAACAAAGGGTGGGTTTTGGAAATCCACTGGAAATGACCGCTACATCAAGGTAAAAGGAACCAACAATGTCATTGGGACCAAGAAGACTCTTGTTTTCTATGAAGGCGGTGTTTCTGATAGTGTCAAGTCTGACTGGGTTATTCATGAATATCATGCTGTTACCTTTCCTGAAAGCCAGAGGACTTTTGTTTTATGTCGCTTGATGAAGAAAGATGGCAAAAGAGATGAAAGGGGAACTGATGCATTGATCTGTGATGAAGCTGAGCCAAGTAGAAACATGGCTTCCGACTATGAAAATCAAGTAACATCTGAAGGAATTGCAGATGTAGGAAGTACTTTGCCAGAAATGAGCATGGATACTATCTTTCAGGCGATGCAACAAGCAGAGATATACTTCTCTCAAGAGCAACATTCTCCAATTGCAATTGAGCAGGAAGCATTTTTCACGAACTCCCCATTTCACGACGATGCCTATTTTAGAAATGAAAACATTATTACGCCAACTCCATTTGAAACTATTGAAGAGGAAAATGAGTTCATTAGTTCTATGTTAGTTGATGATGTTTTTGTTATCAACAAAGAAGATAAAGAACATGCTTTTGTCAACAGTTCTACCCAATCAAAATCATTGAAAAGGGTACACTATGAAAGCAGTGATACAGATGCTGAAGTAATCTCTGCCCTGGTAAAGATAAATTGTCCAAAGTCCAAATGA 978 0.3885 MKNIVPKLENVPIGFRFCPKDEELVDHYLRHKLLDDEIGVNIIPEIDLCKVDPWEVREKSKIKSEDPEWFFFSPVDYKYPKSKRVNRKTKGGFWKSTGNDRYIKVKGTNNVIGTKKTLVFYEGGVSDSVKSDWVIHEYHAVTFPESQRTFVLCRLMKKDGKRDERGTDALICDEAEPSRNMASDYENQVTSEGIADVGSTLPEMSMDTIFQAMQQAEIYFSQEQHSPIAIEQEAFFTNSPFHDDAYFRNENIITPTPFETIEEENEFISSMLVDDVFVINKEDKEHAFVNSSTQSKSLKRVHYESSDTDAEVISALVKINCPKSK* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1153 325 Pfam No apical meristem (NAM) protein 12 139 IPR003441 GO:0003677|GO:0006355
Apr10g1153 325 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 7 297 - -
Apr10g1153 325 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
Apr10g1153 325 SUPERFAMILY NAC domain 7 158 IPR036093 GO:0003677|GO:0006355
Apr10g1153 325 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 7 297 - -
Apr10g1153 325 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1153 Apr-Chr10 23761033 23764178 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1153 10 183 NAC Transcription Factor Family AT3G17730 46.369 1.37e-50 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr10g1153 NAM 1.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1153 - - aprc:113849171 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1153 10 23761033 23764178 Apr10g1153 10 23761033 23764178 ECH