Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1151 ATGGAGAACACAGTTCCCACGCTGGAAAACGTGCCTATAGGATTCAGATTTCGTCCAAAAGATGAAGAGCTAGTGGACCATTACCTCAGACACAAGTTGTTGGACGATGAAATCTGTGTGAACATCATCCCTGAGATTGACCTTTGCAAGGTGGATCCTTGGGAAGTGCCAGCAAAATCAAGCATAAAATCCGAAGACCCAGAATGGTTTTTCTTCAGTCCTGTTGATTACAAGTATTCAAATAGTAAAAGGGTTAACAGGACAACAAAGGGTGGGTTTTGGAAATCCACTGGAAATGAACGCTACATCAAGGAAAAAGGAACCAACAATGTCATTGGGACCAAGAAGACTCTTGTTTTCTATGAAGGCCGCGTTTCTCATAGTGTCAAGTCTAACTGGGTTATCCATGAATATCATCATGCTGTTACCTTTCTTGAAAGCCAGAGGACTTTCGTTTTATGTCGCTTGATGAAGAAAGATGGCAAAAAAGATGAAAAGGGAACTGATGCATGGATCTGTGATGAAGCTGATCCTAGTAGAAACATGGCTTCCAACTACGAAAATCAAGTAACATCTGAAGGAGTTGCAGATGTAGGAAGTACTTTGCCAGAAATGAGCATGGATACAATCTTTCCGGCGATGCAACAAGCAGAGAAATATTTCCCTCAAGAGCAACTTTCTCCGATTGCAATTGAGCAGAAAGCATCTTTCACAAACTCCCCATTTCACTACAATGCCTATTTTGAAAATGAAAACATTATTATACAAACTCCATTTGAAACTATTGAAGAGGAAAATGATTTCATTAGTTCTAGGTTAGTTGATGATGTTTTTGTTATCAACAAAGAAGATAAAGAATATGTTTTTGTCAACAGTTCTACACAATCAAAGTCATTGAAAAGAGTACACTGTAAAAGCAGTGAAGTGATACAGATGCTGAAGTAG 945 0.3884 MENTVPTLENVPIGFRFRPKDEELVDHYLRHKLLDDEICVNIIPEIDLCKVDPWEVPAKSSIKSEDPEWFFFSPVDYKYSNSKRVNRTTKGGFWKSTGNERYIKEKGTNNVIGTKKTLVFYEGRVSHSVKSNWVIHEYHHAVTFLESQRTFVLCRLMKKDGKKDEKGTDAWICDEADPSRNMASNYENQVTSEGVADVGSTLPEMSMDTIFPAMQQAEKYFPQEQLSPIAIEQKASFTNSPFHYNAYFENENIIIQTPFETIEEENDFISSRLVDDVFVINKEDKEYVFVNSSTQSKSLKRVHCKSSEVIQMLK* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1151 314 Gene3D NAC domain 20 164 IPR036093 GO:0003677|GO:0006355
Apr10g1151 314 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 7 250 - -
Apr10g1151 314 ProSiteProfiles NAC domain profile. 11 159 IPR003441 GO:0003677|GO:0006355
Apr10g1151 314 SUPERFAMILY NAC domain 7 159 IPR036093 GO:0003677|GO:0006355
Apr10g1151 314 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 7 250 - -
Apr10g1151 314 Pfam No apical meristem (NAM) protein 12 139 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1151 Apr-Chr10 23743938 23747055 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1151 7 159 NAC Transcription Factor Family AT4G35580 52.229 1.12e-52 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr10g1151 NAM 1.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1151 - - aprc:113849171 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1151 10 23743938 23747055 Apr10g1151 10 23743938 23747055 ECH