Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1147 ATGGCTTCCGCGTGTGCTTCATCTGCCATTACAGCCGTTGCAATCTCTACCCCAAGTTCTCAGAAGAATGGATCACTCTTGGGAACCACAAAAACTTCTTTTCTTAGTGGGAGGAAACTGAAGGTGAACACCTTCACAGCACCAGTTGGAGGACGATCCACCACTACAGTGTGTGCAGCTGCTGACCCTGACAGGCCTCTGTGGTTCCCTGGCAGCACCCCTCCTCCATGGCTAGATGGAAGCTTGCCAGGAGATTTTGGGTTTGATCCTCTTGGTCTTGGATCTGATCCTGAGACCCTGAGATGGAATGTTCAAGCAGAACTTGTGCACTGCAGATGGGCAATGTTGGGTGCTGCTGGCATTTTCATCCCAGAATTCCTAACAAAGATTGGTGTTCTGAACACCCCCTCATGGTACAGTGCTGGAGCGCAGGAATACTTCACAGACACTACCACACTGTTCATTGTTGAGCTCTTTTTCATTGGATGGGCTGAGGGTAGAAGGTGGGCTGATATCCTCAAGCCAGGATGTGTCAACACTGACCCTATCTTCCCCAACAACAAGCTCACAGGAACTGATGTTGGGTACCCAGGTGGGCTTTGGTTTGATCCACTTGGCTGGGGATCTGGTTCTCCTGAGAAGATCAAGGAGTTGAGAACAAAGGAGATCAAGAATGGGAGATTGGCCATGTTGGCTGTGATGGGAGCATGGTTCCAGCACATTTACACTGGCACTGGTCCTATTGACAACCTCTTTGCTCACCTTGCAGATCCTGGCCATGCTACTGTTTTTGCTGCTTTCACTTCCAAGTGA 813 0.4994 MASACASSAITAVAISTPSSQKNGSLLGTTKTSFLSGRKLKVNTFTAPVGGRSTTTVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPETLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGVLNTPSWYSAGAQEYFTDTTTLFIVELFFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTSK* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1147 270 Gene3D Chlorophyll a/b binding protein domain 75 260 - -
Apr10g1147 270 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 269 IPR001344 GO:0009765|GO:0016020
Apr10g1147 270 SUPERFAMILY Chlorophyll a-b binding protein 61 268 - -
Apr10g1147 270 Pfam Chlorophyll A-B binding protein 74 240 IPR022796 -
Apr10g1147 270 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC-RELATED 1 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1147 Apr-Chr10 23715635 23718065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1147 46 270 Chloroplast and Mitochondria Gene Families AT3G61470 86.283 4.78e-147 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1147 K08908 - gmx:100784089 528.094