Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1143 ATGACCAACCATCACTACAAAGACCCCATTTTCATCTCCTTGGTACCTACTTTTCTCATGCCACCAACATCTTCTTTTTCTGCGTATTCCATTCAAAGTTATTACATGGTTTCCAAGTTAATGGTATCTATCATAACACCTTTACTACTTCTTCTGTCCTTGTTTGTTGTTCAAGTCTCATCTTGTTACCAGATTGATAAACTCTCTCTCTTGGCTTTCTCTGAGAACATATCCACTTCTTCTCCTTACCCTTCTCTCAATTGGTCTGCTTCTGTTGATTGTTGCACTTGGGAAGGCATTACTTGTGATGGAGATCTCAGAGTCACACATCTTTTGCTACCATCTAGAGGCCTCACTGGCTTCGTCTCTCCCTCTATCACAAACCTCTCTTCTCTCTCTCACCTTAATCTCTCCCGTAACAGGTTATCTGGATACCTCCAAGATCAGTTTTTCTCATTGCTTAATCACTTGTTGGTTCTTGATTTGAGCTATAATCATCTCTCTGGTGAATTGCCACCCTTTGTTGCTGATAACAGTAGCAAAAGGAAAAATAGTAGTGGTGGTGGTGTTGTTATCCAGGAGGTGGATTTGTCTAGTAATTTTTTCAATGGAACACTTCCAAATTCTCTACTTGAGCACTTGGCAGCTGCAGCAGAAGGAGGGAGTTTGGTATCTTTCAATGTTAGTAATAACAGCTTCACAGGTCATATTCCTACTTCACTCTTTTGCATTAACGACCATAATTCATCCTCTCTCAGATTTTTGGACTATTCCTCCAATGATTTTGATGGTACCATTCAGCATGGACTAGGAGCATGTTCTAAGCTGGAGAAATTTAGAGCAGGTTTCAATTTCCTATCTGGGCCTATCCCAAGTGATATTTTTTATGCTGTTTCTCTCACAGAAATCTCATTACCCCTCAATAAACTCACTGGAAAAATTGGTGATGGCATTGTTGGCCTTACCAACCTCACAGTTTTGGAGCTCTACTCCAATCATTTCATAGGTTCCATTCCTCATGCTATTGGTAAACTCTCCAAGTTGGAAAGGCTACTCCTTCATGTCAACAATTTGACAGGTACTCTTCCACCATCTCTGATGAACTGTGACAATCTTGTGGTGTTGAATTTAAGGGTCAACCACTTGGAGGGAAATCTCTCAGCATTCAATTTCTCAGGATTCCTTACACTCACTACACTTGACCTTGGCAACAATTATTTTACTGGTGTTTTACCACCTACCCTTTATGCATGCAAGTCACTTTCAGCAGTAAGGCTAGCATCTAATCAGCTTGAGGGACAGATTTCACCTGAGATACTTGGACTTGAGTCCCTTTCATTCCTATCAATCTCTACTAACAAGCTGAGGAATGTCACTGGGGCTCTGAGAATACTCACAGGGCTCAAGAACCTTAGTACCCTTATGCTTTCCAAGAATTTTTTCAATGAAATGATACCAAAAGATGTGGACACAATAGACCCAGATGGATTCCAAAAACTTCAGGTTCTAGGCTTGGGTGGTTGTAATTTTACAGGTCAAATACCAGGCTGGCTTGTAAAGCTCAAGAAGCTTGAGGTCTTGGACCTGTCCTTTAATCAAATTAGTGGTTCAATCCCTCCTTGGTTGGGTACACTTCCTCAGCTTTTCTACATGGACTTGTCTGTTAACCTCCTCACAGGGACATTTCCCAAGAAGCTCACAAGACTCCCAGCACTGACATCACAACAGACAAATGATAAAGTAGAAAGGACTTACTTGGAGTTACCTGTCTTTGCTAATGCAAACAATGTTTCCTTACTGCAATATAATCAGCTTTCTAGCCTACCTCCAGCGATATATCTAGGAAACAATCACCTTAGTGGAAGTATCCCAATTGAGATTGGCCAACTGAAAGTCCTTCATCAGCTGGACCTGAAAAATAACAACTTCTTTGGCAATATACCAGTTCAGATTTCAAACTTGACTAATTTAGAGAAACTAGACCTCTCAGGGAACCAACTATCTGGTGAAATTCCTTATTCACTCAAAAGTTTGCATTTCTTGTCCTTTTTCAGTGTAGCATTCAATAATCTTCAGGGACAGATACCAACTGGTGGTCAATTTGATACTTTTTCCTACTCCAGCTTTGAAGGAAATCCACAGTTGTGTGGTCCAGTTATTCAGCGCTCTTGTCCTTCTCAACAAAATACTATTACTGTTAATGGTACTGCAGCTAGTCGCGGCTCGAACAAAAAAGTTATGATTGGACTTGTCATTGTAATCAGTTTTGGTATTGCTTCCTTGATAGCAGTTTTGACACTCTGGATACTCTCCAAGAGGAGGGTCAATCCAGGAGGAGAACCTGACAAGATTGAAATGGAATCAATTTCTGCCTACTCCAACAATGGAGTTCATCCTGAGGTTGACAAGGAGGCTAGCCTAGTGGTATTGTTCCCTAACAAAAATAATGAAACCAAGGACCTTACCATATTTGAAATCCTAAAAGCTACTGAAAATTTCAGTCAGGCAAAGATAATAGGATGTGGGGGTTTTGGTTTGGTTTATAAAGCAACATTACCAAATGGAACCACCCTAGCCATCAAGAAACTTTCAGGAGACTTGGGCCCTATGGAAAGGGAATTCAAAGCAGAGGTAGAGGCCTTGTCAACTGCACAACATGAGAATCTGGTGGCATTGCAAGGATACTGTGTGCATGATGGCTTTCGGCTTCTCATATATACTTACATGGAAAATGGAAGCCTGGATTACTGGTTGCATGAAAAGCCTGACGGTGCATCTCAACTTGATTGGCCAACTCGCTTGAAGATTGCACAAGGTGCAAGCTGTGGTTTGGCTTATTTGCATCAGATATGTGAACCACACATTGTGCATCGTGATATAAAGTCAAGCAATATACTCCTTGATGAAAAGTTTGAGGCACATGTTGCTGATTTTGGGTTGTCCAGGTTGATCCTTCCATATCATACTCATGTTACAACTGAACTTGTAGGTACATTAGGTTACATTCCCCCTGAGTATGGACAAGCATGGGTGGCTACTCTGAGAGGAGATGTGTACAGCTTTGGAGTTGTCATGCTTGAGCTACTCACTGGGAGGAGGCCTGTGGATGTATGCAAGCCAAAAATGTCAAGGGAGTTGGTTGGATGGGTTCAGCAGATGAAGAGTGAAGGAAAACAAGACCAAGTCTTTGACCCTCTTCTGAGAGGGAAAGGCTTTGAAGGAGAGATGCTGAAGGTACTTGATGTGGCTTGCATGTGTGTCAGCCATAATCCTTTCAAAAGACCAAGCATCAGAGAAGTTGTTGAATGGCTGAACAATGTAGGATCAGACAGCCAACAGAAATAA 3345 0.4149 MTNHHYKDPIFISLVPTFLMPPTSSFSAYSIQSYYMVSKLMVSIITPLLLLLSLFVVQVSSCYQIDKLSLLAFSENISTSSPYPSLNWSASVDCCTWEGITCDGDLRVTHLLLPSRGLTGFVSPSITNLSSLSHLNLSRNRLSGYLQDQFFSLLNHLLVLDLSYNHLSGELPPFVADNSSKRKNSSGGGVVIQEVDLSSNFFNGTLPNSLLEHLAAAAEGGSLVSFNVSNNSFTGHIPTSLFCINDHNSSSLRFLDYSSNDFDGTIQHGLGACSKLEKFRAGFNFLSGPIPSDIFYAVSLTEISLPLNKLTGKIGDGIVGLTNLTVLELYSNHFIGSIPHAIGKLSKLERLLLHVNNLTGTLPPSLMNCDNLVVLNLRVNHLEGNLSAFNFSGFLTLTTLDLGNNYFTGVLPPTLYACKSLSAVRLASNQLEGQISPEILGLESLSFLSISTNKLRNVTGALRILTGLKNLSTLMLSKNFFNEMIPKDVDTIDPDGFQKLQVLGLGGCNFTGQIPGWLVKLKKLEVLDLSFNQISGSIPPWLGTLPQLFYMDLSVNLLTGTFPKKLTRLPALTSQQTNDKVERTYLELPVFANANNVSLLQYNQLSSLPPAIYLGNNHLSGSIPIEIGQLKVLHQLDLKNNNFFGNIPVQISNLTNLEKLDLSGNQLSGEIPYSLKSLHFLSFFSVAFNNLQGQIPTGGQFDTFSYSSFEGNPQLCGPVIQRSCPSQQNTITVNGTAASRGSNKKVMIGLVIVISFGIASLIAVLTLWILSKRRVNPGGEPDKIEMESISAYSNNGVHPEVDKEASLVVLFPNKNNETKDLTIFEILKATENFSQAKIIGCGGFGLVYKATLPNGTTLAIKKLSGDLGPMEREFKAEVEALSTAQHENLVALQGYCVHDGFRLLIYTYMENGSLDYWLHEKPDGASQLDWPTRLKIAQGASCGLAYLHQICEPHIVHRDIKSSNILLDEKFEAHVADFGLSRLILPYHTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGRRPVDVCKPKMSRELVGWVQQMKSEGKQDQVFDPLLRGKGFEGEMLKVLDVACMCVSHNPFKRPSIREVVEWLNNVGSDSQQK* 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1143 1114 ProSiteProfiles Leucine-rich repeat profile. 523 546 IPR001611 GO:0005515
Apr10g1143 1114 Gene3D Ribonuclease Inhibitor 390 732 IPR032675 -
Apr10g1143 1114 SUPERFAMILY L domain-like 497 713 - -
Apr10g1143 1114 Gene3D Ribonuclease Inhibitor 296 389 IPR032675 -
Apr10g1143 1114 SMART LRR_typ_2 129 152 IPR003591 -
Apr10g1143 1114 SMART LRR_typ_2 154 178 IPR003591 -
Apr10g1143 1114 SMART LRR_typ_2 442 464 IPR003591 -
Apr10g1143 1114 SMART LRR_typ_2 654 677 IPR003591 -
Apr10g1143 1114 SMART LRR_typ_2 321 344 IPR003591 -
Apr10g1143 1114 SMART LRR_typ_2 345 369 IPR003591 -
Apr10g1143 1114 SMART LRR_typ_2 521 545 IPR003591 -
Apr10g1143 1114 Pfam Leucine rich repeat N-terminal domain 66 103 IPR013210 -
Apr10g1143 1114 SUPERFAMILY Protein kinase-like (PK-like) 818 1104 IPR011009 -
Apr10g1143 1114 ProSitePatterns Serine/Threonine protein kinases active-site signature. 955 967 IPR008271 GO:0004672|GO:0006468
Apr10g1143 1114 Gene3D Phosphorylase Kinase; domain 1 797 908 - -
Apr10g1143 1114 ProSiteProfiles Leucine-rich repeat profile. 656 679 IPR001611 GO:0005515
Apr10g1143 1114 ProSitePatterns Protein kinases ATP-binding region signature. 839 862 IPR017441 GO:0005524
Apr10g1143 1114 SUPERFAMILY L domain-like 88 572 - -
Apr10g1143 1114 Gene3D Transferase(Phosphotransferase) domain 1 909 1114 - -
Apr10g1143 1114 SMART serkin_6 833 1104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1143 1114 Pfam Protein tyrosine and serine/threonine kinase 836 1102 IPR001245 GO:0004672|GO:0006468
Apr10g1143 1114 PANTHER LEUCINE RICH REPEAT KINASE 2 45 1108 - -
Apr10g1143 1114 Gene3D Ribonuclease Inhibitor 64 216 IPR032675 -
Apr10g1143 1114 PRINTS Leucine-rich repeat signature 524 537 - -
Apr10g1143 1114 PRINTS Leucine-rich repeat signature 654 667 - -
Apr10g1143 1114 Pfam Leucine Rich Repeat 656 678 IPR001611 GO:0005515
Apr10g1143 1114 Gene3D Ribonuclease Inhibitor 217 295 IPR032675 -
Apr10g1143 1114 PANTHER OS06G0692500 PROTEIN 45 1108 - -
Apr10g1143 1114 Pfam Leucine rich repeat 499 558 IPR001611 GO:0005515
Apr10g1143 1114 ProSiteProfiles Protein kinase domain profile. 833 1104 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1143 Apr-Chr10 23688730 23692483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1143 41 773 Miscellaneous Gene Families AT1G17250 51.957 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Apr10g1143 PK_Tyr_Ser-Thr 3.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1143 - - gmx:100781943 1846.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1143 10 23688730 23692483 Apr10g1143 10 23688730 23692483 ECH