Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr10g1143 | ATGACCAACCATCACTACAAAGACCCCATTTTCATCTCCTTGGTACCTACTTTTCTCATGCCACCAACATCTTCTTTTTCTGCGTATTCCATTCAAAGTTATTACATGGTTTCCAAGTTAATGGTATCTATCATAACACCTTTACTACTTCTTCTGTCCTTGTTTGTTGTTCAAGTCTCATCTTGTTACCAGATTGATAAACTCTCTCTCTTGGCTTTCTCTGAGAACATATCCACTTCTTCTCCTTACCCTTCTCTCAATTGGTCTGCTTCTGTTGATTGTTGCACTTGGGAAGGCATTACTTGTGATGGAGATCTCAGAGTCACACATCTTTTGCTACCATCTAGAGGCCTCACTGGCTTCGTCTCTCCCTCTATCACAAACCTCTCTTCTCTCTCTCACCTTAATCTCTCCCGTAACAGGTTATCTGGATACCTCCAAGATCAGTTTTTCTCATTGCTTAATCACTTGTTGGTTCTTGATTTGAGCTATAATCATCTCTCTGGTGAATTGCCACCCTTTGTTGCTGATAACAGTAGCAAAAGGAAAAATAGTAGTGGTGGTGGTGTTGTTATCCAGGAGGTGGATTTGTCTAGTAATTTTTTCAATGGAACACTTCCAAATTCTCTACTTGAGCACTTGGCAGCTGCAGCAGAAGGAGGGAGTTTGGTATCTTTCAATGTTAGTAATAACAGCTTCACAGGTCATATTCCTACTTCACTCTTTTGCATTAACGACCATAATTCATCCTCTCTCAGATTTTTGGACTATTCCTCCAATGATTTTGATGGTACCATTCAGCATGGACTAGGAGCATGTTCTAAGCTGGAGAAATTTAGAGCAGGTTTCAATTTCCTATCTGGGCCTATCCCAAGTGATATTTTTTATGCTGTTTCTCTCACAGAAATCTCATTACCCCTCAATAAACTCACTGGAAAAATTGGTGATGGCATTGTTGGCCTTACCAACCTCACAGTTTTGGAGCTCTACTCCAATCATTTCATAGGTTCCATTCCTCATGCTATTGGTAAACTCTCCAAGTTGGAAAGGCTACTCCTTCATGTCAACAATTTGACAGGTACTCTTCCACCATCTCTGATGAACTGTGACAATCTTGTGGTGTTGAATTTAAGGGTCAACCACTTGGAGGGAAATCTCTCAGCATTCAATTTCTCAGGATTCCTTACACTCACTACACTTGACCTTGGCAACAATTATTTTACTGGTGTTTTACCACCTACCCTTTATGCATGCAAGTCACTTTCAGCAGTAAGGCTAGCATCTAATCAGCTTGAGGGACAGATTTCACCTGAGATACTTGGACTTGAGTCCCTTTCATTCCTATCAATCTCTACTAACAAGCTGAGGAATGTCACTGGGGCTCTGAGAATACTCACAGGGCTCAAGAACCTTAGTACCCTTATGCTTTCCAAGAATTTTTTCAATGAAATGATACCAAAAGATGTGGACACAATAGACCCAGATGGATTCCAAAAACTTCAGGTTCTAGGCTTGGGTGGTTGTAATTTTACAGGTCAAATACCAGGCTGGCTTGTAAAGCTCAAGAAGCTTGAGGTCTTGGACCTGTCCTTTAATCAAATTAGTGGTTCAATCCCTCCTTGGTTGGGTACACTTCCTCAGCTTTTCTACATGGACTTGTCTGTTAACCTCCTCACAGGGACATTTCCCAAGAAGCTCACAAGACTCCCAGCACTGACATCACAACAGACAAATGATAAAGTAGAAAGGACTTACTTGGAGTTACCTGTCTTTGCTAATGCAAACAATGTTTCCTTACTGCAATATAATCAGCTTTCTAGCCTACCTCCAGCGATATATCTAGGAAACAATCACCTTAGTGGAAGTATCCCAATTGAGATTGGCCAACTGAAAGTCCTTCATCAGCTGGACCTGAAAAATAACAACTTCTTTGGCAATATACCAGTTCAGATTTCAAACTTGACTAATTTAGAGAAACTAGACCTCTCAGGGAACCAACTATCTGGTGAAATTCCTTATTCACTCAAAAGTTTGCATTTCTTGTCCTTTTTCAGTGTAGCATTCAATAATCTTCAGGGACAGATACCAACTGGTGGTCAATTTGATACTTTTTCCTACTCCAGCTTTGAAGGAAATCCACAGTTGTGTGGTCCAGTTATTCAGCGCTCTTGTCCTTCTCAACAAAATACTATTACTGTTAATGGTACTGCAGCTAGTCGCGGCTCGAACAAAAAAGTTATGATTGGACTTGTCATTGTAATCAGTTTTGGTATTGCTTCCTTGATAGCAGTTTTGACACTCTGGATACTCTCCAAGAGGAGGGTCAATCCAGGAGGAGAACCTGACAAGATTGAAATGGAATCAATTTCTGCCTACTCCAACAATGGAGTTCATCCTGAGGTTGACAAGGAGGCTAGCCTAGTGGTATTGTTCCCTAACAAAAATAATGAAACCAAGGACCTTACCATATTTGAAATCCTAAAAGCTACTGAAAATTTCAGTCAGGCAAAGATAATAGGATGTGGGGGTTTTGGTTTGGTTTATAAAGCAACATTACCAAATGGAACCACCCTAGCCATCAAGAAACTTTCAGGAGACTTGGGCCCTATGGAAAGGGAATTCAAAGCAGAGGTAGAGGCCTTGTCAACTGCACAACATGAGAATCTGGTGGCATTGCAAGGATACTGTGTGCATGATGGCTTTCGGCTTCTCATATATACTTACATGGAAAATGGAAGCCTGGATTACTGGTTGCATGAAAAGCCTGACGGTGCATCTCAACTTGATTGGCCAACTCGCTTGAAGATTGCACAAGGTGCAAGCTGTGGTTTGGCTTATTTGCATCAGATATGTGAACCACACATTGTGCATCGTGATATAAAGTCAAGCAATATACTCCTTGATGAAAAGTTTGAGGCACATGTTGCTGATTTTGGGTTGTCCAGGTTGATCCTTCCATATCATACTCATGTTACAACTGAACTTGTAGGTACATTAGGTTACATTCCCCCTGAGTATGGACAAGCATGGGTGGCTACTCTGAGAGGAGATGTGTACAGCTTTGGAGTTGTCATGCTTGAGCTACTCACTGGGAGGAGGCCTGTGGATGTATGCAAGCCAAAAATGTCAAGGGAGTTGGTTGGATGGGTTCAGCAGATGAAGAGTGAAGGAAAACAAGACCAAGTCTTTGACCCTCTTCTGAGAGGGAAAGGCTTTGAAGGAGAGATGCTGAAGGTACTTGATGTGGCTTGCATGTGTGTCAGCCATAATCCTTTCAAAAGACCAAGCATCAGAGAAGTTGTTGAATGGCTGAACAATGTAGGATCAGACAGCCAACAGAAATAA | 3345 | 0.4149 | MTNHHYKDPIFISLVPTFLMPPTSSFSAYSIQSYYMVSKLMVSIITPLLLLLSLFVVQVSSCYQIDKLSLLAFSENISTSSPYPSLNWSASVDCCTWEGITCDGDLRVTHLLLPSRGLTGFVSPSITNLSSLSHLNLSRNRLSGYLQDQFFSLLNHLLVLDLSYNHLSGELPPFVADNSSKRKNSSGGGVVIQEVDLSSNFFNGTLPNSLLEHLAAAAEGGSLVSFNVSNNSFTGHIPTSLFCINDHNSSSLRFLDYSSNDFDGTIQHGLGACSKLEKFRAGFNFLSGPIPSDIFYAVSLTEISLPLNKLTGKIGDGIVGLTNLTVLELYSNHFIGSIPHAIGKLSKLERLLLHVNNLTGTLPPSLMNCDNLVVLNLRVNHLEGNLSAFNFSGFLTLTTLDLGNNYFTGVLPPTLYACKSLSAVRLASNQLEGQISPEILGLESLSFLSISTNKLRNVTGALRILTGLKNLSTLMLSKNFFNEMIPKDVDTIDPDGFQKLQVLGLGGCNFTGQIPGWLVKLKKLEVLDLSFNQISGSIPPWLGTLPQLFYMDLSVNLLTGTFPKKLTRLPALTSQQTNDKVERTYLELPVFANANNVSLLQYNQLSSLPPAIYLGNNHLSGSIPIEIGQLKVLHQLDLKNNNFFGNIPVQISNLTNLEKLDLSGNQLSGEIPYSLKSLHFLSFFSVAFNNLQGQIPTGGQFDTFSYSSFEGNPQLCGPVIQRSCPSQQNTITVNGTAASRGSNKKVMIGLVIVISFGIASLIAVLTLWILSKRRVNPGGEPDKIEMESISAYSNNGVHPEVDKEASLVVLFPNKNNETKDLTIFEILKATENFSQAKIIGCGGFGLVYKATLPNGTTLAIKKLSGDLGPMEREFKAEVEALSTAQHENLVALQGYCVHDGFRLLIYTYMENGSLDYWLHEKPDGASQLDWPTRLKIAQGASCGLAYLHQICEPHIVHRDIKSSNILLDEKFEAHVADFGLSRLILPYHTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGRRPVDVCKPKMSRELVGWVQQMKSEGKQDQVFDPLLRGKGFEGEMLKVLDVACMCVSHNPFKRPSIREVVEWLNNVGSDSQQK* | 1115 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr10g1143 | 1114 | ProSiteProfiles | Leucine-rich repeat profile. | 523 | 546 | IPR001611 | GO:0005515 | |
Apr10g1143 | 1114 | Gene3D | Ribonuclease Inhibitor | 390 | 732 | IPR032675 | - | |
Apr10g1143 | 1114 | SUPERFAMILY | L domain-like | 497 | 713 | - | - | |
Apr10g1143 | 1114 | Gene3D | Ribonuclease Inhibitor | 296 | 389 | IPR032675 | - | |
Apr10g1143 | 1114 | SMART | LRR_typ_2 | 129 | 152 | IPR003591 | - | |
Apr10g1143 | 1114 | SMART | LRR_typ_2 | 154 | 178 | IPR003591 | - | |
Apr10g1143 | 1114 | SMART | LRR_typ_2 | 442 | 464 | IPR003591 | - | |
Apr10g1143 | 1114 | SMART | LRR_typ_2 | 654 | 677 | IPR003591 | - | |
Apr10g1143 | 1114 | SMART | LRR_typ_2 | 321 | 344 | IPR003591 | - | |
Apr10g1143 | 1114 | SMART | LRR_typ_2 | 345 | 369 | IPR003591 | - | |
Apr10g1143 | 1114 | SMART | LRR_typ_2 | 521 | 545 | IPR003591 | - | |
Apr10g1143 | 1114 | Pfam | Leucine rich repeat N-terminal domain | 66 | 103 | IPR013210 | - | |
Apr10g1143 | 1114 | SUPERFAMILY | Protein kinase-like (PK-like) | 818 | 1104 | IPR011009 | - | |
Apr10g1143 | 1114 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 955 | 967 | IPR008271 | GO:0004672|GO:0006468 | |
Apr10g1143 | 1114 | Gene3D | Phosphorylase Kinase; domain 1 | 797 | 908 | - | - | |
Apr10g1143 | 1114 | ProSiteProfiles | Leucine-rich repeat profile. | 656 | 679 | IPR001611 | GO:0005515 | |
Apr10g1143 | 1114 | ProSitePatterns | Protein kinases ATP-binding region signature. | 839 | 862 | IPR017441 | GO:0005524 | |
Apr10g1143 | 1114 | SUPERFAMILY | L domain-like | 88 | 572 | - | - | |
Apr10g1143 | 1114 | Gene3D | Transferase(Phosphotransferase) domain 1 | 909 | 1114 | - | - | |
Apr10g1143 | 1114 | SMART | serkin_6 | 833 | 1104 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr10g1143 | 1114 | Pfam | Protein tyrosine and serine/threonine kinase | 836 | 1102 | IPR001245 | GO:0004672|GO:0006468 | |
Apr10g1143 | 1114 | PANTHER | LEUCINE RICH REPEAT KINASE 2 | 45 | 1108 | - | - | |
Apr10g1143 | 1114 | Gene3D | Ribonuclease Inhibitor | 64 | 216 | IPR032675 | - | |
Apr10g1143 | 1114 | PRINTS | Leucine-rich repeat signature | 524 | 537 | - | - | |
Apr10g1143 | 1114 | PRINTS | Leucine-rich repeat signature | 654 | 667 | - | - | |
Apr10g1143 | 1114 | Pfam | Leucine Rich Repeat | 656 | 678 | IPR001611 | GO:0005515 | |
Apr10g1143 | 1114 | Gene3D | Ribonuclease Inhibitor | 217 | 295 | IPR032675 | - | |
Apr10g1143 | 1114 | PANTHER | OS06G0692500 PROTEIN | 45 | 1108 | - | - | |
Apr10g1143 | 1114 | Pfam | Leucine rich repeat | 499 | 558 | IPR001611 | GO:0005515 | |
Apr10g1143 | 1114 | ProSiteProfiles | Protein kinase domain profile. | 833 | 1104 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr10g1143 | Apr-Chr10 | 23688730 | 23692483 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr10g1143 | 41 | 773 | Miscellaneous Gene Families | AT1G17250 | 51.957 | 0.0 | 660 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-Xb-1 | Apr10g1143 | PK_Tyr_Ser-Thr | 3.1e-39 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr10g1143 | - | - | gmx:100781943 | 1846.63 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Apr10g1143 | 10 | 23688730 | 23692483 | Apr10g1143 | 10 | 23688730 | 23692483 | ECH |