Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1140 ATGATGTTGGATCCAAGGCTGGTGCTGATGTTTATCATCATCAGCACCTGCATTCTGGTCATCTATGGTGATACAGATCCAAATGATGCTGCTTCTCTAAAGAATATGTTTCAAAGTATGAACTCACCACCCCAGCTAAATTGGAATGGCGATGATCCTTGTGGACAGTCTTGGAAAGGCATTACTTGCTCAGGCAACCGAGTCACAGAGATAAAGTTGCCTGGCCTTGGACTAACTGGATCTATGGGTTACCAGCTACAATCCTTGACATCTGCAACAATTCTGGACCTGAGTAACAACAATCTTGGTGCCACCATACCATACCAACTTCCTCCTAATTTGCAGCACTTAAATCTTGCTAATAATAACTTTAATGGGGGAATCCCTTATTTTATTTCTACTATGTCTTCGCTTATAGACCTGAATCTTGGTCACAATCAGCTCCAGCAAGGACTCACTGTCGACTTTCAAAAGCTTTCTTCCCTCTCAACGTTGGATCTCTCGTTCAATTCTTTCACAGGTGATCTCCCTCAGACTTTGAGTTCACTTTCAAGCATAAGCACCATGTATCTGCAGAACAACCAGTTTACAGGCACCATTGATGTCCTTGCTAATTTGCCTCTCGACATTCTGAATGTGGAAAACAATCATTTTACAGGCTGGATACCAGAACAATTGAAAAGCATAAACCTACAAAAGGATGGTAATGCATGGAACTCGGGACCTGCACCTCCACCTCCTCCTGGGACACCTCCAATAACACCAAGAAACCGAAATCACAAATCTGGTGGACATAGCCCATCAGATGCTGGCACAAGTGACGGAGGAAGCAAAAAATCTGGTATAGGAGGCGGGGGAGTTGCTGGAATTGTGATCTCAATCTTGGTTGTTGGGGCAATAGTAGCATTTTTTCTGGTGAAAAGAAGATCCAAAAAGTCATTTAAAGATATTGAAAAGCTTGACAATCAGCCCCTGGCTCCTCTTTCTTCAAATGAAGTGCACGAAATGAATTCCATGCAAGCTTCGTCTGTAATTGACTTGAAGTCATTTGATACATCTGCGGCCTCGCTAAACCTTAAACCTCCACCTTTTGATCGTCGTAAATCATTTGACGAGGATGAATTTTCAAAAAAGCCCGCTATAGTCAATAGTAGGCCCACTACAGTCAAGAAGACTGTAAAAGCTCCTGAAAATGTAAAATCATATTCTATAGCTGACCTGCAGATTGCTACTGGAAGCTTTAGTGTGGATCAACTTCTTGGTGAGGGGACTTTTGGACGGGTGTACCGTGCTCAATTTGATGATGGAAAGGTTCTTGCTGTGAAGAAGATAGATTCTTCTGTTCTTCCCAATGATTTGTCTGACGATTTTGTAGAAATGGTTTCAAACATATCCCATTTGAATCATCCCAATGTGACAGAACTACCTGATGAGTATAGTAAACCATTGATATGGAATTCACGTGTCAAGATTGCTTTGGGGATTGCACGAGCTTTAGAGTACCTACATGAAGTTTGTTCACCTTCAATTGTTCATAAGAATATAAAGTCAGCCAACATATTGCTTGATTCAGATCTTAATCCTCATCTGTCCGACAGTGGATTGGCAAGCTATATTCCAAATGCAAACCAGGTATTGAACAACAATTCTGGATCTGGATATGAAGCTCCTGAAGTTGGCTTGTCTGGTCATTATACTCTTAAGAGTGATGTCTACAGCTTTGGAGTTGTCATGTTGGAACTTCTTAGTGGACGAAAACCATTTGATAGCTCAAGGCCAAGGTTTGAGCAGTCTTTGGTTCGGTGGGCAACACCTCAACTTCATGATATTGATGCTTTGGCTAAAATGGTTGATCCTGCATTGGAAGGACTATACCCTGTTAAGTCTCTTTCTCGATTTGCTGATGTTATAGCTCTTTGTGTTCAGCCGGAGCCTGAATTCCGACCACCTATGTCCGAAGTGGTTCAAGCGCTGGTTCGGTTAGTGCAGCGAACTAACATGAGCAAGCGAACATTTGGAACTGATCAAGGAGGATCCAACCGTGGGGGTGATAACCAAGAAACACAAGACATGTAA 2076 0.4229 MMLDPRLVLMFIIISTCILVIYGDTDPNDAASLKNMFQSMNSPPQLNWNGDDPCGQSWKGITCSGNRVTEIKLPGLGLTGSMGYQLQSLTSATILDLSNNNLGATIPYQLPPNLQHLNLANNNFNGGIPYFISTMSSLIDLNLGHNQLQQGLTVDFQKLSSLSTLDLSFNSFTGDLPQTLSSLSSISTMYLQNNQFTGTIDVLANLPLDILNVENNHFTGWIPEQLKSINLQKDGNAWNSGPAPPPPPGTPPITPRNRNHKSGGHSPSDAGTSDGGSKKSGIGGGGVAGIVISILVVGAIVAFFLVKRRSKKSFKDIEKLDNQPLAPLSSNEVHEMNSMQASSVIDLKSFDTSAASLNLKPPPFDRRKSFDEDEFSKKPAIVNSRPTTVKKTVKAPENVKSYSIADLQIATGSFSVDQLLGEGTFGRVYRAQFDDGKVLAVKKIDSSVLPNDLSDDFVEMVSNISHLNHPNVTELPDEYSKPLIWNSRVKIALGIARALEYLHEVCSPSIVHKNIKSANILLDSDLNPHLSDSGLASYIPNANQVLNNNSGSGYEAPEVGLSGHYTLKSDVYSFGVVMLELLSGRKPFDSSRPRFEQSLVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRTNMSKRTFGTDQGGSNRGGDNQETQDM* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1140 691 MobiDBLite consensus disorder prediction 669 691 - -
Apr10g1140 691 ProSiteProfiles Protein kinase domain profile. 414 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1140 691 MobiDBLite consensus disorder prediction 233 280 - -
Apr10g1140 691 Pfam Protein kinase domain 490 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1140 691 PANTHER OS01G0253100 PROTEIN 477 688 IPR045271 GO:0004714|GO:0006468
Apr10g1140 691 PANTHER OS01G0253100 PROTEIN 21 475 IPR045271 GO:0004714|GO:0006468
Apr10g1140 691 MobiDBLite consensus disorder prediction 240 254 - -
Apr10g1140 691 MobiDBLite consensus disorder prediction 255 275 - -
Apr10g1140 691 Gene3D Transferase(Phosphotransferase) domain 1 473 679 - -
Apr10g1140 691 ProSitePatterns Protein kinases ATP-binding region signature. 420 443 IPR017441 GO:0005524
Apr10g1140 691 Pfam Leucine rich repeat 112 171 IPR001611 GO:0005515
Apr10g1140 691 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 21 475 - -
Apr10g1140 691 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 477 688 - -
Apr10g1140 691 SUPERFAMILY Protein kinase-like (PK-like) 395 658 IPR011009 -
Apr10g1140 691 SUPERFAMILY L domain-like 44 226 - -
Apr10g1140 691 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Apr10g1140 691 Gene3D Phosphorylase Kinase; domain 1 376 472 - -
Apr10g1140 691 Gene3D Ribonuclease Inhibitor 29 137 IPR032675 -
Apr10g1140 691 Gene3D Ribonuclease Inhibitor 141 241 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1140 Apr-Chr10 23656090 23664736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1140 2 671 Strubbelig Receptor Gene Family AT3G14350 66.035 0.0 809
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Apr10g1140 Pkinase 1.1e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1140 - - gmx:100780323 1117.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1140 10 23656090 23664736 Apr10g1140 10 23656090 23664736 ECH