Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1123 ATGGAGAATCGGAAGACATCGGCATACTATGAGAACAGATTGGCGCACTTTGGAGTAGTGAGCAGAGAGTGGCTCGCGCAAGCGGAGTCTGCCACCCATCCACATCCACATCATCATGACCCTCATCATGATGACCATGACATACATAACGACAACAAACCCTTCTCCGTCATCGATGAGTTCAATAGATGGCGCAAACACCCCGATTTGGCCGAGGCCGTCGCCGCCATTCGCGCCCTCGCCGCCGTCATCCACTCCAGCAAGGCCACCACCATGATGCAACTCGAAATCCAACTCAAAAACGCCTCCGATTCTCTCAAAAATTGGGATACAACCTCGATTTCGTTGACGGCAGGGTGCGATTTGTTCATGCGATATGTGACGAGGACTTCCGCTTTGGAATACGAAGATTTCAATTCAGCGAAGTCGCGCTTAATTGAACGCGCCGAGAAGTTTGGGGAAATCTCGTACAAGGCTCGTAAAATTATTGCAATGCTGAGTCAGGATTTTATCTTTGATGGTTGTACGATTTTGGTTCATGGTTTCTCCAGAGTTGTCTTTGAAGTTCTCAAACTCGCTGCACAAAATAACAAACTTTTTCGAGTCTTCTGCACAGATGGTGTTGTTGAAAGTGGTGGTATAATCAACATGATGGGGACATACCAAATTGCTTTGGTTGCTAAGAGTATGAATAAACCAGTTTATGTGGCAGCTGAAAGCTACAAGTTTGCGCGTCTTTACCCTCTGGACCAAAAGGATTTGGCCCCTGCATTGCGCCCAGTTGATTTCGGTGTACCTATTCCATCCAAGGTTGAGGTTGAATGTTCTGCCCGGGATTATACTCCTCCTCAATATCTGACTCTGCTTTTCACAGATTTAGGTGTTCTTACTCCATCTGTTGTCAGTGATGAGCTCATCCAGCTGTACTTGTAG 933 0.4684 MENRKTSAYYENRLAHFGVVSREWLAQAESATHPHPHHHDPHHDDHDIHNDNKPFSVIDEFNRWRKHPDLAEAVAAIRALAAVIHSSKATTMMQLEIQLKNASDSLKNWDTTSISLTAGCDLFMRYVTRTSALEYEDFNSAKSRLIERAEKFGEISYKARKIIAMLSQDFIFDGCTILVHGFSRVVFEVLKLAAQNNKLFRVFCTDGVVESGGIINMMGTYQIALVAKSMNKPVYVAAESYKFARLYPLDQKDLAPALRPVDFGVPIPSKVEVECSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1123 310 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 7 207 - -
Apr10g1123 310 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 206 310 - -
Apr10g1123 310 Pfam Initiation factor 2 subunit family 205 298 IPR000649 GO:0044237
Apr10g1123 310 SUPERFAMILY NagB/RpiA/CoA transferase-like 41 309 IPR037171 -
Apr10g1123 310 Gene3D - 53 155 IPR042528 -
Apr10g1123 310 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 206 310 - -
Apr10g1123 310 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 7 207 - -
Apr10g1123 310 Coils Coil 92 112 - -
Apr10g1123 310 Gene3D - 158 206 IPR042529 -
Apr10g1123 310 Gene3D - 207 310 IPR042529 -
Apr10g1123 310 MobiDBLite consensus disorder prediction 29 51 - -
Apr10g1123 310 MobiDBLite consensus disorder prediction 32 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1123 Apr-Chr10 23534929 23537546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1123 7 310 Eukaryotic Initiation Factors Gene Family AT1G53880 70.402 3.42e-165 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1123 K03239 - gmx:102669842 490.345