Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1105 ATGGCCAAAGTTGGAAGACTAACAAAGCTCAAGTCAGCGATCAAAAGGTGGCCCTCATTGACCAAACTCAGCCGCAACAACAGCACTGCCTCCTCCAACAAAGAAGCCACTTACTCCTCCAAAGAACATGAACATGAACATGAACAAGATCTTCATGCGGTCTATGTTGGCAAGTCTCGAAGGAGGTACCTCGTAAACTCCGAAGTCATTGATCATCCTGTGTTTCAAGAGCTAGTGGATAAGTCGTCTTCTAATGGATGTAATGATGGAGTTGTGGTTTCTTGTGAGGTGGTTCTGTTTGAGCACTTGTTGTGGATGCTTGAGAGTGCTGAGACTGAGACCCAGTTGGGGTCCATGGATGAGCTGGTTGAGTTCTACTCCTGTGCATGCTGA 393 0.4682 MAKVGRLTKLKSAIKRWPSLTKLSRNNSTASSNKEATYSSKEHEHEHEQDLHAVYVGKSRRRYLVNSEVIDHPVFQELVDKSSSNGCNDGVVVSCEVVLFEHLLWMLESAETETQLGSMDELVEFYSCAC* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1105 130 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 128 IPR003676 GO:0009733
Apr10g1105 130 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR78 4 128 - -
Apr10g1105 130 Pfam Auxin responsive protein 15 107 IPR003676 GO:0009733
Apr10g1105 130 MobiDBLite consensus disorder prediction 24 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1105 Apr-Chr10 23385698 23386929 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1105 1 109 Calmodulin-binding Proteins AT3G43120 22.059 1.03e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1105 - - gmx:100797158 194.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1105 10 23385698 23386929 Apr10g1105 10 23385698 23386929 ECH