Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1104 ATGGGAGCGATACTAAGCAAGTTGAGGAAATGGGTGAGTGGTGGCAGTGCTTTTAAGACCATAGAGAGGCCTTTGTTGACACCTAAAGGTTATGTTCCAATTTGTGTTGGCACAAATGAAGATACTTGCAAGCGATTTATGGTTCACATCAGAACACTTAGTGATGATTATTTCTGCGAGTTGTTGGGTAGGTCAGCTGATGAATATGGGTTTAGGAATGAAGGGGTTCTGAGGATCCCATTTGAAGCACAAGATTTTGAAGAGTGGTTGATCAAAAGGTCCAATGAAAAGATCAAGATTAAGAGGAGGGTAATAAAACCAATTTGA 327 0.4037 MGAILSKLRKWVSGGSAFKTIERPLLTPKGYVPICVGTNEDTCKRFMVHIRTLSDDYFCELLGRSADEYGFRNEGVLRIPFEAQDFEEWLIKRSNEKIKIKRRVIKPI* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1104 108 Pfam Auxin responsive protein 27 90 IPR003676 GO:0009733
Apr10g1104 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 99 IPR003676 GO:0009733
Apr10g1104 108 PANTHER SMALL AUXIN-UP RNA-RELATED 4 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1104 Apr-Chr10 23380995 23381321 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1104 14 90 Calmodulin-binding Proteins AT2G24400 36.145 7.13e-09 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1104 K14488 - gmx:102666083 148.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1104 10 23380995 23381321 Apr10g1104 10 23380995 23381321 ECH