Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1099 ATGGACGACGACGACGAGATCCAGTCGCATCCGTCGCCGGCGAGCGGATCCCCGGCTTCTTCGCCGAGGGCCAACGGTCGGATTACGGTGACGGTAGCGGCTCCGGCGCCGCAGACGCAGCCGGCGCCGAACAGCTTGGCATTAGCGCTTCCGATTCAGCAGCAGCCGAAGGGAAACGGCGGCGGAGGAGGGGGAAGGGAGGATTGTTGGAGCGAAGGCGCGACGGCAGTGCTGATCGACGCGTGGGGAGAGAGGTATCTAGAACTTAGCAGAGGAAATCTGAAGCAGAAGCACTGGAAGGAGGTGGCGGAGATCGTGAGCGGCAGAGAGGATTACACCAAGGCACCGAAGACCGACATCCAGTGTAAGAACCGGATCGACACCGTGAAAAAGAAGTACAAATCGGAGAAAGCGAAGATCGCCGCCGGCGCAACTAGTAAATGGCCGTTCTTCGAGAGATTGGACCAGTTGATCGGTCCCACCGCCAAGATCCCCGGCGCCGCCGGCACCAGCGCCGTCGGAAACAGTAATTTGCCGCTGCAGAAAGTTCCGTTAGCGATTCCCGTAGGAGGTCGAGGCGGCGCGAATCAGTTCCATCCTCAAAAGCAACAGCAGCAACAACCGCAACAGGTTCAGTTAAAGAACCAGAAGATTCAGTTCCGGCGGCGCGCTCCTCCGGTGGATTCCGATTCGTCGGAAAGAGAACCGCCGTCTCCGGTGTCGAGCGACAGTTTTCCGCCGGAGAGTTACGAGAGGAAGAGGCCGAGAGTGATGAATTCAAACGCCGTGAAGGGAAAGGAAGGTGGAAAAAAAGGAAAAGGTTGGGGAAGTGCGGTTAGGGAATTGACGCAGGCGATTCTCAAGTTTGGAGAAGCTTATGAACAAGCTGAGAGTTCGAAGCTGCAGCAGGTGGTGGAGATGGAGAAGCAGAGGATGAAATTCGCTAAGGATTTGGAGTTGCAGAGAATGCAGTTTTTCATGAAGACTCAGTTGGAGATTTCGCAGCTCAAGCTGGAGAGAAAAGGTGGTAACCCTAGCAATCACCATAGCACCACCACCCCCAACAACAACAATAACAACCATCATAACAATAATAGTGACAGTGAGTGA 1110 0.5541 MDDDDEIQSHPSPASGSPASSPRANGRITVTVAAPAPQTQPAPNSLALALPIQQQPKGNGGGGGGREDCWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVAEIVSGREDYTKAPKTDIQCKNRIDTVKKKYKSEKAKIAAGATSKWPFFERLDQLIGPTAKIPGAAGTSAVGNSNLPLQKVPLAIPVGGRGGANQFHPQKQQQQQPQQVQLKNQKIQFRRRAPPVDSDSSEREPPSPVSSDSFPPESYERKRPRVMNSNAVKGKEGGKKGKGWGSAVRELTQAILKFGEAYEQAESSKLQQVVEMEKQRMKFAKDLELQRMQFFMKTQLEISQLKLERKGGNPSNHHSTTTPNNNNNNHHNNNSDSE* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1099 369 MobiDBLite consensus disorder prediction 10 52 - -
Apr10g1099 369 MobiDBLite consensus disorder prediction 184 277 - -
Apr10g1099 369 Pfam Myb/SANT-like DNA-binding domain 67 157 IPR044822 -
Apr10g1099 369 MobiDBLite consensus disorder prediction 337 369 - -
Apr10g1099 369 MobiDBLite consensus disorder prediction 247 274 - -
Apr10g1099 369 Gene3D - 70 135 - -
Apr10g1099 369 MobiDBLite consensus disorder prediction 1 70 - -
Apr10g1099 369 MobiDBLite consensus disorder prediction 345 369 - -
Apr10g1099 369 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 1 337 - -
Apr10g1099 369 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 1 337 IPR044823 -
Apr10g1099 369 MobiDBLite consensus disorder prediction 197 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1099 Apr-Chr10 23354882 23356563 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1099 1 350 Trihelix Transcription Factor Family AT3G14180 48.853 5.08e-106 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Apr10g1099 Myb_DNA-bind_4 4.3e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1099 - - gmx:100812599 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1099 10 23354882 23356563 Apr10g1099 10 23354882 23356563 ECH