Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1087 ATGGCCATAGCTCAGGCAATAATTCACCCAATTTTCTTCGTCATAATCCTTATCATCATAACTTTCCCTGTGATACATTCCATGTCAGAAACCGAAGCTTTGTTGAGTCTCAAAAACTCGTTGTCCAATACACAAGCTTTGGATAGTTGGGTGGCTGATTCTGTGCCTTGCACTGAAGATGATCAATGGGAAGGTGTTTTTTGCTACAATGGCATTGTCTCGGGGCTTCGCCTTGGAGGAATGGGGTTATTAGGAGATATAGATGTTAATGCATTGCTTGAACTCAAGGGTCTTCGAACTATTAGCCTTGTCAACAACTCTTTCTCAGGTTCCATACCACAGTTCAACCGAATAGGTTTCTTGAAAGCCATATATTTGTCAGGAAACAAGTTTTCTGGGGACATTCCTCAAGAATACTTCAAGGGAATGAGGTCTTTGAAGAAGTTGTTGCTTTCTGACAACCAATTCACGGGTCATATTCCATCATCATTGGCTGAGATTCCTCAGCTTATGGTGTTGCATCTTGAGAACAACCAGTTTAGTGGAAGTATTCCTGATTTGAATAACCCATCATTGGTGCAACTCAATTTGTCCAACAACAATCTAGAGGGTAAAGTTCCAGCTAGTTTGTTGAAATTCAACGAGAGTTCTTTTGGTGGAAATCCGGGTCTTTGTGGTAACATGTTTGGTAGAACGTGTGAACTTGTTGATGAACGAAGTAATGCAGGATTGAGCAATGTTGCGGGTAATGTGTCTGAGCCAAATAGGAGTAGGAGTAGCATGTTGGAGATTGTTGTCTTTGTGGTGGCTAGTGTAGTGATTGTCTCACTTATTGTCTTTTTAATTGTGAGATCGAGGAGAAAGAAGAATGAGGATGTTGATATGATTAGTGCAGTGGAGGTTCAGGTAGCTGCTGCACCAGTGAAAAGGGACGTGGATACATCAGTTAAAAAAGCATCATCAAGCAGAAGGGGAGGATCCAGTCATGGTAAGGGCGTTGGAGAGGTTGTGATGGTGAACAGCGAGAAGGGTGTGTTTGGATTACCAGATTTGATGAGGGCAGCGGCTGAAGTGCTAGGAAATGGAGGGCTTGGATCTTCTTATAAGGCTGTGATGGCTAATGGAGTGGCTGTGGTTGTGAAAAGGATAAGAGATATGAATATATTGGAAAAAGATGGTTTTGATGCAGAGATGAGGAAGCTAGGAAAGCTCAAACACTGGAATATCTTGACCCCTTTAGCTTATCATTACAGAAAGGAAGAGAAACTAGTGATCTCTGAGTATGTTCCCGGAGGCAGTCTAATGTATTTGCTGCATGGTGATAAGGGTCCATCCCATGCTGAACTAGATTGGCCGGCACGTTTGAATATTGTTCAAGGAATTGCTGAAGGGATGCGTTATCTTCTCACAAATTTTGCTTCTTCTGATCTACCACATGGCAACCTCAAGTCCAGCAATATACTCCTTGGACCAGATTATGATCCACTGCTTGTAGATTATGGGTTTAGCCATATGGCCAACCCTTCAAGTGTTGCACAAACACTATTTGCTTACAAGGCACCTGAAGCAGCACAAGGCCAAATTTCACCTAGTTGTGATGTTTACTGCCTTGGAGTTGTAATACTTGAGATACTCACTGGGAAATACCCTTCTCAATATCTTAGCAATGGCAAGGGTGGAACTGATGTAGTGCAATGGGTTGCAACAGCAATCTCTGAGGGAAGGGAAGCAGAACTACTTGATCCTGAAATTGCAAGCTCTAGGAATTCACTAGGTGAAATGGTGCAACTCCTTCACATTGGTGCTGCTTGCACTCAAAGCAACCCTCAGGAACGGTTAGATATGGTGGAAGGTATTAGAAGAATAGAGGAGATTAAAACCAATGGTGGCCTAGAATCAAGAACAATAGAGGTCTTGCCATCTCTTAGAGATGGCTATGCAGACTCTCATGTATGTGAGAGCCAAGAAAATGGTGACCAATCAAGGACAAGGAGTAGACATGGAACAAACAGCTTTGGAAGCCAGGGTAATTTTGAATTTGGCATCTCCTAG 2052 0.4269 MAIAQAIIHPIFFVIILIIITFPVIHSMSETEALLSLKNSLSNTQALDSWVADSVPCTEDDQWEGVFCYNGIVSGLRLGGMGLLGDIDVNALLELKGLRTISLVNNSFSGSIPQFNRIGFLKAIYLSGNKFSGDIPQEYFKGMRSLKKLLLSDNQFTGHIPSSLAEIPQLMVLHLENNQFSGSIPDLNNPSLVQLNLSNNNLEGKVPASLLKFNESSFGGNPGLCGNMFGRTCELVDERSNAGLSNVAGNVSEPNRSRSSMLEIVVFVVASVVIVSLIVFLIVRSRRKKNEDVDMISAVEVQVAAAPVKRDVDTSVKKASSSRRGGSSHGKGVGEVVMVNSEKGVFGLPDLMRAAAEVLGNGGLGSSYKAVMANGVAVVVKRIRDMNILEKDGFDAEMRKLGKLKHWNILTPLAYHYRKEEKLVISEYVPGGSLMYLLHGDKGPSHAELDWPARLNIVQGIAEGMRYLLTNFASSDLPHGNLKSSNILLGPDYDPLLVDYGFSHMANPSSVAQTLFAYKAPEAAQGQISPSCDVYCLGVVILEILTGKYPSQYLSNGKGGTDVVQWVATAISEGREAELLDPEIASSRNSLGEMVQLLHIGAACTQSNPQERLDMVEGIRRIEEIKTNGGLESRTIEVLPSLRDGYADSHVCESQENGDQSRTRSRHGTNSFGSQGNFEFGIS* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1087 683 Gene3D Transferase(Phosphotransferase) domain 1 429 636 - -
Apr10g1087 683 MobiDBLite consensus disorder prediction 314 333 - -
Apr10g1087 683 MobiDBLite consensus disorder prediction 664 683 - -
Apr10g1087 683 ProSiteProfiles Protein kinase domain profile. 353 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1087 683 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 7 631 - -
Apr10g1087 683 Gene3D Ribonuclease Inhibitor 28 188 IPR032675 -
Apr10g1087 683 Pfam Leucine rich repeat 121 180 IPR001611 GO:0005515
Apr10g1087 683 Gene3D Phosphorylase Kinase; domain 1 332 428 - -
Apr10g1087 683 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Apr10g1087 683 MobiDBLite consensus disorder prediction 652 683 - -
Apr10g1087 683 SUPERFAMILY Protein kinase-like (PK-like) 357 618 IPR011009 -
Apr10g1087 683 Gene3D Ribonuclease Inhibitor 189 235 IPR032675 -
Apr10g1087 683 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 7 631 - -
Apr10g1087 683 SUPERFAMILY L domain-like 56 212 - -
Apr10g1087 683 Pfam Protein kinase domain 357 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1087 683 Pfam Leucine Rich Repeat 192 213 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1087 Apr-Chr10 23234226 23236588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1087 11 625 Receptor kinase-like Gene Family AT3G42880 46.729 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr10g1087 Pkinase 2.2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1087 - - gmx:100814059 865.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1087 10 23234226 23236588 Apr10g1087 10 23234226 23236588 ECH