Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1086 ATGGAGAGCCTCCCACTTGAGACGGCGGAGAAGATCATTCTCCGGTGGGACTCGACGGCGTCGGAGGAGGCGCGTGAGAAGATGATATTCGAGGGAGAGCGTGAAGAGGTGGATCTCTACCTTCAAGCGGTGGATGAAATCCAACGCTCTCTCTCTTCCCTCACTCTCTCTCCTTCCTCGGACAAAGTCAACTCGGCCATTCAGATCGCCATGGCTCGCTTAGAAGACGAGTTCCGCAACATCCTCATCTCTCACACGAACCCCTTCGACCCCACCATCGAAGACCCTCAACAAGACCCTTCTCTCCCTTCTTCTTCTTCTCCTTCTCCTTCTTTTGCTCAGCACGATGAGGACGATGACGTCGACGTTGAAAACAAGCTTCTCCGTTTCAACAGTGACGGCGCTTCCTCCACCGTTAACAGCAGTTACCGTTCCACAAGCAGTATCCGTGAGATCGATCTCATACCCTCTGATGCCGTCTACGACCTCCGTTGCATAGCTGAGAGAATGATCTCTTCTGGGTACTTGAGAGAGTGCATCCAGGTTTATGGTAGTGTGAGAAAAACTGCTGTTGATGGTAGTTTCAGAAGGTTGGGGATTGAGAAGCTTAGCATCGGTGATGTTCAGAGGTTGGAGTGGGAACAGCTTGAGGCTAAGATCAGGCGTTGGATAAGGGCTGCAAAGGTTTGTGTGAGGACCCTTTTTGCCAGTGAGAAGAAACTGTGTGAGCAAATCTTTGATGGGGTTGGAACCGCTATTGATGATGCTTGTTTCATGGAGACAGTTAAGGGTCCTGCTATTCAGCTTTTTAACTTTGCCGAGGCTATTAGTATAAGCAGAAGGTCACCTGAGAAGCTTTTCAAGATTCTTGATTTGCATGATGCTTTGATGGATTTGATGCCTGATATTGATGTTGTGTTTGATTCCAAGAGTTCTGAGACTATAAGGGTTCAAGCTGCTGAGATTTTGTCAAGGTTGGGTGAGGCTGCTAGAGGGATTTTGTCGGAGTTTGAGAATGCTGTGCTTAGGGAACCCTCTAAGGTTCCTGTTCCTGGTGGCACAATTCACCCTTTGACTAGGTATTCGGGTGATCCTTCTACACCTGATATGGATTTGGCTGAATTGGAAGGGAAGACCCCTTTGGCTGTTCACTTGATTTGGATCATTGTTATATTGCAATTCAACTTGGATGGAAAATCCAAGCATTACAAAGATGCCTCTTTGAGTCACTTGTTTATGATGAACAATGTGCACTACATTGTGCAGAAGGTGAGAGGGTCTCCTGAGTTGAGGGAGATGATTGGAGATGATTATTTGAGGAAGCTCACAGGGAAGTTCAGGCAGGCTGCTACAAGCTACCAGAGAGCAACTTGGGTGAGAGTGTTGTATTGTTTGAGGGATGAGGGGTTGCATGTGAGTGGAGGATTCTCTTCTGGGGTCTCAAAGAGTGCTCTCAGGGAAAGGTTTAAGGCCTTTAATGCTATGTTTGAGGAGGTTCATAGGACCCAAGCTGTTTGGTTGATACCGGATTCCCAGCTCAGGGAGGAGCTTAGGATATCTATTTCTGAGAAGCTGATCCCGGCTTACAGGTCGTTTCTTGGGAGGTTCAGGAGCCACATAGAGAGTGGAAGGCATCCAGAGAACTACATCAAGTATTCTGTTGAGGACTTGGAAGATGCTGTTTTGGACTTTTTTGAAGGAATTCCTGTTTCTCAGCACATGAGGAGGAGATCTCAATGA 1740 0.4747 MESLPLETAEKIILRWDSTASEEAREKMIFEGEREEVDLYLQAVDEIQRSLSSLTLSPSSDKVNSAIQIAMARLEDEFRNILISHTNPFDPTIEDPQQDPSLPSSSSPSPSFAQHDEDDDVDVENKLLRFNSDGASSTVNSSYRSTSSIREIDLIPSDAVYDLRCIAERMISSGYLRECIQVYGSVRKTAVDGSFRRLGIEKLSIGDVQRLEWEQLEAKIRRWIRAAKVCVRTLFASEKKLCEQIFDGVGTAIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALMDLMPDIDVVFDSKSSETIRVQAAEILSRLGEAARGILSEFENAVLREPSKVPVPGGTIHPLTRYSGDPSTPDMDLAELEGKTPLAVHLIWIIVILQFNLDGKSKHYKDASLSHLFMMNNVHYIVQKVRGSPELREMIGDDYLRKLTGKFRQAATSYQRATWVRVLYCLRDEGLHVSGGFSSGVSKSALRERFKAFNAMFEEVHRTQAVWLIPDSQLREELRISISEKLIPAYRSFLGRFRSHIESGRHPENYIKYSVEDLEDAVLDFFEGIPVSQHMRRRSQ* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1086 579 MobiDBLite consensus disorder prediction 86 118 - -
Apr10g1086 579 PANTHER EXOCYST COMPLEX PROTEIN EXO70 4 361 IPR004140 GO:0000145|GO:0006887
Apr10g1086 579 PANTHER EXOCYST COMPLEX PROTEIN EXO70 363 579 IPR004140 GO:0000145|GO:0006887
Apr10g1086 579 MobiDBLite consensus disorder prediction 86 112 - -
Apr10g1086 579 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 4 361 - -
Apr10g1086 579 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 363 579 - -
Apr10g1086 579 Gene3D Exocyst complex component Exo70 12 575 - -
Apr10g1086 579 SUPERFAMILY Cullin repeat-like 34 566 IPR016159 -
Apr10g1086 579 Pfam Exo70 exocyst complex subunit 222 361 IPR046364 GO:0000145|GO:0005546|GO:0006887
Apr10g1086 579 Pfam Exo70 exocyst complex subunit 374 561 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1086 Apr-Chr10 23223445 23227375 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1086 6 579 EXO70 exocyst subunit family AT1G72470 67.915 0.0 802
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1086 K07195 - gmx:100808671 948.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1086 10 23223445 23227375 Apr10g1086 10 23223445 23227375 ECH