Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1078 ATGAAGGCGCTAAATGGCTTGTTTGGTGCGAGACGCAGAAAGTTTCATGGGGTTTTCAATGGCTTATGTGTCATGATTGTGCTTTTCTTCTTTTACAATCGAGAAGACATCATTCGCAACCCGCTTCTTAGGCAATCTTCGTTTTTGGTAAATCGTGGTTTGCCTCAAAAATTGATTTTGGAAAATGGGGCTTTTGTGATTCACCGTAGAATGGTTGAAATCAGTGTTAACAGTTCAAGTGCGGCTGGTGACAAAGATTTAGGTGCGAGTAATCCTGGATTTTGTAGTGGGTTGCTCCATCATGATGGTTATGCTAGCCCATGTGAATTCTTAAAAGCCTATCCACAGTGCTCTTCTGATGGGTATCTTGATTACTTGAGATTTTTCTATTGTAAATGTGGTAGTTTTAGAGTGCTTGGTTATCTAGTATTGGGTTTGTGGCTTGCTGCTTTGTTTTATCTCTTGGGGAACACTGCTGCAGATTACTTTTGCCCTTCTCTTGAGCATCTTTCGAGGCTCTTGAAATTGCCTCCAACTGTGGCTGGGGTTGTGCTGCTTCCACTTGGGAATGGAGCACCTGATGTGTTTTCCAGTATTGCTGCCTTTGTGGGCACTGAAACAGGTGAAGTCGGTCTTAACAGCGTGTTAGGTGGTGCTCTCTTTGTTACCACTATTGTTGTTGGAGCTGTTTCGTTGTGCGTTGCGGAGAAGGAGATTCAAATTGATAGAAGGTGCTTTATAAGGGATGTGAGTTTCTTTCTCGTCACTCTTGTTTCGCTGCTTTTGATTTTGGTTGTTGGTAAGGTGGGTGTTGGGGCAGCCATTGCTTTTGTATCGATTTATGTTGTTTATGCATTCATTGTTGCTGCCAATGAGATGTTGAGGAAACAGGCGCGGAGGTTGAAATTGGATGCTGTCACGCCATTACTTACTGTCCAGGGAAGTGTGTTCTCTATAGGTTCTGAAGAGGATACTTCTGTTTATAGCTCTTTGCTTGACTTAGACACTGAGAGTGATCCTCCTCGTCTCCCTCCATCATTGCCTCAGTGGATGTGGTCTTCAAATGTGGCAATATATTCAAATCAGGCAAATAAAATCAATTTTTCAGATGATGAAAGGCCTCCTTGGGGATGGAGTGACGAGCCCATGGAAAACACCAGGACATCTTTCTCTGTTTCAAAACTTTTTCTGCTGATGGAGATGCCACTTGCAATTCCTAGACGGCTAACAATTCCGATGGTCCACGAGGAAGTATGGTCAAAGCCATTAGCTGTGACCAGTGCTTCATTGGCTCCCATTCTTTTAGCCTTTTTGTGGAGCACCCAAGATAATGTGAGTAATCAGAGTATTATACTTTCATATTGTGTTGGCGTTGCTCTTGGATGCACATTTGGAATTCTTGCATATAACTACACACTGTCTGATCATCCACCATCTCAGTTTTTACTTCCTTGGGTTCTTGGAGGATTCATCATGAGCATAGTGTGGTTCTATATAATAGCAAATGAGCTTGTAGCACTATTGGTAGCGTTTGGTGTAATTTTCGAAATTAATCCATCCATCCTTGGATTAACCGTCTTAGCATGGGGAAATTCAATGGGAGATTTGATGTCAAATGTTGCATTGGCATTGGATGGAGAAGATGGAGTTCAGATTGCTTTATCTGGATGCTATGCAGGTCCTATGTTCAACACACTTGTTGGTTTGGGAATCTCGTTGTTGCTTGGGGCATGGTCAAAGAAACCTTCTGTGTATGTGGTGCCTAAAGACAGTAGCTTGTTCTACACCATGGGATTTCTCATCACAGGACTGTTATGGGCACTTGTCCTTCTACCTCGCAATAACATGCATCCTAACAGAATACTAGGAATGGGACTCATCACCCTTTATTTCATATTTCTTTCTTTCAGGGTGTTGACTGCTATGGGGCTCATAACGATTGCTGGTTTAAGTTGA 1956 0.4259 MKALNGLFGARRRKFHGVFNGLCVMIVLFFFYNREDIIRNPLLRQSSFLVNRGLPQKLILENGAFVIHRRMVEISVNSSSAAGDKDLGASNPGFCSGLLHHDGYASPCEFLKAYPQCSSDGYLDYLRFFYCKCGSFRVLGYLVLGLWLAALFYLLGNTAADYFCPSLEHLSRLLKLPPTVAGVVLLPLGNGAPDVFSSIAAFVGTETGEVGLNSVLGGALFVTTIVVGAVSLCVAEKEIQIDRRCFIRDVSFFLVTLVSLLLILVVGKVGVGAAIAFVSIYVVYAFIVAANEMLRKQARRLKLDAVTPLLTVQGSVFSIGSEEDTSVYSSLLDLDTESDPPRLPPSLPQWMWSSNVAIYSNQANKINFSDDERPPWGWSDEPMENTRTSFSVSKLFLLMEMPLAIPRRLTIPMVHEEVWSKPLAVTSASLAPILLAFLWSTQDNVSNQSIILSYCVGVALGCTFGILAYNYTLSDHPPSQFLLPWVLGGFIMSIVWFYIIANELVALLVAFGVIFEINPSILGLTVLAWGNSMGDLMSNVALALDGEDGVQIALSGCYAGPMFNTLVGLGISLLLGAWSKKPSVYVVPKDSSLFYTMGFLITGLLWALVLLPRNNMHPNRILGMGLITLYFIFLSFRVLTAMGLITIAGLS* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1078 651 Pfam Sodium/calcium exchanger protein 486 637 IPR004837 GO:0016021|GO:0055085
Apr10g1078 651 Pfam Sodium/calcium exchanger protein 146 288 IPR004837 GO:0016021|GO:0055085
Apr10g1078 651 Gene3D - 418 639 IPR044880 -
Apr10g1078 651 Gene3D - 176 316 IPR044880 -
Apr10g1078 651 PANTHER CATION/CALCIUM EXCHANGER 4 10 646 - -
Apr10g1078 651 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 10 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1078 Apr-Chr10 23156470 23159198 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1078 73 645 Antiporters AT5G17860 41.391 4.65e-136 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1078 K13754 - gmx:100796101 1084.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1078 10 23156470 23159198 Apr10g1078 10 23156470 23159198 ECH