Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1073 ATGGCGATAGAGTTGGAAGGTTGGGTTTCAACCGCAGCCGCATGGTTTGCAACCTTCGCCGTGCTCCTCCTCCTCAGCCGCCGCGTCATCCGCCGCCGATACAAACTCCCACCTGGCCCAAAACCATGGCCCATCATAGGAAACCTCAACCTCATTGGATCCCTCCCACACCGGTCCATCCATTCTCTCTGCCAAAAATACGGGCCTATCATGCATGTCTGGTTCGGGTCCCACCCCGTTGTTGTGGGCTCCTCCGTGGAAATGGCCAGAGCCTTTCTCAAAACCCACGACGCCGTCCTCGCCGGCAGGCCCAAATTCTCGGCGGGTAAATACACAACCTACAACTATTCAGACATAACTTGGTCCCAGTACGGGCCATACTGGCGCCAGGCTCGTAGAATGTGCCTAATGGAATTGTTCAGTGCGAAGAGGCTCGAAGAATATGAGTACATTAGAAAGCAAGAGCTACGTGCTCTTCTCAACGAACTCTTCCATTCAACAAACAAAACCATTTTGTTGAAAGACCATCTTTCAACACTAAGTCTCAACGTTATAAGCCGCATGGTGTTGGGGAAAAAGTATTTAGAAGAAACTGAAAACGCGTTTATTTCCCCCGACGAGTTCAAGAAAATGCTTGATGAGTTGTTTTTGCTTAATGGGGTCCTCAACATTGGGGACTTCATTCCTTGGATTCACTTCTTGGACTTGCAAGGTTACGTGAAAAGAATGAAGGCTCTGAGCAAAAAATTTGATAGGTTTATGGAACACGTGTTGGATGAACACATTGAGAGAAAAGAAAGGGTGAAAGATTATGTGGCTAAGGATATGGTTGATGTGCTCTTGCAGCTTGCCGAGGATCCTTCTCTTGAGGTCAAGCTTGAGAGGCATGGAGTCAAAGCGTTCACTCAGGACCTAATAGCAGGTGGGACAGAGAGCTCAGCTGTAACTGTAGAATGGACAATCACTGAGCTATTGAGAAGGCCAGAGTTATTCAAGAAGGCAACAGAGGAGTTAGACAGGGTAATAGGGAGAGAAAGATGGGTTGAAGAGAAGGACATTGTGAACTTACCTTATATTAATGCAATTGCTAAGGAAGCAATGAGGCTACACCCTGTCGCACCATTGTTAGTGCCAAGGTTGGCTCGTGAGGATTGCCATATTGATGGCTATGATATCCCAAAAGGGACTCAAGTGCTTGTCAATATTTGGACTATTGGTAGAGATCCTTCAATTTGGGACGAACCAAATGAATTTCGACCAGAGAGGTTTATAGGTAAGGAGATAGATGTTAAAGGGCATGACTATGAGCTATTGCCATTTGGTGCTGGTAGAAGGATGTGTCCTGGGTACCCTCTTGGTCTTAAGGTCATTCAGGCAAGTTTGGCTAACCTATTGCATGGCTTTAATTGGAGACTCCCCAATGGCATAAAGAATAAGGACATAAATATGGATGAGATCTTTGGGTTGTCTACACCTAAGAAAATACCTCTAGAAGCAGTTGTTGAGCCTAGACTTCCACACCATCTTTATTCCCTTTGA 1539 0.4613 MAIELEGWVSTAAAWFATFAVLLLLSRRVIRRRYKLPPGPKPWPIIGNLNLIGSLPHRSIHSLCQKYGPIMHVWFGSHPVVVGSSVEMARAFLKTHDAVLAGRPKFSAGKYTTYNYSDITWSQYGPYWRQARRMCLMELFSAKRLEEYEYIRKQELRALLNELFHSTNKTILLKDHLSTLSLNVISRMVLGKKYLEETENAFISPDEFKKMLDELFLLNGVLNIGDFIPWIHFLDLQGYVKRMKALSKKFDRFMEHVLDEHIERKERVKDYVAKDMVDVLLQLAEDPSLEVKLERHGVKAFTQDLIAGGTESSAVTVEWTITELLRRPELFKKATEELDRVIGRERWVEEKDIVNLPYINAIAKEAMRLHPVAPLLVPRLAREDCHIDGYDIPKGTQVLVNIWTIGRDPSIWDEPNEFRPERFIGKEIDVKGHDYELLPFGAGRRMCPGYPLGLKVIQASLANLLHGFNWRLPNGIKNKDINMDEIFGLSTPKKIPLEAVVEPRLPHHLYSL* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1073 512 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1073 512 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1073 512 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1073 512 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1073 512 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1073 512 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1073 512 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1073 512 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1073 512 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1073 512 SUPERFAMILY Cytochrome P450 37 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1073 512 Pfam Cytochrome P450 37 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1073 512 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1073 512 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1073 512 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g1073 512 PANTHER CYTOCHROME P450 98A9 5 511 - -
Apr10g1073 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Apr10g1073 512 Gene3D Cytochrome P450 29 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1073 Apr-Chr10 23106824 23109676 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1073 19 512 Cytochrome P450 AT5G07990 42.715 7.67e-143 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1073 K20623 - gmx:100790480 918.302