Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1068 ATGACCATGGAACCAAACCCATCATCAGATCACATTCTGGACTGGTTCGAAGGCTCTGTCCCTTTCTTTCCACCATTCTTGGATGATCCATATAACACTAGTGACATCCAAGTGTATCAGTTATGGGATCAGGACCAAGACATTAGCAACCACTACCAAATTGATACCAATATTGGTTCCCCTAATGCCACCAACATTACTACTGCTGCTAGTACTACAACTAGCATAACACCCCTTGAGCCTTATGATTCTAATAACCACCAACCACTTTCTGACTTGCCCAAGAAAAGAAATGCCACCGATGAATCAAGCCTCAAACCATCACAAAACCATAGGCACAAGAAAATCAAGAGTCATCCAATGAATGAAGCAAACAATGGAGATGCAGCTGTTCAAGGGGCAAGTACAACAGTTAAAAAATCTGGTGGGAACAAGAAGGGTGCAGCTAAGGCCAATGGAAATAATAGTAACAATGGAAACAACAAGGAAGGTAGGTGGGCAGAACAATTGCTCAACCCTTGTGCTGTTGCCATAACTGGTGGAAACTTGAACCGTGTGCAACACCTCTTATATGTTCTCCATGAGCTAGCATCACCTACTGGTGATGCCAACCACAGGCTTGCTGAACATGGTCTTAGAGCACTGACACATCATCTATCTTCTTCTACTTCATCTAAATCTTCATCTTCAGGGGCTTTAACTTTTGCATCAACTGAACCAAGGTTCTTCCAAAAGTCACTACTCAAGTTCTATGAGGTTAGTCCTTGGTTTTCCTTTCCCAACAACATAGCAAATGCTTCCATTCTTCAAGTTCTTGGTGAAGAGGCAAATAGTTCACGTACCCTTCACATCCTTGACATTGGTGTCTCTCATGGTGTGCAATGGCCAACTTTTCTAGAGGCCTTGAGCCGTCGACCGGGTGGACCTCCTCCGCTGGTTCGCCTCACCGTGGTTACTGCTTCCTCCACTGAAAATGACCCAAATATGGAGACTCCATTTTCAGTTGGTCCACCTGGTGATAACTTCTCTTCTAGACTCCTTGGTTTTGCTCAGTCCATGAACGTTAATTTGCAGATAAAGAGGCTTGATAATCATCCATTACAGACATTGAATGCTCAAATTATTGACACCTACCCTGATGAAATCTTTGTTGTTTGTGCACAGTTTAGGCTGCACCACTTGAATCATAACAGTCCTGATGAAAGAATTGAGTTTCTAAAGATGTTAAAGAACATGGAGCCCAAAGGGGTGATATTAAGTGACAACAACATGGATTGTTGCTGCAGTAGCTGTGGAAATTTTGCCACTGGGTTCTCTAAAAGAGTGGAGTACTTGTGGAGGTTTTTGGATTCAACCAGCTCTGCATTCAAGGGTCGTGAGAATGATGAAAGGAGGGTGATGGAAGGTGAGGCTGCAAAAGCATTGACATACCAGCGTGAGATGAATGAAGGGAAAGAAAAATGGTGTGAGAGAATGAAAGAAGCAGGGTTTGTAGGGGAAGTATTTGGAGAGGATGTGACGGATGGAGCTAGAGCATTGCTGAGGAAGTATGATAGTAGTTGGGAGATGAAAGTAGAAGATAACAATACTAGTGTGGGACTATGGTGGAAGGGGCAACCTGTTTCTTTCTGTTCTTTGTGGAAGCTGGATGAGAATGAGCATGGTAGGCCATTGACGGCTAGGCTGTAG 1689 0.4364 MTMEPNPSSDHILDWFEGSVPFFPPFLDDPYNTSDIQVYQLWDQDQDISNHYQIDTNIGSPNATNITTAASTTTSITPLEPYDSNNHQPLSDLPKKRNATDESSLKPSQNHRHKKIKSHPMNEANNGDAAVQGASTTVKKSGGNKKGAAKANGNNSNNGNNKEGRWAEQLLNPCAVAITGGNLNRVQHLLYVLHELASPTGDANHRLAEHGLRALTHHLSSSTSSKSSSSGALTFASTEPRFFQKSLLKFYEVSPWFSFPNNIANASILQVLGEEANSSRTLHILDIGVSHGVQWPTFLEALSRRPGGPPPLVRLTVVTASSTENDPNMETPFSVGPPGDNFSSRLLGFAQSMNVNLQIKRLDNHPLQTLNAQIIDTYPDEIFVVCAQFRLHHLNHNSPDERIEFLKMLKNMEPKGVILSDNNMDCCCSSCGNFATGFSKRVEYLWRFLDSTSSAFKGRENDERRVMEGEAAKALTYQREMNEGKEKWCERMKEAGFVGEVFGEDVTDGARALLRKYDSSWEMKVEDNNTSVGLWWKGQPVSFCSLWKLDENEHGRPLTARL* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1068 562 MobiDBLite consensus disorder prediction 75 93 - -
Apr10g1068 562 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 548 IPR005202 -
Apr10g1068 562 MobiDBLite consensus disorder prediction 94 109 - -
Apr10g1068 562 MobiDBLite consensus disorder prediction 75 164 - -
Apr10g1068 562 ProSiteProfiles GRAS family profile. 158 548 IPR005202 -
Apr10g1068 562 PANTHER NODULATION-SIGNALING PATHWAY 1 PROTEIN-LIKE 4 548 IPR030015 -
Apr10g1068 562 Pfam GRAS domain family 168 548 IPR005202 -
Apr10g1068 562 MobiDBLite consensus disorder prediction 128 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1068 Apr-Chr10 23059853 23061541 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1068 2 548 GRAS Transcription Factor Family AT3G13840 50.545 1.74e-173 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr10g1068 GRAS 2.6e-75 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1068 - - gmx:100810818 804.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1068 10 23059853 23061541 Apr10g1068 10 23059853 23061541 ECH