Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1053 ATGGAAACAGTTGTTGGTATTGAGGATAATGATGATGGGAAGCTTGAAGACAGTGGAGTTGATAGAAGCAGTTCTGCTGTGTCTTCACCGAAGCAAATTGCCAATCCAGTTGTATACAAGCTTGTTCGGGTTGAAGGTGATGGGAGGTTAGTGCCTGCAACAGATGATGAAGTAATGGAGGTGGAGGATTTTCTTGAGTATGAAAACAGTGAAATGCGTGTTGTTGCGGACACTGGGCAGAGTTTGGAATGCATATCAATTGAAAGATCATCTTCTGGGAAGCTTCGTTTGGAGTGCTCAGAAGGCACTGCAGAGGCAGATTTGGGGAAACTCAATGCAAAGTTTCAGTACATTGAGCAGATGTTGCAAAAGGTCAAAGAAGAAGAGAAACTTCGCTTATCATGTGGATCGCCTGTTCATTCTCATGTAAATATAGACAGCCAGTGTTCAGCTGATAAATTTCCTATCATGGATGGGAAGGCTCAATCTGAAACTCCGTACCAAGAAATACCTTCTATAGCTTCAAGTTTAAATTATAGTCATAGTAATCAATCTGGGAGTATTGATCAGTGTTCCAGACCTTCAGAAGGGGTAATAGAAAGTGGATCTTCTGCTTCTGCTGTCTATTATAATTTGAAGCCTGATTTTTCAATGGTAGATGGAGAAATATGCTTGGATAAGCTATCAATCAGAGAGCTTCATGAACTGTTTAAGGTAACTTTTGGTCGGCAAACAACTGTTAAAGACAAACAGTGGCTGAAAAGGAGGATTGCCATGAGTTTAACTAACTCATGCGATGTTTCAGCGACAACTTTCATTGTTAAAGATAATAAAATTGTTAGAAAATGTGAAGAAGACAGTTCCAAAAATATGAATGCTGCATCTTTAATCTCTTCAGAAAATATGGCTGAGGAAGAGGATGTCAACTTTAATGATTCATCTGCTGTAAAGGGTTGTGGAATTGAGGATAACCTAGTTGTTTCTGAAACAAGACTGAGAAATCACAACACGGAACATGGATTGGGACATGAGAATCATCAGATAGAAGAAAGAGCTGCAAAAAGAATACGGAAGCCCACTAAGAGATATATTGAAGAGCTCTCTGAACATGAATTTAGAGAGCACAGCCCGAGGTCATTAATTTCTAATAAAAATATGGGACTTGGACATGTTTCTCCAACTTCATATGTCAGGCCTTCTAGAAATGCTTTTTCAGATGGCAGAACATTTATCACCAGGTTAGATTCACTTGGAGGTTCTGATGTCCTAATTCCTTGTGCTTCTCGGGATCAAAGAAGTCGTCCAAGGAAAAATATCACCTCTCTTATGAAATTCCATCCAACTGGCATGGGTGAGGCTGCAAAATTGGGTAATAAGTTGCTGGGAGAGCATGGTTTTGATGCTGGTAGTGAGATTCAGGACAAAGTCTTGAAGTCAAGAATGCCTGCAAAGTTTCATCAGCCAGTAAGACCAACTTATCCTTTGCTAATGGTAGAAAGGTCTGCTTGTGAACCTGCAAAAGAGACAATTGAGCTTTGGCAGGAATTGAGGCCAGAAAAGGCTGATCCATCTAGCCACACTTCTGATGACAATATCGTTACTGTTCCCACTGCTAAAGGTGGAATGAGGAGGAAGCATCATCGTGCATGGACTCTTGTTGAGGTAATGAAATTGGTTGAAGGTGTGTCTCAGTGCGGACCAGGGAGGTGGTCTGAGATTAAACGCCTCTCCTTTTCATCACACTCATATCGTACTTCCGTTGATCTTAAGGACAAGTGGAGGAATTTGCTCAAAGCTAGCTTTGCAGATGACGGGATAAATGCGCGGAAGCATGGTACAGTTATGATTCCTGAGACAATTTTAGTACGTGTAAGAGAGCTTGCAGAAATGAATTCTCAGGTGCCTCCAAGCAAATTAACAGGTGGTGCAGGGAATGTGCATGGTGGAGATAGATCGGGGTACTTGTAA 1968 0.4121 METVVGIEDNDDGKLEDSGVDRSSSAVSSPKQIANPVVYKLVRVEGDGRLVPATDDEVMEVEDFLEYENSEMRVVADTGQSLECISIERSSSGKLRLECSEGTAEADLGKLNAKFQYIEQMLQKVKEEEKLRLSCGSPVHSHVNIDSQCSADKFPIMDGKAQSETPYQEIPSIASSLNYSHSNQSGSIDQCSRPSEGVIESGSSASAVYYNLKPDFSMVDGEICLDKLSIRELHELFKVTFGRQTTVKDKQWLKRRIAMSLTNSCDVSATTFIVKDNKIVRKCEEDSSKNMNAASLISSENMAEEEDVNFNDSSAVKGCGIEDNLVVSETRLRNHNTEHGLGHENHQIEERAAKRIRKPTKRYIEELSEHEFREHSPRSLISNKNMGLGHVSPTSYVRPSRNAFSDGRTFITRLDSLGGSDVLIPCASRDQRSRPRKNITSLMKFHPTGMGEAAKLGNKLLGEHGFDAGSEIQDKVLKSRMPAKFHQPVRPTYPLLMVERSACEPAKETIELWQELRPEKADPSSHTSDDNIVTVPTAKGGMRRKHHRAWTLVEVMKLVEGVSQCGPGRWSEIKRLSFSSHSYRTSVDLKDKWRNLLKASFADDGINARKHGTVMIPETILVRVRELAEMNSQVPPSKLTGGAGNVHGGDRSGYL* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1053 655 ProSiteProfiles Myb-like domain profile. 550 597 IPR001005 -
Apr10g1053 655 PANTHER TRF-LIKE 3 1 654 - -
Apr10g1053 655 SMART sant 546 599 IPR001005 -
Apr10g1053 655 MobiDBLite consensus disorder prediction 632 655 - -
Apr10g1053 655 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 1 654 - -
Apr10g1053 655 CDD SANT_TRF 548 598 - -
Apr10g1053 655 Pfam Myb-like DNA-binding domain 549 597 IPR001005 -
Apr10g1053 655 Gene3D - 537 640 - -
Apr10g1053 655 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 542 601 IPR017930 -
Apr10g1053 655 SUPERFAMILY Homeodomain-like 544 599 IPR009057 -
Apr10g1053 655 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1053 Apr-Chr10 22922652 22930677 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1053 550 596 Single Myb Histone (SMH) Gene Family AT1G72740 44.898 5.02e-06 47.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Apr10g1053 Myb_DNA-binding 4.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1053 - - gmx:100782501 999.579
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1053 10 22922652 22930677 Apr10g1053 10 22922652 22930677 ECH