Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1049 ATGTTGACTTGCATAGCGTGTACAAAGCAGCTCAATAATGGATCTCTTCGCCAAGAAGAAGAGGAAGAAGCAGTGCACACACCCAGCACCAAGCAAGCCATCAAGGCTCTCACTGCTCAGATCAAGGACATGGCAGTGAAGGCTTCTGGGGCCTATAAGAGTTGCAAGCCTTGTTCAGGGTCTTCAAATGGTAACAGGAATAGAAAGTATGCAGATTCTGATATGGCATCAGATTCAGCAAGGTTCAACTGGGCCTACCGCAGAACTGGGAGCTCCAATTCAACCCCAAGGATGTGGGGGAAGGAAATGGAAGGTAAAGTGAAAGGGCTTTCCAGTGGTGAAGGAACACCAGCATCAGTGAGTGGAAGAACTGAGTCAGTGGTGTTCATGGAGGAGGATGAGCCTAAGGAATGGATTGCACAAGTGGAGCCTGGTGTGCTTATTACTTTTGTTTCATTGCCTCAGGGTGGGAATGATCTGAAGAGAATACGGTTCAGTCGTGAAATGTTTAATAAATGGCAAGCACAGAGGTGGTGGGCAGAGAATTATGACAAAGTCATGGAATTGTACAATGTTCAAAGGTTCAATCAGCAAGCAGTTCCTCTTCCAACACCCCCTAGATCTGAAGATGAGAGCTCAAAGATTGAATCTTCTAGGGACAGTCCTGTCACTCCTCCACTCAGCAAAGAGCGTGCACCCCGTCATTTTCACCACCCAATGGGGATGGGCTATTCGTCCTCAGATTCACTGGATCACCACCAAATGCAACCTCATCCTTGCTATGAAACAAGTGGTCTAGCGTCAACACCAAAGCTTTCCAACATTGGCGCACCAAAGACTGAAAGATCATCCATTGATGGTTCGGTAAGGACAAGTTCATCAGGAGAGGAAGATCACTCGGGTGAGCTTTCAATCAGCAATGCCAGTGATATGGAAACTGAATGGGTTGAACAGGATGAACCAGGAGTATACATCACTATCAGAGCACTGCCTGGTGGAACCAGGGAACTCAGGCGAGTCCGGTTCAGCCGAGAAAAGTTTGGAGAAATGCATGCCAGATTGTGGTGGGAAGAAAACCGTGCTAGGATACAAGAACAATACTTGTGA 1107 0.4724 MLTCIACTKQLNNGSLRQEEEEEAVHTPSTKQAIKALTAQIKDMAVKASGAYKSCKPCSGSSNGNRNRKYADSDMASDSARFNWAYRRTGSSNSTPRMWGKEMEGKVKGLSSGEGTPASVSGRTESVVFMEEDEPKEWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNQQAVPLPTPPRSEDESSKIESSRDSPVTPPLSKERAPRHFHHPMGMGYSSSDSLDHHQMQPHPCYETSGLASTPKLSNIGAPKTERSSIDGSVRTSSSGEEDHSGELSISNASDMETEWVEQDEPGVYITIRALPGGTRELRRVRFSREKFGEMHARLWWEENRARIQEQYL* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1049 368 ProSiteProfiles BRX domain profile. 136 191 IPR013591 -
Apr10g1049 368 ProSiteProfiles BRX domain profile. 313 368 IPR013591 -
Apr10g1049 368 Pfam Transcription factor BRX N-terminal domain 22 58 IPR027988 -
Apr10g1049 368 PANTHER PROTEIN BREVIS RADIX-LIKE 3 1 368 - -
Apr10g1049 368 MobiDBLite consensus disorder prediction 261 291 - -
Apr10g1049 368 MobiDBLite consensus disorder prediction 199 304 - -
Apr10g1049 368 Pfam Transcription factor regulating root and shoot growth via Pin3 136 190 IPR013591 -
Apr10g1049 368 Pfam Transcription factor regulating root and shoot growth via Pin3 312 367 IPR013591 -
Apr10g1049 368 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 368 IPR044532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1049 Apr-Chr10 22871519 22875693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1049 1 368 Major Intrinsic Protein MIP AT1G31880 48.187 7.91e-106 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1049 - - gmx:100805480 721.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1049 10 22871519 22875693 Apr10g1049 10 22871519 22875693 ECH