Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1038 ATGTTCCTCATGCATACGCCGTCGCCTGCCGTCGTGGCAGACGGAGGCACCACCGTCATCGCCATCAATGCTGACCGGAATAGCCACTTTGCCGTCAAATGGGCGGTGGAGCATCTTCTAAAGAAAAACTCCTCATGCACCCTTGTTCATGTTAGGACCAAGTCTATGCATCCCCATGATGTCGTTGATGTACCTAAACACGGTCGTCCACCAACTGAAGAAGAATTGCACCAATTGTTTCTTCCCTTCCGTGGGTTTTGTGCTAGAAAAGGGATCGCAGCAAAGGAGTTGGTCCTGCATGACATTGATGTTCCAAGTGCGCTGACAGATTATGTCGTTGAACATTCTATCAGCAATGTGGTGGTTGGGGTTGATGCTTCCCCTTGGGGTGCTCTTGTAAGGAGATTTAATAAAGATGCAGATGTGGCAACTAGTTTAGCAAAGTCCTTGCCAGAGACTTGCACTTTATATGTTGTATTAAAAGGAAAAGTACAAATTATCCAACCAACTGGTCAGCCTCATCAGCATATTAATGTCACACCAACGAAAACCATAAACAACATAGTTACTCTCTGGCAAAATGCGCCATTGGTTCATTCACACAAGGTTCATGCCAACCCCCACCCTGATTATGAAGATATAAACAGAACACCAGTTGGGAGAGACCCTAGCAATATTTGGGAATCTTTACGTGAAATAAAAGAGGCCACGTTAAAAACACCACGTAAGTGTCATGAAGATACCAATTCACCAAGATGTCCAGCGGAATACTCCCCATCATCACAAAATTCATCAAATCGAAATTCTCCTGCCAACAGTGATAGCTCAGGGCAATTGCTTGGTCCTCATTTGAATGATAAGTTACATGGAAACCATGAAGTAGTAGTAAAATCAGACAATCCTAAGGCCATCTCTCCTTTAAAACCATTAGGAAACTTGGAGATGGAAATGAGGAAACTAAAGCAAGAACTGAAAAAAACAACAGAGAAGTATAGTATGGCTTGCAGAGAAGCTGTTTTAGCAAAACAAAAGGCAATGGAGCTTGAAAAGATTAAGCAAGAAAAAGAACGCAATGTAGAAGAAGCTAGGCATGCTGAAGAGGCTGCATTGGCTTTGGTAGAGATAGAGAGGCAAAAGGCCAAAGCAGCTATGGAGTCAGCAGAAATGTTACAACGCTTGGCGGAAATGGAAACCCAAAAGAGAAAGGAAGCCGAACTAAGGGCCAAGCATGAGGAAGAAAAGAGGAACAAAGCATTACATGAAGTTGTATGTAATAGCGTTCCGTATAGAAGATACAATATTGAAGAAATTGAAGCTGCAACAGATAACTTTGACAATGCTTTGAAAATTGGTGAAGGGGGATATGGACCAGTGTTTAAAGGCTTGCTTGATCACACTGTTGTTGCCATCAAGGCTGTGAGACCAGACATGGCTCATGGAGAGAGGCAATTTCAACAAGAGGTTATTGTTTTGAGCACCATAAGACATCCAAACATGGTGCTTCTCCTAGGTGCATGCCCAGCGTTCGGATGCCTTGTGTATGAGTACATGGAAAATGGGAGCTTAGAAGATCGTCTATTCCGGAAAAATAACACCCCGCCAATTCCATGGCAAACACGTTTCAAAATAGCGTCTGAGATTGCGACTTGCCTTCTTTTCCTTCACCAAACAAAGCCTGAGCCACTTGTGCACCGTGACCTTAAGCCAGCAAACATTCTCTTAGACAAGAACTATGTCAGCAAGATCAGTGATGTGGGTTTGGCAAGGCTTGTTCCCCCATCTGTGGCCAACAAAACCACTCAATATCGCTTAACAGGTGCAGCTGGAACGTTTTGCTACATTGATCCTGAGTATCAACAAACGGGGTTGTTGGGTGTGAAATCAGACATATACTCATTAGGTATGGTGTTGCTACAGATTATTACTGCAAAGCCTCCAATGGGTTTGTCACACTTGGTTGAAGAGGCTATTGAAGCAGACACTTTAACACAAGTGCTTGATCCAAGTGTAGATTGGCCTGTTGAAGAGACCTTGTCATATGCCAAGTTGGCTTTGAAGTGTTGTGAGTTGAGAAAACGTGATCGACCAGACCTTGGTTCTGTTATTTTGCCTGAGCTGAATCGAATATCAAGGATATGGTACTATGAGGAGCCGCTCATAGATCATGGTTCTTTGCATTTTTGA 2184 0.4341 MFLMHTPSPAVVADGGTTVIAINADRNSHFAVKWAVEHLLKKNSSCTLVHVRTKSMHPHDVVDVPKHGRPPTEEELHQLFLPFRGFCARKGIAAKELVLHDIDVPSALTDYVVEHSISNVVVGVDASPWGALVRRFNKDADVATSLAKSLPETCTLYVVLKGKVQIIQPTGQPHQHINVTPTKTINNIVTLWQNAPLVHSHKVHANPHPDYEDINRTPVGRDPSNIWESLREIKEATLKTPRKCHEDTNSPRCPAEYSPSSQNSSNRNSPANSDSSGQLLGPHLNDKLHGNHEVVVKSDNPKAISPLKPLGNLEMEMRKLKQELKKTTEKYSMACREAVLAKQKAMELEKIKQEKERNVEEARHAEEAALALVEIERQKAKAAMESAEMLQRLAEMETQKRKEAELRAKHEEEKRNKALHEVVCNSVPYRRYNIEEIEAATDNFDNALKIGEGGYGPVFKGLLDHTVVAIKAVRPDMAHGERQFQQEVIVLSTIRHPNMVLLLGACPAFGCLVYEYMENGSLEDRLFRKNNTPPIPWQTRFKIASEIATCLLFLHQTKPEPLVHRDLKPANILLDKNYVSKISDVGLARLVPPSVANKTTQYRLTGAAGTFCYIDPEYQQTGLLGVKSDIYSLGMVLLQIITAKPPMGLSHLVEEAIEADTLTQVLDPSVDWPVEETLSYAKLALKCCELRKRDRPDLGSVILPELNRISRIWYYEEPLIDHGSLHF* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1038 727 Pfam Protein kinase domain 448 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1038 727 Gene3D HUPs 17 135 IPR014729 -
Apr10g1038 727 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 17 712 - -
Apr10g1038 727 Gene3D Phosphorylase Kinase; domain 1 423 516 - -
Apr10g1038 727 MobiDBLite consensus disorder prediction 203 217 - -
Apr10g1038 727 MobiDBLite consensus disorder prediction 253 280 - -
Apr10g1038 727 SUPERFAMILY Protein kinase-like (PK-like) 421 701 IPR011009 -
Apr10g1038 727 CDD STK_N 17 162 - -
Apr10g1038 727 PANTHER OS02G0152300 PROTEIN 17 712 - -
Apr10g1038 727 Coils Coil 310 421 - -
Apr10g1038 727 Gene3D Transferase(Phosphotransferase) domain 1 517 713 - -
Apr10g1038 727 ProSitePatterns Serine/Threonine protein kinases active-site signature. 562 574 IPR008271 GO:0004672|GO:0006468
Apr10g1038 727 SMART serkin_6 444 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1038 727 MobiDBLite consensus disorder prediction 238 286 - -
Apr10g1038 727 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 19 124 - -
Apr10g1038 727 ProSiteProfiles Protein kinase domain profile. 444 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g1038 727 MobiDBLite consensus disorder prediction 203 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1038 Apr-Chr10 22755030 22760026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1038 16 712 Receptor kinase-like Gene Family AT1G78940 47.420 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Apr10g1038 Pkinase 1.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1038 - - gmx:100799611 1025.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1038 10 22755030 22760026 Apr10g1038 10 22755030 22760026 ECH