Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1034 ATGTCCGATCACAAATCAGGATCCGACCCGAACAGCCAAACCCGACTCTACAATCCCTACAAGGACCTCGAAGTTCCTATTCGAAACCTCTACCACCTCCCTACCTCGCCGGAGTTCCTCTTCGTCGAAGAGGCTCGCCGCAAGCGCCGCTCGTGGGGCGAGAACCTCACCTTCTATACTGGCTGTGGCTACCTCGCCGGAGCAGTTGGCGGTGCCAGCGTTGGTCTCGTTGATGGCGTCAGATCCTTCGAGTCCGGCGACACCACGAAGCTCCGAATCAACCGCGTGCTCAACTCGTCTGGTCATTCGGGTCGGGCGTGGGGAAACAAGATCGGAATCATCGGGTTGATCTATGCGGGAATCGAAAGCGGGATCGAGGCGGCGAGAGACACCGATGATGTGTGGAACAGCGTGGCGGCAGGGCTTGGTACCGGCGCACTGTATCGAGCGGCGAGAGGGGTAAGATCAGCGGCGGTGGCCGGAGCGGTGGGTGGGGTTCTGGTCGGAGTGGCAGTAACGGCGAAGCAGGCGCTGAAACGATACGTTCCTATATGA 555 0.5982 MSDHKSGSDPNSQTRLYNPYKDLEVPIRNLYHLPTSPEFLFVEEARRKRRSWGENLTFYTGCGYLAGAVGGASVGLVDGVRSFESGDTTKLRINRVLNSSGHSGRAWGNKIGIIGLIYAGIESGIEAARDTDDVWNSVAAGLGTGALYRAARGVRSAAVAGAVGGVLVGVAVTAKQALKRYVPI* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1034 184 PANTHER TIM23 5 184 IPR045238 GO:0022857
Apr10g1034 184 Pfam Tim17/Tim22/Tim23/Pmp24 family 58 167 - -
Apr10g1034 184 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23 5 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1034 Apr-Chr10 22741893 22742842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1034 2 184 Chloroplast and Mitochondria Gene Families AT1G72750 73.118 6.54e-84 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1034 K17794 - gmx:100777112 289.271