Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1021 ATGACACGGGGGAGGATAAGGGCTAGGCTCCGTAGGAGCCATCTTTACACATTTGGTTGCCTTCGGCCTTCTACCACTGAGGAAGCACCACATCCACTTCAAGGTCCGGGATTCTCACGAACTGTGCATTGCAACCAGCCTCTGTTACATGAAAAGAGACCTCTATATTACTGCAAGAATGATATATCCACAACCAAATACAATGTTATTACCTTTTTCCCCAAGGCACTATTTGAACAATTTCGTAGGGTTGCTAATATATACTTCCTTTTGGCTGCGTGTCTCTCAGCCTCTCCAATTTCACCTTTCAGCCCAGCGAGCATGATTGCTCCTTTGGCATTTGTTGTTGGCCTTAGTATGGCAAAGGAAGCATTGGAAGATTCACGCAGGTTCCTTCAGGATGTCAAGGTTAATCACCGGAAGGTTAATCGCCATAAAGGCGATGGTGCTTTTGGTCCCAGGTCGTGGCAGAACATTATGGTTGGAGATGTGGTAAAAGTAGAAAAAGATAATTTTTTTCCAGCTGATTTGCTTCTCTTGTCAACAAGTTATGAGGATGGCATATGCTATGTGGAAACGATGAATTTAGATGGTGAGACCAACTTGAAGGTGAAAAGATCTTTGGAGGTTACGTTGACTCTAGATAATGATGAAGTGTTTAAAGATTTCTCTGGAACAATACGTTGTGAAGACCCAAACCCCAATCTTTATACTTTTGTTGGAAACTTGGAGTATGAACGCCAGGTTTATCCTCTTGATCCAAGTCAAATTCTTCTTCGAGATTCTAAGCTCAGGAACACTGAGTACATTTATGGGGTGGTCATTTTCACTGGTCATGACAGCAAAGTCATGCAGAATTCCACAAAATCCCCTTCAAAAAGGAGCAGAATAGAAAAGAAGATGGATTATATCATATACACCCTCTTCACTGTCCTTATTTTGATATCTGTTATTAGTTCCATTGGATTTATCGTCAAGGCTAAGTACCAAACCACAAAATGGTGGTACTTACGGCCTGACAATATTGAATCCCAGTACGATCCCCAGAAAATTGGACTGGCTGGAATGAGTCATCTGATTACTGCGCTCATTCTTTATGGATATTTGATACCCATCTCACTTTATGTTTCCATTGAGGTTGTAAAGGTTTTACAGGCAACCTTTATTAATCAAGACATCCAAATGTATGATGACGAAACTGGGACTCCCGCTGAAGCACGGACATCAAATTTGAATGAAGAGTTGGGTCAGGTTGACACTATCCTCTCAGATAAAACTGGCACTTTGACCTGTAATCAGATGGACTTTTTGAAGTGCTCCATTGCTGGTTCTGCCTATGGTGTGCGTTCCAGTGAAGTTGAACTTGCTGCAGCAAAGCAGATAGCTTCTGATCTTGAGGACCAGGATTCAGATCTCTCCAATTTTCCCATGCCCAAGGCCAACACACAAGTTTCATGGGAAAATGTTAAAAGAGCTGAAGAAATTGAACTGGAGACTGTTGTTACTTCTAACGGCGATGAGGATCAAAGGCGTGCCATAAAGGGATTTGGTTTTGAAGATGACCGTCTCATGAATTGTAATTGGTTGAAAGAGCCCAATGCTGATGACCTTTTGTTGTTTTTCCGAATATTAGCAGTTTGCCATACGGCCATTCCTGAGCTGAATGAGGAGACTGGAGTTTATACATATGAAGCTGAGTCACCTGATGAAGGGGCTTTTCTTGTAGCAGCTAGAGAATTTGGCTTTGAGTTTTGTAGAAGGACACAGTCAAGTATTTTCATACGTGAAAGATTTTCTGCTTCTCGGGAAGTGGTTGAAAGAGAGTACAAACTTTTGAATCTGCTTGATTTTACGAGTAAAAGAAAGCGGATGACAGTGATTGTGCGTGATGAGGAGGGCACACTTTTTCTTTTTTGCAAAGGGGCTGACAGTATCATATTTGATCGCATGTCAAAGAATGGAAAAAAGTATTTGGAGGCTACTACCAAACATTTGAATGAATATGGAGAAGCTGGTTTGCGAACACTAGCCCTAGCTTATAGAAAACTTGATGAGCAAGAGTACTCCGCTTGGAACAATGAATTTCTGAAAGCCAAAGCAGCTGTTGGGGCTGACAGAGAGGCAATGCTTGAGAGGGTATCAGATATGATGGAAAAAGAGTTGATTCTTGTTGGGGCTACTGCTGTGGAAGACAAACTGCAGAAAGGGGTGCCCCAATGTATTGATAAACTTGCTCAAGCTGGTCTCAAGATCTGGGTGTTGACAGGGGATAAGATGGAAACCGCAATCAACATTGGATTTGCTTGCAGTTTACTTCGACAGGGCATGAAGCAGATCTGTATAACTACTCCGGTTTCAGACTCAGTAACCAATGATGTCAAACAGTTCTTTAATTTAACACCCCAGGCCATCAAGGACAACATTTTGAATCAAATCACCAATGCTTCACAAATGATAAAGCTGGAGAAGGATCCTCATGCTGCATTTGCTTTAATTATTGATGGAAAAACTCTGACTTATGCTTTGGAAGATGATATGAAGCACCAATTTTTGGCATTGGCTGTTGATTGTGCATCTGTCATATGCTGTCGTGTGTCTCCCAAGCAAAAGGCATTGGTAACAAGGTTAGTGAAACAAGGTACTGGGAAGACCACTCTAGCAATAGGTGATGGTGCAAATGATGTTGGCATGATTCAAGAAGCAGATATTGGTATTGGAATCAGTGGGGTTGAAGGTATGCAGGCGGTGATGGCTAGTGACTTTGCTATTGCCCAATTTCGATTTTTAGAGAGACTTCTGGTAGTCCATGGACATTGGTGTTACAAGAGAATTGCACTAATGATCTGTTATTTCTTCTACAAGAATATTGCATTTGGCCTCACCATCTTCTATTTTGAGGCCTTCACAGGCTTCTCTGGTCAATCGGTTTATGATGACTGGTATATGATATTGTTCAATGTTGTTCTGACATCATTACCTGTCATTTCACTTGGTGTTTTTGAACAAGATGTTCCATCAGAAGTTTGTTTACAGTTTCCTGCACTGTATCAACAAGGACCCAAGAATTTGTTCTTTGACTGGTATAGAATACTGGGATGGATGGGGAATGGTCTCTATGCCTCCCTCGTCATCTTCTTCCTTGTTGTCACCATTTTCTATGATCAAGCATTCCGTGTTGATGGCCAGACGGCTGACATGGCTGCTGTCGGGACCACTATGTTCACTTGCATTATCTGGGCCGTCAACTGCCAGATTGCGCTGACAATGAGCCACTTTACATGGATTCAGCATGTGTTTGTATGGGGCAGCATAGTCACTTGGTACATCTTTCTCTTCTTGTATGGAATGATTTCTCCGGAATATTCCAACAGTGCCTACCAAATTCTAGTTGAAGCTCTTGCTCCTGCACCTATTTATTGGACAGTAACCCTTTTAGTTGCAGTTACTTGCAATCTTCCTTATTTTGCCCACATATCCTTCCAAAGATGTTTCCATCCCATGGATCATCACATTATCCAAGAAATCAAGTACTACAAGAAGGATATTGAAGATCAACACATGTGGACAAGAGAGCGTTCTAAAGCCAGACAGGAAACCAAGATTGGTATCACAGCAAGAGTGGAAGCAAAGATCAGGCAATTGAAGGGAAGGCTGCAAAAAAAGCAATCTATGTTGCCTATGTTGTCCCCATCTTGA 3696 0.4186 MTRGRIRARLRRSHLYTFGCLRPSTTEEAPHPLQGPGFSRTVHCNQPLLHEKRPLYYCKNDISTTKYNVITFFPKALFEQFRRVANIYFLLAACLSASPISPFSPASMIAPLAFVVGLSMAKEALEDSRRFLQDVKVNHRKVNRHKGDGAFGPRSWQNIMVGDVVKVEKDNFFPADLLLLSTSYEDGICYVETMNLDGETNLKVKRSLEVTLTLDNDEVFKDFSGTIRCEDPNPNLYTFVGNLEYERQVYPLDPSQILLRDSKLRNTEYIYGVVIFTGHDSKVMQNSTKSPSKRSRIEKKMDYIIYTLFTVLILISVISSIGFIVKAKYQTTKWWYLRPDNIESQYDPQKIGLAGMSHLITALILYGYLIPISLYVSIEVVKVLQATFINQDIQMYDDETGTPAEARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGSAYGVRSSEVELAAAKQIASDLEDQDSDLSNFPMPKANTQVSWENVKRAEEIELETVVTSNGDEDQRRAIKGFGFEDDRLMNCNWLKEPNADDLLLFFRILAVCHTAIPELNEETGVYTYEAESPDEGAFLVAAREFGFEFCRRTQSSIFIRERFSASREVVEREYKLLNLLDFTSKRKRMTVIVRDEEGTLFLFCKGADSIIFDRMSKNGKKYLEATTKHLNEYGEAGLRTLALAYRKLDEQEYSAWNNEFLKAKAAVGADREAMLERVSDMMEKELILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITTPVSDSVTNDVKQFFNLTPQAIKDNILNQITNASQMIKLEKDPHAAFALIIDGKTLTYALEDDMKHQFLALAVDCASVICCRVSPKQKALVTRLVKQGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFAIAQFRFLERLLVVHGHWCYKRIALMICYFFYKNIAFGLTIFYFEAFTGFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVPSEVCLQFPALYQQGPKNLFFDWYRILGWMGNGLYASLVIFFLVVTIFYDQAFRVDGQTADMAAVGTTMFTCIIWAVNCQIALTMSHFTWIQHVFVWGSIVTWYIFLFLYGMISPEYSNSAYQILVEALAPAPIYWTVTLLVAVTCNLPYFAHISFQRCFHPMDHHIIQEIKYYKKDIEDQHMWTRERSKARQETKIGITARVEAKIRQLKGRLQKKQSMLPMLSPS* 1232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1021 1231 CDD P-type_ATPase_APLT_Dnf-like 60 1048 - -
Apr10g1021 1231 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1227 - -
Apr10g1021 1231 Gene3D - 591 724 IPR023299 GO:0000166
Apr10g1021 1231 Gene3D - 434 470 IPR023299 GO:0000166
Apr10g1021 1231 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Apr10g1021 1231 PRINTS P-type cation-transporting ATPase superfamily signature 888 907 - -
Apr10g1021 1231 SUPERFAMILY Calcium ATPase, transduction domain A 147 286 IPR008250 -
Apr10g1021 1231 SUPERFAMILY Calcium ATPase, transmembrane domain M 51 1164 IPR023298 -
Apr10g1021 1231 Pfam Cation transport ATPase (P-type) 546 651 - -
Apr10g1021 1231 Gene3D - 113 288 - -
Apr10g1021 1231 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Apr10g1021 1231 Gene3D - 725 928 IPR023214 -
Apr10g1021 1231 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 858 969 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr10g1021 1231 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 523 686 IPR023299 GO:0000166
Apr10g1021 1231 Pfam Phospholipid-translocating ATPase N-terminal 42 109 IPR032631 -
Apr10g1021 1231 SUPERFAMILY HAD-like 417 943 IPR036412 -
Apr10g1021 1231 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1227 - -
Apr10g1021 1231 Pfam Phospholipid-translocating P-type ATPase C-terminal 916 1166 IPR032630 -
Apr10g1021 1231 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1174 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Apr10g1021 1231 Coils Coil 448 468 - -
Apr10g1021 1231 SFLD C1.7: P-type atpase like 404 939 - -
Apr10g1021 1231 SFLD p-type atpase 404 939 IPR044492 -
Apr10g1021 1231 Gene3D - 419 433 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1021 Apr-Chr10 22617809 22624660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1021 1 1229 Primary Pumps ATPases AT1G17500 75.610 0.0 1957
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1021 K01530 - gmx:100784621 2288.84