Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1020 ATGGGTAGTGTTGCATCTTCCTCTCTTCACAAAAGGTACGATGTTTTTCTAAGCTTTAGAGGTGAAGACACCCGCAACAACTTCACAAGCCACCTTTACACTGCCTTGTGCCAAAAATCAATAAAAACATTCATAGATTACAAGGTTCATAGGGGAGACCAGATATCCTCAACAATCCTCAAACAAATCGAGGATTCGTACATAGCTTTGGTGGTTTTTTCTGAAAACTATGCTTCCTCTAAGTGGTGCTTGGAGGAACTGGTGAAAATACTAGCATGCAAGGAAGATAAGGGACAAAGTGTTATACCCGTGTTTTATAAAATTGACCCATCACATGTTCGAACACAATCTGGGAGTTACAAAGAAGCATTTGTTAAACATGAGAAAGATGAAGATTGTAGGCAGAAAGTGTTGAAATGGAAGGCTGCACTCACTCAAGCTGCTAATTTAGCTGGTTGGGACTCTTGCAACCATCCGGACGAATCTCAACTCGTTCAGAAAATTGTGAATGACATTTTGCAAAAGCTATATAGAAGGTACCCAAGTGAATGGAAAGGTCTTGTTGGAATTGAGGATAGTGTTAGACATGTAGAATTGTTACTGGAAAAAGTTCCAATAGTTGGAATATGGGGCATGGGTGGCATAGGAAAGACAACTATTGCTAAGGCTGTGTACGCCAAACATTCTTTCCTCTTTGAAAGTTGTTGCTTCTTGGAAAACGTAAGAGAAGAATCACAAAAGCATGGACTTAGACATTTGTGTGATAAACTTCTCATTAATCTTCAAAAGGAAGAAAATTTCATCGGTAGCAGCTTGAAAGTTGAAAGCTCTACATTTGAGATGAGAAGACTCAATAATAAGAAAGTTTTCATTGTCCTTGATGATGTGATTAGTTCTGAGCAATTAGACTATTTAGCTAGTGAATGTGATTCTTCCTTGGGGTCTGGTAGTAGAGTCATAATTACAACAAGAGATAAGCATTTGTTGATAGGAAGAGTTGATGAAATACACGAGGTCAAGGGATTGAATTCTCAAAACTCTCTTAAGCTTCTTAGCTTAAATGCCTTCAAAGAAAATCACCCCAAAGTGGGATATGAAGAGCTATCAGAGAGCGCAGTTATCTATGCAAAGGGCATTCCACTAGTTCTCAAAGTTTTGGGTTCACTTTTACATTCCAAGAGTATAGAAACATGGGATAGTACATTGAGAAAACTAGCAAAGTATCCCAATGTGCGCATCCAAAAAGTTTTGAAATTAAGTTATGATGAATTAGATGATGTAGAGAAATTCATATTTCTAGACATTGCATTCTTCTACAAAGGAGAAGACAAAGATACTGTCATAAGGCTACTAGATGCTTGTGGTTTCTATGCTGCTAGTGGAATCGACACCCTTATAGATAAAGCTCTTGTTACTATATCAAATGGCAACAGAATACAAATACATGATTTGATACAACAAATGGGTTGGGAAATAGTTCGTCAAGAATCTCCAACAGACATTGGAAGGCGTAGCCGATTGAGGGACACTGAGGAAGTCTATAATGTATTGAAAAATAACCAGGGAACTGATGCAGTAGAAGGTATCATATTGGATTTGTCTGAAATTGGAGATTTAAAATTGTGTGATGACACGTTCAAAAGAATGACTAAACTAAGATTTCTTAAATTTCATTCTGACAAGAGATCATGTAATGTGTACCTTCCTAGTGGTCTTAAGCAATTTTCTGGTCAATTAAGGTATCTTGAGTGGAATGGATACCCTTTGGACTCTCTGCCATCTAGTTTCTGCCCTGAGAAGCTTGTTAAACTTTACATGCCACACAGCCATGTTCAAAAACTTTGGGATGGGTTGCAGGATTTTGTCAATTTAGAAGGAATAGATCTTTATGGATCCAAACAGTTGATTGAGCTCCCAGATTTCTCAAAGGCATCGAAGCTTAAATGGACAGATCTTTCCCTTTGTGAAAGTTTGAGTTATGTTCATCCCTCCCTTTTATCTCTCCACTCACTGGTTACTTTGAGACTATCTAAATGCAAAAGTCTCAAGACTCTTCAAAGCAATATTCATCTAAAATCACTTGAATATCTCTTTGTTGATGGTTGCTGGAGTCTCGTTGAATTTTCATTGACATCAGAGAAAATGAGACAGTTGGATTTTAGAGGGACATCAATCAAAACATTGTCCTCGTCCATTGAGCTTTTCAGCAACCTTGAAGAGCTCTATCTCTGTGACTCACTCAAGAATCTTCCAAACAAATTGTCTTCCATTAAATCTCTTAAGGATCTTAGCCTTGCTAATTGCAGACAGCTTGACACATCAAATTTGCACATACTACTTGATGCTTCAAGGTCTCTCCGAAGACTGTGTCTGAATTACTGTCACATATTTGAACTCCCTCACAACATAAATGTCTTATCATGGTTACATGAACTAAGGCTAGATGGAAGCAGCGCGGAGAGTTTGCCTTCAAGCATCAAGCATCTCTCAGGTTTACAAATTCTTTCCTTAAGAGATTGCAAGAGGCTTTGTTCTCTACCAGAGCTTCCACCATCCATTAAAAAACTAGATGCATGTAACTGCATATCATTAGAGACGGTTTTCACCATAGCCACTTTTAGATTGCCAAAAAGAAATGACAACAAGCGCTTTTTATTCCAAAATTGTGTGAAACTGGATGAACATTCAGTCTATGGTATCGTGGAGCATGCACACTTCACAATGAAGGAAGCAGCATATGGGAATGTCTTGATAAGAGATGAAATTCCCATATGGGGACCTAATGACTATAACCGTGGTGCATTTTGTTTGCCAGGAAGTAGAGTTCCTGATTGGTTCAAATATCAAACCAAAGAAGCTTCATTAACTGTTGATTTTTCTTCATCTTCTGACTTGTTGGGTTTCCTTCTATCTGTAGTGTTTGGTAAGTTCCCTTCAAATGAAAAGTATGCTGCTACCATTGGATGTGAATGCTACTTAGTAGATGGTGGAAAGGTGGGTTACACAAGCAACTGGTATAATACAGATATCACACAATTGAAGTCAGATCATGTTTATCTATGGTATGATCCTTTTTTTTGTGACATGGTACTGATGGCAGTGAAAGAACGTGGGGTTATAAGTGATCATAGCAATATTTATAACCCAAAAGTTTCATTTAAGTTTGTTGTTACAATTTATAAATGTGGTATGAATGTGAAAGACCATGGTTGCTTGATTGGTATGAAGGAGTGTGGAGTTTGTCCAATATATGCCTCAGAGCATCACAGTTTCATGAATCAAATGAAATTGGAGTTAAAGTACAGTGACATGACCAAGAGAAGTAGGGAGGAGCAGGAGAAGGAGCACTTCCCTCCAACGAAGAGATTGAAGGAATCTTCAATGATTGAACTTGATGATTAA 3402 0.3789 MGSVASSSLHKRYDVFLSFRGEDTRNNFTSHLYTALCQKSIKTFIDYKVHRGDQISSTILKQIEDSYIALVVFSENYASSKWCLEELVKILACKEDKGQSVIPVFYKIDPSHVRTQSGSYKEAFVKHEKDEDCRQKVLKWKAALTQAANLAGWDSCNHPDESQLVQKIVNDILQKLYRRYPSEWKGLVGIEDSVRHVELLLEKVPIVGIWGMGGIGKTTIAKAVYAKHSFLFESCCFLENVREESQKHGLRHLCDKLLINLQKEENFIGSSLKVESSTFEMRRLNNKKVFIVLDDVISSEQLDYLASECDSSLGSGSRVIITTRDKHLLIGRVDEIHEVKGLNSQNSLKLLSLNAFKENHPKVGYEELSESAVIYAKGIPLVLKVLGSLLHSKSIETWDSTLRKLAKYPNVRIQKVLKLSYDELDDVEKFIFLDIAFFYKGEDKDTVIRLLDACGFYAASGIDTLIDKALVTISNGNRIQIHDLIQQMGWEIVRQESPTDIGRRSRLRDTEEVYNVLKNNQGTDAVEGIILDLSEIGDLKLCDDTFKRMTKLRFLKFHSDKRSCNVYLPSGLKQFSGQLRYLEWNGYPLDSLPSSFCPEKLVKLYMPHSHVQKLWDGLQDFVNLEGIDLYGSKQLIELPDFSKASKLKWTDLSLCESLSYVHPSLLSLHSLVTLRLSKCKSLKTLQSNIHLKSLEYLFVDGCWSLVEFSLTSEKMRQLDFRGTSIKTLSSSIELFSNLEELYLCDSLKNLPNKLSSIKSLKDLSLANCRQLDTSNLHILLDASRSLRRLCLNYCHIFELPHNINVLSWLHELRLDGSSAESLPSSIKHLSGLQILSLRDCKRLCSLPELPPSIKKLDACNCISLETVFTIATFRLPKRNDNKRFLFQNCVKLDEHSVYGIVEHAHFTMKEAAYGNVLIRDEIPIWGPNDYNRGAFCLPGSRVPDWFKYQTKEASLTVDFSSSSDLLGFLLSVVFGKFPSNEKYAATIGCECYLVDGGKVGYTSNWYNTDITQLKSDHVYLWYDPFFCDMVLMAVKERGVISDHSNIYNPKVSFKFVVTIYKCGMNVKDHGCLIGMKECGVCPIYASEHHSFMNQMKLELKYSDMTKRSREEQEKEHFPPTKRLKESSMIELDD* 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1020 1133 PRINTS Disease resistance protein signature 206 221 - -
Apr10g1020 1133 PRINTS Disease resistance protein signature 283 297 - -
Apr10g1020 1133 PRINTS Disease resistance protein signature 376 390 - -
Apr10g1020 1133 PRINTS Disease resistance protein signature 755 771 - -
Apr10g1020 1133 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 435 IPR027417 -
Apr10g1020 1133 SMART till_3 12 150 IPR000157 GO:0007165
Apr10g1020 1133 Pfam Leucine Rich Repeat 600 617 IPR011713 -
Apr10g1020 1133 Gene3D - 341 425 IPR042197 -
Apr10g1020 1133 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 1108 IPR044974 GO:0006952
Apr10g1020 1133 Pfam TIR domain 13 190 IPR000157 GO:0007165
Apr10g1020 1133 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 153 IPR035897 -
Apr10g1020 1133 Gene3D - 7 175 IPR035897 -
Apr10g1020 1133 Pfam NB-ARC domain 205 430 IPR002182 GO:0043531
Apr10g1020 1133 Pfam C-JID domain 937 1087 IPR045344 -
Apr10g1020 1133 MobiDBLite consensus disorder prediction 1107 1133 - -
Apr10g1020 1133 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 10 1108 - -
Apr10g1020 1133 Gene3D - 176 334 IPR027417 -
Apr10g1020 1133 SUPERFAMILY L domain-like 481 865 - -
Apr10g1020 1133 ProSiteProfiles TIR domain profile. 11 176 IPR000157 GO:0007165
Apr10g1020 1133 Gene3D Ribonuclease Inhibitor 495 711 IPR032675 -
Apr10g1020 1133 Gene3D Ribonuclease Inhibitor 712 892 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1020 Apr-Chr10 22608632 22613341 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1020 8 812 WRKY Transcription Factor Family AT4G12020 32.575 1.08e-101 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1020 - - aprc:113850201 2239.15