Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1018 ATGTTTCACTCTCCCAGAAAGTACGATGTATTCATTAGCTTCAGAGGTGAGGACACCCGCACCACATTCACTAGCCATCTTCGGGATAGTCTCTACAAGCAAAATATCCAAACATATATTGATTATGAGCTTAAAAAAGGAGATGAGATATGGCCAACACTTGCCAAAGCAATCCAAGACTCTCATATATCCATTGTTATTTTCTCAGAAAACTTTGCTTCCTCAAAATGGTGCTTGGATGAACTCCTCAAAATACTCGAATGTAGAGAAAATCAAGGACAGGTAGTTATACCTGTGTTCTATAAAATAGATCCATCAGATGTACGTTACCAGATCGGTACATACAAAAAAGCATTTGCAAAACATGAGAGAGCTGTTAGGAATAATGAATCCTTCTTAAAAGTTTCTGCATGGAAAGAAGCTCTAACTAAAGCTGCCAATATATCTGGATGGGACTCTAGCACCCATAAGAATGATTCTGAAGTCATCCAGAACATTGTGCAAGATGTTTGGCAAAAGCTGTCCCTTAAGTATCCTAAGGAACTTAAAGGCCTTGTTGAGATTGATGAAAACAGTAATTACATTGAATCATTACTGAAAGAATTTCCAAGAATTGGAATTTGGGGCATGGGTGGTATAGGTAAAACTACCATTGCTAGATCTCTGTTTGCCAAACACTTTCCAGAATATGAGAGTGTCTGCTTCTTGGAAAAAGTGAGAGAAGAATCAGAAAAGTTGGGAATAACATCTGTACGTAAGAAGCTTCTTGGTGAGCTATTAAAGCAACAAATCACCACATCTGATACTCTTGGAACCACATTCATAGAGAGGAGGCTCAGTAGCAAAAGAGTTTTGATTGTACTTGATGATGTGGACAATGCTACACAATTAGAATATTTGTGTGGAGGACTAGATGACCTTGGACCAGATAGCAGACTCATCATCACAACAAGAGATAAGCATACGCTTAGGGGAAGCGTTAATAGGATATATGAGGTCACAAAATGGACGCATCCAGAATCTCTAAAGCTTTTTAGCTTAGGAGCCTTCCAACAAAGCCTTCCTAAAGAGGGTTATGAACATCTCTCAGAAAGGGCAGTTGCATATGCAGGAGGCATTCCATTAGCTTTAAAAGTTCTAGGTTTACATTTTCGTTCCAGAAGTATTGAATTTTGGGAATCTGAATTGAGTCATCTTGAGAACAAGGACGAATCCTGGGATGAAATTCGAGAAGTGTTACAAGTGAGCTATAAGGGATTGCAAAAGCGAGAGCAGGCAATATTTCTGGATATTGCATTCTTTTTCAAAGACCAAAATAAGGATTCTGTCATAAGGATACTAGATGCCTGTGGTTTCAGTGGTACTAGTGGAATACAAATCCTTCAAGATAAAGCTCTTATAACTATTTCAAACAGCAATAGAATAGAAATGCATGACTTGCTACAAAAAATGGGCCTGGATATAGTTCGAGAAGAATTTAGTAATGACCCTGGAAGACGTAGCCGATTGAGGGAAATTAAAGATGTTCCTGATGTACTTAAAAATAGCAAGGGGACTGATGCAGTTGAAGGCATAACATTAGATTTGTCTCAAAGAGTAGATTTTCACTTGCCAGCTGACACATTCAACAGGATGACTAAATTACGAATTCTTAGATTATATGTCCCATCGGATAAGAAAAGATTAGCTAATGTATGCATCCCTCGAGTCTTTGAGCAGTTTTCCAATGAATTGAGGTACCTTGAGTGGAATGGATACCCTTTGAAGTTTCTTCCACAAAATTTTTGTCCTAAGTCTCTTGTTGAGATTCACATGCCGTATAGTCACGTTAAAGAGCTTTGGCAGGGAATGCAGGATCTTGTGAATTTAGAGGCAATGGACCTAAGTGAATGCCAACAGTTGCAAAAGCTTCCAGATTTGTCCAGAGCCTCAAAGCTTAAATGGGTGGATCTCTCTGGATGTGAAAGCTTACTTGATGTTCATCCATCTATTTTGTCCCTCGACACACTTGAAACTTTGATGTTGGATAGGTGCAAAAAACTGAATACTCTCAAAAGTGAGAAGCATTTAAAATCACTTGTGAATATCAATGTCAATGGGTGCATAAGCCTAAAGGAGTTTTCGGTGTCATCAGGCTCAATGGAAAGGTTGGATTTAAGCACTACAGGAACCAAAAAATTGCACTCATCAATTGGCCGTCTAAGCAAACTTAAGTGGCTCAATCTTGAGTATTTAAGATTGGAGAATCTTCCAGAAGAGTTATCTTTCTTGATATCTCTTGAGGAGCTTAGGATTTCTAACTGCAAACTAGTTAACAAGAAAAAGCTGCATGTCCTGTGTGATGGGTTACGGTCCTTAAAAGTACTACATTTGAAGGATTGTTATAAGTTGTTTGAACTCCCTGACAACATTAGCTTCTTATCATCATTACTCGAGTTAAGACTCGATAGAAGTGGTATTGAGATGTTGCCTGAAAGTATCAAGCATCTTCAAGAGCTGGAGATTCTGTCCTTATTGAATTGCACAAAGCTTCAATTGCTACCTGAACTTCCACCTTATATCAAACAGTTACATGTTGTCAACTGTAAATCATTGGTGATAGTGTCCACTTTGAAGACTTTTTCAGTCATGATGATAGGAAAGGAGAAATTCATATCATTTAAAAATGGAAAGAAACTGAATGAACATTCTCTCTTTCGGATCATTGAAGGCTTAATGTTTACAATGAAAAGTGCTGCATTTCACAATGTCTTAGTAAGAATGCTAAGTGTTGATACCCGCAGCTATAATTATAACAGTGTTGAGGTTTGTTTCCCAGGATGTAGTGTTCCAAGACAGTTCACATATCAAACCACAGGTTCCTCCATCACCATTGAACTTCCTGATCCTAAACTACGTTCTAACTTGTTAGGATTCATTTACTCTGTGGTTCTTCCTTCATCCCATGAAATGAAGCAGCATGGTGTTATAATCCAATGTCAGTGTCGTGAGAAAGATGGTAAAAAGGGAAATGCAACTACGTGGCATCATAAAGCCATCAAGGGATTGAATTCGGATCATGTTTTCGTATGGTATGATCCATTCCATTGTGACAGCATCCTCAGACATCGTAAACAAAGTATTATTTGCTTTGAGTTCTTTGTTACAATTGAAAGTGAGGAACTTCTTGTTGGTGATTTGGTTAGTATCAAACGATGTGGGGTCCACCTAATTTGGTCCTCAATGTTAGAGGTCCATAGTTTCTTACGAGAATTAAACTTGGAATTGAATTTGAAATTGGATTTGGGGGTGAAATTGGCATTAGCATTAGAAATGGAGCAGGGTCGAGGGAATTGGGAAGATAACAAGAGATTACTTCATGCATTGGAGAATGGAGATGAAGTGGATGAATCTTTGAAAATGGAGTTAGAATCACGACGTCGTGGGATTTTAATGTTAATTGAGACAAAAAGTATTGGAAGCAAATTGTGA 3471 0.3812 MFHSPRKYDVFISFRGEDTRTTFTSHLRDSLYKQNIQTYIDYELKKGDEIWPTLAKAIQDSHISIVIFSENFASSKWCLDELLKILECRENQGQVVIPVFYKIDPSDVRYQIGTYKKAFAKHERAVRNNESFLKVSAWKEALTKAANISGWDSSTHKNDSEVIQNIVQDVWQKLSLKYPKELKGLVEIDENSNYIESLLKEFPRIGIWGMGGIGKTTIARSLFAKHFPEYESVCFLEKVREESEKLGITSVRKKLLGELLKQQITTSDTLGTTFIERRLSSKRVLIVLDDVDNATQLEYLCGGLDDLGPDSRLIITTRDKHTLRGSVNRIYEVTKWTHPESLKLFSLGAFQQSLPKEGYEHLSERAVAYAGGIPLALKVLGLHFRSRSIEFWESELSHLENKDESWDEIREVLQVSYKGLQKREQAIFLDIAFFFKDQNKDSVIRILDACGFSGTSGIQILQDKALITISNSNRIEMHDLLQKMGLDIVREEFSNDPGRRSRLREIKDVPDVLKNSKGTDAVEGITLDLSQRVDFHLPADTFNRMTKLRILRLYVPSDKKRLANVCIPRVFEQFSNELRYLEWNGYPLKFLPQNFCPKSLVEIHMPYSHVKELWQGMQDLVNLEAMDLSECQQLQKLPDLSRASKLKWVDLSGCESLLDVHPSILSLDTLETLMLDRCKKLNTLKSEKHLKSLVNINVNGCISLKEFSVSSGSMERLDLSTTGTKKLHSSIGRLSKLKWLNLEYLRLENLPEELSFLISLEELRISNCKLVNKKKLHVLCDGLRSLKVLHLKDCYKLFELPDNISFLSSLLELRLDRSGIEMLPESIKHLQELEILSLLNCTKLQLLPELPPYIKQLHVVNCKSLVIVSTLKTFSVMMIGKEKFISFKNGKKLNEHSLFRIIEGLMFTMKSAAFHNVLVRMLSVDTRSYNYNSVEVCFPGCSVPRQFTYQTTGSSITIELPDPKLRSNLLGFIYSVVLPSSHEMKQHGVIIQCQCREKDGKKGNATTWHHKAIKGLNSDHVFVWYDPFHCDSILRHRKQSIICFEFFVTIESEELLVGDLVSIKRCGVHLIWSSMLEVHSFLRELNLELNLKLDLGVKLALALEMEQGRGNWEDNKRLLHALENGDEVDESLKMELESRRRGILMLIETKSIGSKL* 1157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1018 1156 Pfam TIR domain 7 183 IPR000157 GO:0007165
Apr10g1018 1156 Gene3D Ribonuclease Inhibitor 714 878 IPR032675 -
Apr10g1018 1156 Gene3D Ribonuclease Inhibitor 499 713 IPR032675 -
Apr10g1018 1156 Gene3D - 5 170 IPR035897 -
Apr10g1018 1156 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 955 IPR044974 GO:0006952
Apr10g1018 1156 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 431 IPR027417 -
Apr10g1018 1156 Pfam C-JID domain 938 1075 IPR045344 -
Apr10g1018 1156 PANTHER NB-ARC DOMAIN PROTEIN 6 955 - -
Apr10g1018 1156 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 151 IPR035897 -
Apr10g1018 1156 ProSiteProfiles TIR domain profile. 6 174 IPR000157 GO:0007165
Apr10g1018 1156 Gene3D - 337 421 IPR042197 -
Apr10g1018 1156 Gene3D - 171 330 IPR027417 -
Apr10g1018 1156 Pfam NB-ARC domain 204 418 IPR002182 GO:0043531
Apr10g1018 1156 PRINTS Disease resistance protein signature 204 219 - -
Apr10g1018 1156 PRINTS Disease resistance protein signature 278 292 - -
Apr10g1018 1156 PRINTS Disease resistance protein signature 370 384 - -
Apr10g1018 1156 PRINTS Disease resistance protein signature 618 634 - -
Apr10g1018 1156 SUPERFAMILY L domain-like 493 867 - -
Apr10g1018 1156 SUPERFAMILY "Winged helix" DNA-binding domain 407 513 IPR036390 -
Apr10g1018 1156 SMART till_3 7 148 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1018 Apr-Chr10 22589323 22593682 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1018 2 813 WRKY Transcription Factor Family AT4G12020 34.898 4.05e-108 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1018 - - cam:101489032 1234.94