Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1017 ATGTCTTCCTCTACCAAAAGCTACGATGTGTTCATTAGCTTCCGAGGAGAAGACACACGTGCCAACTTCACCAGTAATCTCCATTCGGCTCTGCAAATTAAGAGTATCCGTACATACATAGACTATGAGCTTAATAGAGGAGATGATGTCGAAGAAGCACTTCCCCAAGCAATCCAAAACTCCGAGATCTCGATCGTCGTTTTCTCGGAAAACTACGCTTCATCGAAATGGTGCTTGAAAGAACTTGTTCAAATTATGAATTGCAGAAATTGTGAGGGGCAAGTTGTTATACCTGTCTTCTACAATATTGACCCATCGCACGTGCGGAACCAAACTGGTAGTTTTGAGAAAGCATTTGCCACACACGTGCAAGATCTCACAAGCAATGAACCCTCACAGATCGAAGACGAAGTTTCTAAGTGGAAAGATGCTCTCCGCAAAGCTGCAAATTTATCTGGCTGGGATTCTCGAACCTTTATGAATGATTCTCAAGTCATACAAAACATTGTAAATGATGTCTTGCAAAAGTTATACCTGAAATACCCTAATGAACTGCAAGGTGTTATTGGAATTGAAAATTACTATGATGAAATAGAACCATTGCTCGAAAATTTTCGAAGAATTGGAATTTGGGGCATGGGTGGAATAGGAAAGACAACCACTGCTAAAACAATATTTTCCAAACACTTCCCCAAATATGATAGTGTATGCTTCTTGTCAAATGTAAGAGAAGAATCACAGAGGCTCGGACTGACATATACACGAGACAAGCTTCTCTCTGAGCTACTAAAGGAACCGATTACAACCTCAAATTTTAGTGGATCTGCATTCATGAGGAGGAGGCTTAGTAGTAAAAAAGTTTTCATTGTACTTGACGACATGGCTAGTTTTCGTGATTTGGATTATTTGTATGGAGAACTTGGTGACTTGGGAAACGGTAGTACACTCATTGTAACAACAAGAGATAAGCATTTGCTTAAAGGAAGAGTTGACAAGATATGTGAGGTCAAGAAACGGAACTTTGAAGAATCTCTAGAGCTTTTTTGCTTAGAAGCCTTCAAGCAAAGCAACCCTAAAAAGGGTTATGAGCATCTCTCAGAAAGGGCAGTTAAATATGCAGGAGGCAATCCATTAGCTCTAAAAGTTTTGGGTTCACATTTTCATTCAAGAAAAATTGAATTTTGGGAATGTGAATTGAGTAATTTTGAGAAGAAGAAGGAATCCTGTGACGAAATTCTTGAAGTGTTACAAGTGAGCTATAATGCATTACGAAACGGAGAGAAGGAAATATTTCTAGATATTGCATTCTTTTTCAAAGACGAAGATGCAGATTTTGTCATAAAGATACTGAATGCTTGTGGTTTCAATGCTACTAGTGGTATAGAAATCCTTCAAGATAAAGCTCTGGTAACTATTTCAACAAGCAACAAAGTACAAATGCATGACTTGCTACAAGAACTGGGTTTGGATATAGTTCGAAAAGAATTTAGTAAAGACCCTGGAAGACGTAGCCGACTGAGGAATATTGAAGAAGTTCGTGATGTACTTAAAAATAACAAGGGGACTGATGCAGTTGAAGGAATAACATTAGATTTGTCTGCAAATGTAGATTTGCAATTTACTGCTGATACCTTTAACATGATGTCTAAATTAAGACTTCTTAGATTATATGTTCCCTTGGGTAAGACGAGATTAGCTAATGTTGAACATCCTGAAGTCTTTGACCGGTGTTCTGATGAACTAAGGTACCTTGAGTGGAATGGGTACCCTTTGAAGTCTCTTCCCCAAAATTTTTGTGCTATCTTTCTTGTTGAGATTCGCATGCCGCACAGCAATGTTGAAGAGCTTTGGCAAGGGATGCAGGATCTGATGAATTTAGAGCAAATTGACCTAAGTGAATGCAAAAAGTTGGTGATGCTCCCAGATTTGTCTAGAGCATCAAAACTTAAAACGGTGGTTCTCTCCGGTTGTGAAAGGTTGTGTGTTGTTCATCCATCTCTTTTATCTGTGGACACACTTAAAACTTTGATATTGGATAGGTGCAAAAAATTGAAGAGTCTCAAAAGTAAAAATCATTTTAGATTTTTGGAGGATCTCAGTGTCAACTACTGTTCAAGCCTTGAGGAATTTTCAATATCATCAGAATTAATTAAACAATTGGATTTAAGCACGACAAGTGTAAAAATATTAGACTCAACAATCGGTCGTCTAAGCAAGCTTGAGAAGCTGAATTTAGAAGGTTTACAACTTAAGAATCTTCCAAATGAATTATGTTGTCTAATATCTCTTCATGAGCTTAGGATTTCTAAATGTGGAAGTGTGATTAACAAAGAGATGCTGCATGACCTATGTGATCGCTTAAGACTTTTAAATGTACTACATTTGAAGGAATGTGATAAGTTGTTTGAACTCCCTGACAACATTAGTGAGTTGACATTTTTACATAAAGTAAGTCTCGATGGAAGTAGTATTGAGAGGTTGCCTGAAAGCATCAAACATCTTCCAAGGCTAGAGATTTTGTCCTTACAGAATTGTAGAAAGCTTCAGTTTCTACCTGAGCTTCCACCACTCATCAAAACTCTTAATGTTGGCAATTGTAAATCATTGGTGACCGTATCCCCTACAAAACATTTTTCAGTCCACTTGATCGAAAAGAAATGCGTTTCATTTGAGAATGGAATGAAACTGAGTGAATTTTCACTCTGTTCAATAATGGAAGACGCCTTATTTGTGATGAAAAGTGTGGCATTTCACGATCTGTTAAAAAGATATAATGGTTTTAAAGCCAACAGCAAAGTTGAGGTTTGTTTACCAGGAAATAGTGTCCCACGTACGTTTACATATCGAACCACGGAGTCTTCCATTACCATTGGACTTGCTAATCCTGACCAATTTTCCCACTTGGTAGGCTTGATGTACTCTATTGTTCTTTCTCCATCCCCTTGGATGAAGCATCAAGTTACTTTCATCCGATGTCAATGCTATAGGGCAGATGGTACAAAGGTTGGAAATGCCACTACATGGCAACATAAACCCATCAGGAAATTGAATTCAGACCATGTTTTTCTATGGTATGATTGTTTTCATTGGTACAACATTTTCCAAGGACATGCAAAATTTCTTGTTAGCAAGACACATGTAGAAAATCTGCGTTTTCAGTTCTCTGTTATACCTTATAGAAGGGCAAGTAATGACCAGATCAGTATAAAAGAGTGTGGGATTCACCTAATAGGTTCCTCAAGGTCAGAGTTTTACAATTGCTTATATGAATCAGACATGACATTGGAGTCCAAGATTATGTGTGGGTTGGAATTTGACATAGCACATAGATTTAGGGAAGTGGATTGGAGATTATATTGTGCATTGCGGTATAATGATTTTGCAACAGATGCAGAGGTTAAAAAAGAGCAAGAGTCAAGACGTAGAGCAATGTTATGGGCAACTAAAAAGTTAAATGAAAAAAAAGCATGGTACAAGGACAGCCACTGA 3489 0.3769 MSSSTKSYDVFISFRGEDTRANFTSNLHSALQIKSIRTYIDYELNRGDDVEEALPQAIQNSEISIVVFSENYASSKWCLKELVQIMNCRNCEGQVVIPVFYNIDPSHVRNQTGSFEKAFATHVQDLTSNEPSQIEDEVSKWKDALRKAANLSGWDSRTFMNDSQVIQNIVNDVLQKLYLKYPNELQGVIGIENYYDEIEPLLENFRRIGIWGMGGIGKTTTAKTIFSKHFPKYDSVCFLSNVREESQRLGLTYTRDKLLSELLKEPITTSNFSGSAFMRRRLSSKKVFIVLDDMASFRDLDYLYGELGDLGNGSTLIVTTRDKHLLKGRVDKICEVKKRNFEESLELFCLEAFKQSNPKKGYEHLSERAVKYAGGNPLALKVLGSHFHSRKIEFWECELSNFEKKKESCDEILEVLQVSYNALRNGEKEIFLDIAFFFKDEDADFVIKILNACGFNATSGIEILQDKALVTISTSNKVQMHDLLQELGLDIVRKEFSKDPGRRSRLRNIEEVRDVLKNNKGTDAVEGITLDLSANVDLQFTADTFNMMSKLRLLRLYVPLGKTRLANVEHPEVFDRCSDELRYLEWNGYPLKSLPQNFCAIFLVEIRMPHSNVEELWQGMQDLMNLEQIDLSECKKLVMLPDLSRASKLKTVVLSGCERLCVVHPSLLSVDTLKTLILDRCKKLKSLKSKNHFRFLEDLSVNYCSSLEEFSISSELIKQLDLSTTSVKILDSTIGRLSKLEKLNLEGLQLKNLPNELCCLISLHELRISKCGSVINKEMLHDLCDRLRLLNVLHLKECDKLFELPDNISELTFLHKVSLDGSSIERLPESIKHLPRLEILSLQNCRKLQFLPELPPLIKTLNVGNCKSLVTVSPTKHFSVHLIEKKCVSFENGMKLSEFSLCSIMEDALFVMKSVAFHDLLKRYNGFKANSKVEVCLPGNSVPRTFTYRTTESSITIGLANPDQFSHLVGLMYSIVLSPSPWMKHQVTFIRCQCYRADGTKVGNATTWQHKPIRKLNSDHVFLWYDCFHWYNIFQGHAKFLVSKTHVENLRFQFSVIPYRRASNDQISIKECGIHLIGSSRSEFYNCLYESDMTLESKIMCGLEFDIAHRFREVDWRLYCALRYNDFATDAEVKKEQESRRRAMLWATKKLNEKKAWYKDSH* 1163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1017 1162 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 154 IPR035897 -
Apr10g1017 1162 Pfam Leucine Rich Repeat 602 619 IPR011713 -
Apr10g1017 1162 SUPERFAMILY L domain-like 530 874 - -
Apr10g1017 1162 Gene3D Ribonuclease Inhibitor 489 717 IPR032675 -
Apr10g1017 1162 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 952 IPR044974 GO:0006952
Apr10g1017 1162 ProSiteProfiles TIR domain profile. 6 177 IPR000157 GO:0007165
Apr10g1017 1162 Gene3D - 178 334 IPR027417 -
Apr10g1017 1162 SMART AAA_5 204 340 IPR003593 -
Apr10g1017 1162 Pfam NB-ARC domain 207 421 IPR002182 GO:0043531
Apr10g1017 1162 Gene3D - 4 177 IPR035897 -
Apr10g1017 1162 PANTHER NB-ARC DOMAIN PROTEIN 12 952 - -
Apr10g1017 1162 Gene3D - 340 424 IPR042197 -
Apr10g1017 1162 PRINTS Disease resistance protein signature 207 222 - -
Apr10g1017 1162 PRINTS Disease resistance protein signature 281 295 - -
Apr10g1017 1162 PRINTS Disease resistance protein signature 373 387 - -
Apr10g1017 1162 PRINTS Disease resistance protein signature 621 637 - -
Apr10g1017 1162 SMART till_3 7 151 IPR000157 GO:0007165
Apr10g1017 1162 Gene3D Ribonuclease Inhibitor 718 903 IPR032675 -
Apr10g1017 1162 Pfam TIR domain 8 183 IPR000157 GO:0007165
Apr10g1017 1162 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 434 IPR027417 -
Apr10g1017 1162 Pfam C-JID domain 937 1077 IPR045344 -
Apr10g1017 1162 SUPERFAMILY "Winged helix" DNA-binding domain 410 496 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1017 Apr-Chr10 22579499 22586581 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1017 3 817 WRKY Transcription Factor Family AT4G12020 33.413 5.36e-100 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1017 - - lja:Lj3g3v2666470.1 1152.89