Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0996 ATGGGACTGCAGCTGATTTTCCTGTTAATTAAGCTACATTTAGTTGTCAGCACTCAACAACTTCATGAATATGCAGCTGCCACGCTGCTCCATTCCAGTGCCAGAAGCCATTTTGGCATTGCAATCCCACCATCAAAGTCATCTTCTGAAATTCCTAGTATTGCACACCCACCTTCAGAGTCAACTTCTGATGTACCTGAAAGTATTGCACTTCCACCTTCCAAGTCAATTTCCAAAGCTCCTACAAAGATAAGGACACATGGTTCTGTTGATTCTCCAATATCACATCATAAACACCACTATTCCAGAAGAAAGTCGCACAACCAAACTCCAGCACCAGCATACCCAATCCAGGCTCCTAGTTACAGTCATCAAGGTCCCTCAGTCTTAAAGTCAGATCCTCCTTTCTCTTCACCAAAGAGTGGGGATATTCTTGCACCTGCACCACCACCAGCAATTTGGTTAGGTCCCATGGATGGTTCATCGTTGAAGAAGATAAAGACTCCACCACCAGCATATGAATTGGTTCTGCCACCTCCACTTCCTAATAAGAATTGCTTGTCGATAACTTGCTCAGATCCCTTGACATATACACCTCCGGGATCACCTTGTGGTTGTGTATGGCCCCTTCAAGTTAAACTCAGTATCAACGTTCCAATATACAATTTTTTCCCTTTGTTTTCAAAGCTAGCTGAGGAAATTGCAGCAAGTGTTCTGCTGAATCATAGCCAAGTTCGCATTGTGGGAGCTGATGCAGCTAGTCAGCAACTAGAGAAAACCACTGTTCTCATAAACTTGGTACCCAAAGGAGTAAAATTTGATGATACCATGTCATTTTTAATGTATAAGAAATTCTGGAACAAGGAGATTCTAATAGATGCTTCAGTCTTTGGTGCTTATGAAGTACTCTATGTTCATTATCCAGGTCTTCCACCCTCTCCACCTTCAGCTCCCTCAGATGCTTCTAGTATAGATGATGGGCCAAATCCAGGTTATGACAACAGTGGAACGGCAATAAAACCTTTAGGAGTAGACGTCTCAAAGAACAAAAAAGAAGGGAGTAATGGAAGAATGATTGTTATAATTGTGCTGTCATCAGTTACTGCTTTCGTAGTATTCATCAGTCTTGCTTGGCTTTGTCTCTTGAAATATCATTCTTGTGCCAATGAACGTAAAGAAATTCCAGATGGCTTAATTCGATCCTACTCCAAACAATCAAAGACTGCTAGATCAATTACTCATGGGATCACACCGGGTTCTGGATCACAGTCCTTCAATTCTGGTACAATAACATATACAGGGTCTGCTAAGATTTTTACTTTGAATGACTTGGAGAAAGCAACAAATAATTTCGATTCTTCAAGAATATTAGGAGAAGGTGGCTTTGGCCTAGTTTACAAAGGTATTCTAAATGATGGAAGGGATGTAGCAGTGAAGATTCTCAAAAGAGAGGATCGGCGTGGTGGCCGTGAATTCTTGGCAGAAGTTGAGATGCTTAGCCGCTTACACCATAGAAATTTAGTTAAATTGATAGGTATATGCATAGAAAAACAGACTCGGTGCTTAGTCTATGAGCTTGTCCCTAATGGAAGTGTGGAATCCCACTTACATGGTAAAGCAAAAACACAGTTCATCAATATTTTTGGAAGTCAAAAAGTCACCATTGCTTTTCAGAGACTGCCTTTTGAATACTCTATTTTCACAGGAGCTGACAAGGAAACTGATTCATTGGATTGGAATGCCCGGATGAAGATTGCTCTTGGTGCAGCTCGGGGATTGGCCTATCTGCATGAAGATTCAAATCCATGTGTCATACATCGGGACTTCAAGGCCAGCAACATCTTGTTGGAGTGTGACTTTACACCTAAGGTTTCAGATTTTGGATTGGCTAGAACTGCACTTGATGAGGGAAACAAACACATCTCCACACATGTCATGGGAACATTTGGCTACTTAGCTCCTGAATATGCTATGACCGGTCATCTTCTGGTCAAAAGTGATGTTTACAGTTATGGAGTTGTACTACTTGAGCTCCTAACAGGAAGAAAGCCTGTGGATTTTTCACAACCACCAGGTCAAGAAAATCTTGTGACATGGGTTCGTCCACTTCTCACAAGTAAGGAGGGTTTGCAGATGATCATAGACCCATTTGTAAAGCCAAACATTTCTGTTGATACTGTGGTAAAAGTTGCAGCCATTGCATCCATGTGTGTGCAACCAGAAGTCTCACAACGTCCTTTCATGGGTGAAGTTGTTCAGGCCTTGAAGCTGGTATGTAGTGAGTTTGAGGAAACAGACTATGTAAGATCGAGGAGTTTTCAAGAAGAGGGTATTCTAACTGGTATGAAAGGAAAGTTATCTGAAGTTTCAGGTGAAAGAGTGGAATTTTCAAAGTATCAAAACACTCTCTCTGGGTATCAATCTGGTAAAGAAAATGTAGCATTATCAGCATCAGAGTTGCTCAGAACTTCAGGTCAGGAATTTGATTCATTCAGAAGGTATTCTACATCAGGGCCTCTTACTACAGGGAAGAAAAGGCAGTTTTGGCAGAAGCTGAGAAGTTTGTCCAGAGGTAGCACCAGTGAACATGGATTTTCAACTAAACTATGGCCTGGATCCCATTAA 2625 0.4149 MGLQLIFLLIKLHLVVSTQQLHEYAAATLLHSSARSHFGIAIPPSKSSSEIPSIAHPPSESTSDVPESIALPPSKSISKAPTKIRTHGSVDSPISHHKHHYSRRKSHNQTPAPAYPIQAPSYSHQGPSVLKSDPPFSSPKSGDILAPAPPPAIWLGPMDGSSLKKIKTPPPAYELVLPPPLPNKNCLSITCSDPLTYTPPGSPCGCVWPLQVKLSINVPIYNFFPLFSKLAEEIAASVLLNHSQVRIVGADAASQQLEKTTVLINLVPKGVKFDDTMSFLMYKKFWNKEILIDASVFGAYEVLYVHYPGLPPSPPSAPSDASSIDDGPNPGYDNSGTAIKPLGVDVSKNKKEGSNGRMIVIIVLSSVTAFVVFISLAWLCLLKYHSCANERKEIPDGLIRSYSKQSKTARSITHGITPGSGSQSFNSGTITYTGSAKIFTLNDLEKATNNFDSSRILGEGGFGLVYKGILNDGRDVAVKILKREDRRGGREFLAEVEMLSRLHHRNLVKLIGICIEKQTRCLVYELVPNGSVESHLHGKAKTQFINIFGSQKVTIAFQRLPFEYSIFTGADKETDSLDWNARMKIALGAARGLAYLHEDSNPCVIHRDFKASNILLECDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDFSQPPGQENLVTWVRPLLTSKEGLQMIIDPFVKPNISVDTVVKVAAIASMCVQPEVSQRPFMGEVVQALKLVCSEFEETDYVRSRSFQEEGILTGMKGKLSEVSGERVEFSKYQNTLSGYQSGKENVALSASELLRTSGQEFDSFRRYSTSGPLTTGKKRQFWQKLRSLSRGSTSEHGFSTKLWPGSH* 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0996 874 MobiDBLite consensus disorder prediction 314 338 - -
Apr10g0996 874 Pfam Protein tyrosine and serine/threonine kinase 454 755 IPR001245 GO:0004672|GO:0006468
Apr10g0996 874 MobiDBLite consensus disorder prediction 107 135 - -
Apr10g0996 874 ProSiteProfiles Protein kinase domain profile. 451 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0996 874 Gene3D Transferase(Phosphotransferase) domain 1 565 776 - -
Apr10g0996 874 PANTHER OS01G0750732 PROTEIN 7 541 - -
Apr10g0996 874 PANTHER OS01G0750732 PROTEIN 567 873 - -
Apr10g0996 874 MobiDBLite consensus disorder prediction 42 69 - -
Apr10g0996 874 CDD STKc_IRAK 457 756 - -
Apr10g0996 874 SUPERFAMILY Protein kinase-like (PK-like) 430 755 IPR011009 -
Apr10g0996 874 MobiDBLite consensus disorder prediction 41 142 - -
Apr10g0996 874 ProSitePatterns Serine/Threonine protein kinases active-site signature. 604 616 IPR008271 GO:0004672|GO:0006468
Apr10g0996 874 Gene3D Phosphorylase Kinase; domain 1 424 526 - -
Apr10g0996 874 PANTHER OS01G0750732 PROTEIN 567 873 - -
Apr10g0996 874 PANTHER OS01G0750732 PROTEIN 7 541 - -
Apr10g0996 874 ProSitePatterns Protein kinases ATP-binding region signature. 457 479 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0996 Apr-Chr10 22424982 22431805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0996 183 869 Receptor kinase-like Gene Family AT5G56890 55.988 0.0 730
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Apr10g0996 PK_Tyr_Ser-Thr 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0996 - - gmx:100814040 1319.29