Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0988 ATGGACAATATTTGGATTGTGTTTGTGACAGTATTTCTCTTATGCACTGTGATACTCTATAGGAACAGGCTTAGCCTTATGCTCAAATCAAAACATAGAAACAAGCTTCCATTAGGCACTCTTGGATGGCCATTTATAGGTGAAACCATTGAGTTTGTTTCATGTGCTTACTCTGATCGCCCCGAGAGCTTCATGGACAAGCGACGCAGCACGTATGGCAAGGTGTTTAAGTCACACATATTTGGAAGCCCTACAATTGTGTCCACGGATGCAGATGTGAATAAATTCATACTGCAAAGTGATGCAAAGGTTTTTGTTCCTTCTTATCCTAAGTCTCTTACTGAGTTGATGGGAGAGTCTTCTATTTTGCTCATCAATGGAAGCCTTCAGAGGAAAATACATGGACTCATTGGAGCTTTCTTCAAGTCTCAACAGCTAAAGGCTCAGATTACCAGAGATATGGAGAAATATGTCAAAGAATCAATGGCAAGCTGGAGGGAGGACTACCCCATATACATACAAGATGAAACAAAAAAGATTGCTTTTCATGTACTAGTCAAGGCATTGATTAGTTTGGATCCGGGTGAAGAAATGGAGCTTCTAAAGAAACATTTTCAGGAATTCATCTCTGGCCTCATGTCTTTACCTATAAACCTACCAGGAACTAAACTTTATCATTCCTTACAGGCAAAAAAGAAAATGGTGAAATTAGTGAGAAGAATTATCCTTGCTAAAAGAAATAGTGGCATCTCCACAGTTCCAAAAGATGTGGTGGATGTGCTTCTCCATGATGCAAGTGAAAAATTGACTGATGATTTAATAGCTGATAATATTATTGATATGATGATTCCAGGGGAGGACTCAGTGCCAGTTCTTATGACTCTAGCTACAAAGTATTTATCAGAATGTCCTCAAGCTTTGCAACAATTGACTGAGGAAAATATGGAGCTTAAGAAACTTAAAGATCAGGTTGGGGAGCCCTTGTGTTGGAGTGATTATTTATCATTGCCATTTACTCAAACAGTCATCACTGAAACTTTGAGAATGGGAAATGTTATTATTGGTGTCATGAGAAAGGCCATAAAAGATGTAGAAATAAAAGGCTACTTAATACCAAGAGGGTGGTGTGTGTTTGCAAATTTTAGATCAGTTCATCTAGATGACAAAAACTATGAGTGGCCATATCAATTCAATCCATGGAGGTGGCAAGACAAAGACATGAGCAATTGCAATTTCACTCCTTTTGGAGGGGGACAAAGGTTGTGCCCGGGCCTTGACTTGGCCAGGCTGGAAGCTTCCATCTTCCTACACCACTTTGTCACTCAATTCAAATGGCATGCCGAAGAAGATACAATAGTGAACTTCCCTACTGTAAGAATGAAAAGGAGGATGCCTGTGTTGGTAAGGAGAGTGGAATCTTAA 1422 0.3959 MDNIWIVFVTVFLLCTVILYRNRLSLMLKSKHRNKLPLGTLGWPFIGETIEFVSCAYSDRPESFMDKRRSTYGKVFKSHIFGSPTIVSTDADVNKFILQSDAKVFVPSYPKSLTELMGESSILLINGSLQRKIHGLIGAFFKSQQLKAQITRDMEKYVKESMASWREDYPIYIQDETKKIAFHVLVKALISLDPGEEMELLKKHFQEFISGLMSLPINLPGTKLYHSLQAKKKMVKLVRRIILAKRNSGISTVPKDVVDVLLHDASEKLTDDLIADNIIDMMIPGEDSVPVLMTLATKYLSECPQALQQLTEENMELKKLKDQVGEPLCWSDYLSLPFTQTVITETLRMGNVIIGVMRKAIKDVEIKGYLIPRGWCVFANFRSVHLDDKNYEWPYQFNPWRWQDKDMSNCNFTPFGGGQRLCPGLDLARLEASIFLHHFVTQFKWHAEEDTIVNFPTVRMKRRMPVLVRRVES* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0988 473 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Apr10g0988 473 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0988 473 PRINTS E-class P450 group I signature 340 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0988 473 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0988 473 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0988 473 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0988 473 Coils Coil 303 323 - -
Apr10g0988 473 PANTHER CYTOCHROME P450 26 15 466 - -
Apr10g0988 473 Pfam Cytochrome P450 37 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0988 473 Gene3D Cytochrome P450 27 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0988 473 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 15 466 - -
Apr10g0988 473 SUPERFAMILY Cytochrome P450 31 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0988 Apr-Chr10 22350330 22354558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0988 32 444 Cytochrome P450 AT3G13730 68.660 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0988 K12638 - gmx:100797868 884.019