Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0986 ATGGAGGAAACGCCTAAGCTCCTCCATGGAACAATTGAAGCTACCATCTTTCATGCCTCACCTCACTCACCTTTATTTCCCTTCAATCGCTTTAAATTTTTTCAGTGCATATGTACAAATGGAAAGGCTGCTTATGTGACTATTAAGATAGACAACCACAAGGTTGCAAAAACCAGCCAAGAAAGCAACCGTGTATGGAACCAAACCTTTCAGATTCAGTGTGCTCATCCAGCTGATTCATCTATCACCATTACACTGAAAACATCATGTTCTTCCATATTGGGAAAATTCCACATCCAAGCTCAGCAGCTATTGAAGAAAGGAGGCTTGATTAATGGACTCTTCCCTCTCCTCATTGAAAATGGAAAGCCAAACTCAAAACTAAAGTTAAAGTTTCTATTATGGTTCAAGCCAGCAGAATTGGAACTAAGTTGGTCAAAGGTGTTAAGCAATGGTCAATTTCAAGGGCTGAGGGATGTTACATTCCCACAAAGGTCCAATTGTCATGTTAAACTTTATCATGATGCTCACCATTCTTCTGCTTTCCTACCTCCCTTTGATCTATTTGGAGCTCCAAAAAAGCTATGGGAGGATGTCTATAAAGCCATTGAGGGTGCAAAGTATATAGTTTATATTGCAGGCTGGTCCTTTAATCCCAAGATGGTTCTGGTTAGAGATCCTCACACAGAAATCCCACATGCCAGAGGAATAAAGTTGGGTGACCTATTGAAGAAGAAGGCAGAGGAAGGAGTGGCTGTGAGGGTTATGCTATGGGATGATGAAACGTCTTTGCCCTTTATTAAGAACAAAGGTGAAATGAACACACATGATGAGGAGGCTTTTGCTTATTTTAACCACACAAAAGTAATATGCAGGAAGTGTCCAAGATTACACCCTAAGTTTCCCACACTCTTTGCTCACCATCAAAAGACTATAACAGTGGACACAAAAGCACTCACATCCGTTGGTGACAGAGAACTTATGAGCTTTGTTGGAGGGTTAGATTTGTATGATGGAAGATATGACACGGAACAACATTCATTGTTTCAAACACTCATTAGGGAATCTCATTGTTATGATTTCTACCAAACTAACATTGAACGAGCTAGCCTAAACAAAGGAGGGCCAAGAATGCCTTGGCATGATGCTCATGCTTGTGTTACTGGTGAAGCTGCTTGGGATGTGCTAACCAATTTTGAGCAAAGATGGACAAAGCAGTGTGATCCTTCTTTTCTAGTTCCTTCAAGCACCTTAGAAAATCTTATGCCCCGGGAAAGCACAAGCACTCTTAGAGAGAGGAATTGGAAAGTTCAAGTATATAGGTCAATTGACCACGTTTCAGTTGGTGAGTTGTTTACAAAGTTAACTGTGGAGAGGAGCATTCATGAAGCTTATGTTGAAGCAATTAGGAGAGCTGAAAGGTTTATTTACATTGAAAACCAATACTTCATTGGGGGGTGCCACTGGTGGAAGAAGGATAGGCATTGTGGTTGCAATAATCTAGTTCCTATTGAAATTGCACTCAAGGTGGTAAGTAAGATTAAAGCAAAGGAGAGGTTTGCTGTGTACATAGTCATACCAATGTGGCCAGAAGGAGAGCCTGAAAGTGAACCTGTTCAAGATATACTGCATTGGACTAGAGAAACAATATCAATGATGTATAGGTTGATTGGAGAAGCAATAGAAGAAAGTGGAGAACCAGAACACCCAAGAGATTACTTGAATTTCTTTTGCCTTGCAAATAGGGAGCAGAAGGGACCAGGGGAGTATCTTCCACCAGATTCCCCCCATCCTGAAACTCAATATTGGAATGCACAAAAGAATAGGAGATTCATGGTTTATGTTCACTCCAAGCTCATGATAGTGGACGACCTATACATATTAATTGGATCAGCAAATATGAACCAAAGATCCATGGACGGGCAAAGAGACACTGAGATTGCCATAGGATGCTACCAATATGAAGATGTAGCTGATAACCAAATGAACCTTGGTGATATTCATGCATATAGAATGTCTCTATGGTATGAGCACACTGTTAGTGATGATGAATTGTTCTTAGAGCCAGAAAGTTTGGAGTGTGTGAAGAGAATGTGCTCAATAGGAGATCAAATGTGGGAAATCTATAGCAATGAAGAAATTGTGGACATGGAAGGCGTGCACCTTGTAACATACCCTATGAGAGTAACACAAGAAGGGTATGTGAAGGACTCGAGTGATGGAGTTCATTTTCCTGATACAAATTCTCTAGTGAAAGGAAAGAGGTCTAAAATATTGCCTCCTATCTTTACCACATAG 2298 0.4056 MEETPKLLHGTIEATIFHASPHSPLFPFNRFKFFQCICTNGKAAYVTIKIDNHKVAKTSQESNRVWNQTFQIQCAHPADSSITITLKTSCSSILGKFHIQAQQLLKKGGLINGLFPLLIENGKPNSKLKLKFLLWFKPAELELSWSKVLSNGQFQGLRDVTFPQRSNCHVKLYHDAHHSSAFLPPFDLFGAPKKLWEDVYKAIEGAKYIVYIAGWSFNPKMVLVRDPHTEIPHARGIKLGDLLKKKAEEGVAVRVMLWDDETSLPFIKNKGEMNTHDEEAFAYFNHTKVICRKCPRLHPKFPTLFAHHQKTITVDTKALTSVGDRELMSFVGGLDLYDGRYDTEQHSLFQTLIRESHCYDFYQTNIERASLNKGGPRMPWHDAHACVTGEAAWDVLTNFEQRWTKQCDPSFLVPSSTLENLMPRESTSTLRERNWKVQVYRSIDHVSVGELFTKLTVERSIHEAYVEAIRRAERFIYIENQYFIGGCHWWKKDRHCGCNNLVPIEIALKVVSKIKAKERFAVYIVIPMWPEGEPESEPVQDILHWTRETISMMYRLIGEAIEESGEPEHPRDYLNFFCLANREQKGPGEYLPPDSPHPETQYWNAQKNRRFMVYVHSKLMIVDDLYILIGSANMNQRSMDGQRDTEIAIGCYQYEDVADNQMNLGDIHAYRMSLWYEHTVSDDELFLEPESLECVKRMCSIGDQMWEIYSNEEIVDMEGVHLVTYPMRVTQEGYVKDSSDGVHFPDTNSLVKGKRSKILPPIFTT* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0986 765 PANTHER PHOSPHOLIPASE D 4 765 IPR015679 -
Apr10g0986 765 PANTHER PHOSPHOLIPASE D ALPHA 4 765 - -
Apr10g0986 765 SUPERFAMILY Phospholipase D/nuclease 149 412 - -
Apr10g0986 765 Pfam Phospholipase D C terminal 683 754 IPR024632 -
Apr10g0986 765 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 611 638 IPR001736 GO:0003824
Apr10g0986 765 PIRSF PLD_plant 1 765 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Apr10g0986 765 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 303 340 IPR001736 GO:0003824
Apr10g0986 765 SUPERFAMILY Phospholipase D/nuclease 434 695 - -
Apr10g0986 765 Pfam C2 domain 44 117 IPR000008 -
Apr10g0986 765 SMART pld_4 303 340 IPR001736 GO:0003824
Apr10g0986 765 SMART pld_4 611 638 IPR001736 GO:0003824
Apr10g0986 765 Gene3D Endonuclease Chain A 185 434 - -
Apr10g0986 765 CDD PLDc_pPLD_like_2 455 653 - -
Apr10g0986 765 Pfam Phospholipase D Active site motif 614 638 IPR001736 GO:0003824
Apr10g0986 765 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 133 IPR035892 -
Apr10g0986 765 Gene3D C2 domain 38 137 IPR035892 -
Apr10g0986 765 Gene3D Endonuclease Chain A 451 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0986 Apr-Chr10 22338483 22342407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0986 35 765 Phospholipase D Gene Family (Wang group) AT1G55180 63.526 0.0 970
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0986 K01115 - gmx:100789235 1388.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0986 10 22338483 22342407 Apr10g0986 10 22338483 22342407 ECH