Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0983 ATGGCTTCGAGCTCCTCCGGTGTGGAAATGGAAGTGGAAGAAGCATCAGTGGAGGATCTTCTGAATTCAACGACGGACGTTGAGCTTCTGAAGCAAGCTTGGCGTAACGAAAAAGCAGCACCGGAAATCCTTCAATTCCAATCGAATTTGATCTCCCGCGTAAGAGAACAGATTCAACTCATGGAAGACACTGTGGAGGAGAAATCCACTGACGGCACTGATCCTCTTTCGTTGTCTCTGTATCAGATGGACTTGGACAGAACCCTCTTTCTGTTAAGATCTTATCTTCGGATCCGCATTCAGAAGATTGAAAAGTACATGTTCCACATCCTAAAAACTGAAGAACTTTGGAACAGGCTATCTAAAGATGAGAAAAGTTTCACTAGAAGGTGTACAGATGACCTAAAACAACATTTGGAGGAAAGTGTTCTATCAAAATTGCCTGAAAATTATCAGTCTGTTCTGAAGCAATCTGTAATTAGTGAAGAAGATGACATGGTCGCAGAACCACACCTAGACACATTTGTTTTATGTAGAAGTAGAGAGTATCTCACAGGCATTCAACTTGAAGATGGGCCTGTTGATGACAGGTCGAAGCTGTTTGAGATGGAACCGGGCGTCCTCCACTTCATATGTTACAAATCAATAAAGGCACTTGTTGAGAGTGGCAAAATTGATCTCCTCTGA 687 0.4265 MASSSSGVEMEVEEASVEDLLNSTTDVELLKQAWRNEKAAPEILQFQSNLISRVREQIQLMEDTVEEKSTDGTDPLSLSLYQMDLDRTLFLLRSYLRIRIQKIEKYMFHILKTEELWNRLSKDEKSFTRRCTDDLKQHLEESVLSKLPENYQSVLKQSVISEEDDMVAEPHLDTFVLCRSREYLTGIQLEDGPVDDRSKLFEMEPGVLHFICYKSIKALVESGKIDLL* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0983 228 PANTHER SLD5 PROTEIN 11 228 IPR008591 GO:0006261
Apr10g0983 228 Coils Coil 51 71 - -
Apr10g0983 228 PIRSF GINS_Sld5 1 228 IPR008591 GO:0006261
Apr10g0983 228 Pfam DNA replication complex GINS protein SLD5 C-terminus 170 228 IPR031633 -
Apr10g0983 228 Gene3D - 12 218 - -
Apr10g0983 228 SUPERFAMILY GINS helical bundle-like 22 155 IPR036224 -
Apr10g0983 228 SUPERFAMILY PriA/YqbF domain 172 228 - -
Apr10g0983 228 CDD GINS_A_Sld5 26 144 IPR038749 -
Apr10g0983 228 Pfam GINS complex protein 54 125 IPR021151 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0983 21 175 Core DNA Replication Machinery Family AT5G49010 64.516 1.06e-66 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0983 K10735 - gmx:100784291 341.273