Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0982 ATGAGTCAAGAGCAACAGAAGCGGGGGAAGCAAGAGAAAGGTTCTGATGGTGCTGAGAAGGTCATTGTTGCCGTTAAGGCATCAAAGGAGATTCCAAAGACTGCTCTTGTTTGGTCTCTCACTCATGTTGTTCAACCTGGAGACTGCATTACACTGCTAGTGGTTGTGCCTTCACAAAGTTCAGGCAGAAGATTATGGGGTTTTCCGAGATTTGCTGGTGACTGTGCCAGTGGTATTAAGAAGTGCCCTCCAGGAACAATTTCAGAGCAGAAGAGTGATATCACTGATTCTTGCTCTCAGATGATCCTTCAGCTCCATGATGTCTATGATCCAAATAAGATAAACGTCAGGATTAAAATTGTTTCTGGATCACCTTGTGGAGCAGTGGCTGCAGAAGCCAAGAAAGCACAAGCCAATTGGGTTGTATTGGACAAGCAGCTCAAACATGAAGAAAAGCGATGCATGGAAGAGCTGCAGTGTAACATTGTGGTTATGAAGCGGTCTCAACCAAAAGTGCTTCGTTTGAATTTGATTGGTCCACAAAAGAAAGACGTAGAAGAAGCAGGTTTATCACCTTCTGAGCAAGATGATATGCGAACCAAAAAGAAGATTGATTCTTTAAATTCCATAAAAGGACCAACAGTAACTCCAACAAGCAGCCCTGAGCTAGGGACACCCTTCACTGCAACTGAAGCTGGCGCTTCATCGGTTTCAAGCTCTGATCCAGGAACCTCACCATTCTTTATCTTAGAGATGAATGGTGAGTCCAAGAAAGAGGAAACTATCAAGGAAAGTCAAGAACTTGGTTCTGACTCTGAAAGTGAAAGTCTGTCCACCTCATCTGCAAGCTTGAGATACCAGCCATGGATCACAGAATTGCTTTTACATCAACAGCCATCGCAACACAATGAAGAAAGATCAGAGATATCTCATGGTATGCCTCAAGCATCTTCAACAAGAGCTTTCCTGGAAAAGTATTCTAGGCTTGATAGAGGAGCTGGATTTGAAATCTCAGCCTATAGAAATGACTTGGATTTCAGTGGAAATTTAAGAGAAGCAATAGCATTATCTGGAAATGCCCCAGCTGGCCCCCCTCCATTGTGTTCAATATGTCAGCACAAAGCACCTGTTTTTGGAAAACCTCCTAGGTGGTTCAGCTATGCGGAGTTAGAACTTGCTACTGGTGGGTTTTCACAAGCCAACTTCTTGGCAGAAGGAGGATTTGGATCAGTTCACAGAGGGGTTCTACCTGAAGGACAAGTCATTGCTGTCAAGCAACACAAATTGGCTAGTTCTCAAGGTGATCTTGAATTTTGCTCAGAGGTGGAAGTCCTGAGCTGTGCTCAGCACAGAAATGTTGTTATGCTCATTGGGTTCTGTATAGAGGATAAGAGAAGGCTACTAGTTTATGAGTACATATGCAATGGATCATTGGATTCACATTTATATGGGCGACAAAGGGATCCATTAGAATGGTCTGCACGGCAAAAAATTGCTGTTGGTGCTGCTCGTGGGTTACGATATCTTCATGAAGAGTGCAGAGTGGGTTGTATTATCCACCGTGACATGAGGCCAAACAACATTCTCATAACTCATGATTTTGAACCTCTGGTTGGTGATTTTGGACTGGCAAGGTGGCAACCTGATGGAGACACGGGTGTGGAAACCAGAGTAATTGGAACATTTGGGTATTTGGCTCCTGAATATGCTCAAAGTGGCCAAATCACTGAAAAAGCTGATGTTTATTCCTTTGGGGTGGTATTGGTGGAGCTTGTTACAGGGAGGAAAGCTGTGGATCTCACCCGGCCTAAGGGACAACAGTGCCTTACTGAATGGGCACGACCACTGTTGGAAGAATATGCCATCGAGGAATTGATTGATCCGAGGCTTGGTAACCACTATTTAGAACAGGAGGTCTATTGCATGCTGCATGCTGCATCATTATGCATACGGCGAGATCCTCATTCTAGACCACGCATGTCACAGGTTCTCCGAATACTGGAGGGTGACATGGTGATGGACACAAATTACATTTCAACTCCAGGTTATGATGTGGGAAACCGAAGTGGTCGAATCTGGTCAGAGCCATTGCAAAGGCAACACCACTATAGTGGTCCCTTGTTAGAAGAGTCTCTGGAGTCATTCAGTGGGAAGCTATCCCTTGAAAAGCACAAGCCTTCCTATTGGGATAGGGACAAGCCTAAGAGGGCTTCATGTGAAGATGACGTTTGA 2232 0.4462 MSQEQQKRGKQEKGSDGAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLLVVVPSQSSGRRLWGFPRFAGDCASGIKKCPPGTISEQKSDITDSCSQMILQLHDVYDPNKINVRIKIVSGSPCGAVAAEAKKAQANWVVLDKQLKHEEKRCMEELQCNIVVMKRSQPKVLRLNLIGPQKKDVEEAGLSPSEQDDMRTKKKIDSLNSIKGPTVTPTSSPELGTPFTATEAGASSVSSSDPGTSPFFILEMNGESKKEETIKESQELGSDSESESLSTSSASLRYQPWITELLLHQQPSQHNEERSEISHGMPQASSTRAFLEKYSRLDRGAGFEISAYRNDLDFSGNLREAIALSGNAPAGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPEGQVIAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQRDPLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLTRPKGQQCLTEWARPLLEEYAIEELIDPRLGNHYLEQEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGDMVMDTNYISTPGYDVGNRSGRIWSEPLQRQHHYSGPLLEESLESFSGKLSLEKHKPSYWDRDKPKRASCEDDV* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0982 743 MobiDBLite consensus disorder prediction 184 280 - -
Apr10g0982 743 Gene3D Phosphorylase Kinase; domain 1 369 472 - -
Apr10g0982 743 CDD STKc_IRAK 403 669 - -
Apr10g0982 743 PANTHER OS01G0253100 PROTEIN 16 702 IPR045271 GO:0004714|GO:0006468
Apr10g0982 743 MobiDBLite consensus disorder prediction 187 206 - -
Apr10g0982 743 ProSiteProfiles Protein kinase domain profile. 397 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0982 743 MobiDBLite consensus disorder prediction 253 270 - -
Apr10g0982 743 CDD USP_Like 20 143 - -
Apr10g0982 743 Gene3D Transferase(Phosphotransferase) domain 1 473 679 - -
Apr10g0982 743 MobiDBLite consensus disorder prediction 207 246 - -
Apr10g0982 743 ProSitePatterns Tyrosine protein kinases specific active-site signature. 518 530 IPR008266 GO:0004672|GO:0006468
Apr10g0982 743 Pfam Protein tyrosine and serine/threonine kinase 401 666 IPR001245 GO:0004672|GO:0006468
Apr10g0982 743 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 16 702 - -
Apr10g0982 743 SUPERFAMILY Protein kinase-like (PK-like) 381 676 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0982 Apr-Chr10 22315601 22321471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0982 377 686 Trihelix Transcription Factor Family AT1G70460 51.875 3.85e-102 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Apr10g0982 PK_Tyr_Ser-Thr 4.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0982 - - gmx:100816340 1366.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0982 10 22315601 22321471 Apr10g0982 10 22315601 22321471 ECH