Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0981 ATGGCTTACTTTTGGAGCTCACTGGGTGGACTTTCATGGATTTGTGAAGGGAAATTTACTTTGGCTTCTTTCTGCATTCAAAGAAGCATAATTGATGGAATAAATCTGTTGTTCATGTGTGTTTTCTACCTACTTATGCTGATAGGCTTAGGTAGAAAACACCATGCAAGTGGTATCAGCAGAAAGGATCGTGTTTTGGTGGTAGCATCAATCTGCTGTTTTATTACTAGCATGATGTACTTTATCAATCTTTTGTATAATTTCATTGATCAAAATGAAAAATCAGATTATTTAAGTTGGGTTGCAAGTACTATTAAGGGACTAGTTTGGACCTCTCTTGCAGTTTCTTTGCTCACTCAAAGGAGCAAAAGTATCATATGTCTAAACACTGTTTGGTGGGTGTGCCTATGTGCATTGCTTTCTGCTATGAATATTGAAATTCTTCTGAGAGTACACACTATTCCTGTGTTTAATTTGTTGCCTTGGCTTGTAAGCTTCCTTCTTCTCTTTTGTGCTTTAAGAAACCATGGTTACTTTATTTCAAAACAATCCCAGAGTAACACAATGTTTGAACCATTGTTGTGTGAAACTGAAAAGGTAGAAACAAGCCAGACAGGATTAAGCCAGGCCAATTGTTTTAGCAGATTCACATTTTCTTGGATTAATCCTTTACTCTCTTTGGGTTATAAAAAGCCATTAGCTCTTAAAGACATCCCTTCTCTACCTTGTGAAGACAAAGCTAATTTCTCTTTCCAAAAGTTTGCTCACACATGGGATTCCTTCTTAAGTGAGAATGGTTCAAACAGTCCCAAGAATCAGGTTATCTGGACCATGTTAAGAGTCTTTACGAAAGAGAATATATGCATATCAATTAATGCATTAGCTAAGTCTATTTCTGCAGCTCTTTCACCTTTGATAGTATATGCCTTTGTAAACTATGCAAGTCGCAGTGAAGATAACTTGTGTGAGGGTCTTGCTATATTGGGGTGGCTGGTTCTTGCCAAATTGGTGGAGTCAGTGTGTGAGAGGCACTGGTACTTTGACTCAAGGAGATCAGGTATGAGAATGAGGTTAGCACTAATGGTGGCTGTGTATGATAAGCTGTTGAGGCTTTCAAGCTTGGGAAGGAGAAGGCACTCAACTGGGGAGATTGTGAATTACATAGCAGTTGATGCCTACAGGATGGGAGAATTTTTGTGGTGGTTCCACACTGGATGGAGCCTTACATTGCAAATTTTCTTATCCATTGTGGTGCTTTTTTGGGTTGTGGGACTTGGAGCTCTTCCAGCATTAGTTATTCTTCTCATATTTGCATTCTTCTTCAATCTTCCATATTCGAAGAAGATTAAAAATTGTCAGTCACAAATCCTGATTTCACAAGATCAGCGACTCAGGTCAACTTCAGAGATCCTGAATAGTATCAAAATTATTAAATTACAATCATGGGAGGATAAATTTATGAGCATGGTTGAGTCACTTCGTGATAGTGAGTTCAAATGGTTGGCTGAGACGCAGTTCACAAGGGCTTTTGGAACTGTAGTGTTTGTCCTTTCTCCAACAGTTATTTGCGCAGTAGTGTTATTAGGATGCACCCTCTTTAAGACTGCTCCACTAAATGCTGTAACTATATTCACAGTTCTTGCCGCATTGAGAACCATGGCTGAACCCGTTAGATTCATACCTGAGGCTATTTCTGTTGTTGCACAAGTTGGAGTTTCTTTGGATAGGCTTAACACTTTTCTCCTTGATGATGAACTCAAAACTCGTGAAAAAGGGAGCATTTCAATTTCAAAATCAGATAATTGCATTGAAATAGAGGCAGGTAATTTCAGTTGGGATGAAGAATTAGTGACCTTGACCTTGAGAGACATCAATTTAAGCATAAGTCGGGGACAAAAAGTAGCAGTTTGTGGACCAGTTGGAGCTGGAAAGTCTTCTTTATTGCATGCTATCCTTGGAGAGATGCCAAAAATTTCTGGAACTGTTAGTTTGAATGGAGCAGTAGCCTATGTTTCTCAAACTTCCTGGATTCAGAGTGGAACAATTCGGGACAACATACTCTTCGGAAAATCAATGGAAGAAAATAGATATGAGAATGCCATTAAAGCATGTGCCTTGGACAAGGATATAAATGGCTTCAGCCATGGTGATCTTACAGAAATAGGCCAGAGAGGGCTTAACTTGAGTGGAGGACAGAAGCAAAGAGTTCAACTTGCGCGTGCTGTCTATAATGATGCTGATTTATATCTTCTTGATGACCCTTTCAGTGCAGTAGATGCACATACTGCTTCAGTTCTATTCCATGACTGTGTCATGAGTGCTCTAAGAGAGAAAACAGTCATCCTAGTGACTCATCAAGTGGAGTTTCTGACAGAAGTTGATAAAATTCTGGTTATAGAGGGTGGGTGTATTTCTCAAGCAGGAAGCCATGAGGAGCTGTTAACATCTGGGGCAACCTTTGAGCAGCTTGTGAATGCTCATAGAGATGCAATAACTGTTCTGGATATACGTCAAAGCCTAGAAGAATGTCAAGAAGTAGATAGAGCCAATAATGAAAAACAGCATCATGTGTGTGAACCCAGTAAAAAAAACAATGATGGAGAAATATGTGAGACAAGTTTTGAAGGGCAACAACTTACTCAAGAAGAACAAAGAGAACTGGGAAGTGCTGGATGGAAACTATTCCTGGATTACGTTATAATCTCCAATGGGATGCTTCTTATGTGTTTGAGCTTCATAGCTCTGATAGGTTTTGCTGTTTTTCTGACTGCATCATCTTATTGGCTTGCCATAGCCAGTGAAATTTCAAGCATCTCCAGTATCATGCTGGTTGGAGTTTACACAGCAATGGCATTTTGTAGTGCTACCTTTGCTTATGTGAGGGCTGTTTTTATGGCTCATCTTGGATTAAAGGCTTCTAAAGCATTCTTCTCAGGTTTCACTTCTGCCATTTTCAATGCTCCCATGTCATTCTTTGACTCAACTCCTGTTGGGAGAATTTTAACCCGAGCATCATCAGATTTGGCTATTTTGGATTTTGATATACCTTTCGCCATAATCTTTACAGTACAAAGTGGGATTGAGCTTATAACAGGAATTGGGATTATTTCTTCAATCACATGGGAAGTTCTTATAGTAGCCATTCTAGTTGCAGTAGTAGGAAACTACATTAAGGTCTACTATGAAACCTCTGCAAGGGAATTAGTAAGAATTAATGGAACAACAAAAGCTCCAGTTGTGAATTATGCCACAGAGACATCAGCAGGAGTGGTCACAATAAGAGCTTTCAATATGGTGGACAGATTCTTCCAAACATTCCTACGTCTAGTTGACACAGATGCTGCACTTTTCTTGCATACTAATGCTGCTTTGGAATGGTTACTAGCAAGAACTGAAATACTCCAAAATTTGATCTTTTTCACTGCAGCTTCTCTATTTGTCTTTCTTCCCAAGGGATCAATAGCTCCAGGTCTTGTGGGACTTTCTCTGTCTTATTCTTTGTCATTGACAAAAACCCTGCTGTATTATACTAAGTGGTCTTGTAACTTGTCAAATTTCATCATCTCTGTTGAACGAATCAAACAATTCATGCAGATACCACAAGAGCCTCTAAAAATAATGGAAGATAAAAGGCCACCACCTTCATGGCCTTCCAAAGGCAGGATAGAATTTCAAGCTTTGAAGGTTAGATATCGTCCAAATACTCCATTTGTTCTGGATGGAATCACATGTACTTTCAAAGAAGGGACTAGAGTAGGGGTTGTAGGAAGAACAGGGAGTGGAAAAACAACTCTTTTAAGTGCATTGTTTCGTTTGGTAGAGCCTACAAGTGGTACAATTCTAATTGATGGGCTTAACATATGCTCAATAGGCCTGAAGGATTTAAGAATGAAGCTTAGCATCATCCCTCAGGAACCAATCCTTTTCAGGGGTAGTATTCGAACCAACTTGGACCCACTGGACCAATTCTCTGATGATGAAATATGGAAGGTTTTAGAGATGTGTCAACTCAAGGAGGCTATAACTGGACTACCATATCTACTGGACTCATCAGTGAGTAGTGAAGGCGAAAATTGGAGCATGGGACAACGCCAATTATTTTGCCTTGGAAGAGTCCTTCTGAAAAGGAACAGAATTCTTGTTCTGGATGAAGCAACAGCTTCCATTGATTCTGCCACAGATGCTATTTTACAAAGAATCATCAGACAGGAATTCTCTGAATGCACTGTTATTACTGTGGCTCATAGAGTTCCAACTGTAATAGACAGTGACATGGTCACGGTTCTTTCCTATGGAAAATTGGTGGAGTATGATGAACCTTCAAAACTTATGGAGTCCAATTCTTCATTCTCCAAGCTTGTAGCTGAATATTGGTCTAGCTGCAGGAGGAAATCTTTGTAA 4401 0.3945 MAYFWSSLGGLSWICEGKFTLASFCIQRSIIDGINLLFMCVFYLLMLIGLGRKHHASGISRKDRVLVVASICCFITSMMYFINLLYNFIDQNEKSDYLSWVASTIKGLVWTSLAVSLLTQRSKSIICLNTVWWVCLCALLSAMNIEILLRVHTIPVFNLLPWLVSFLLLFCALRNHGYFISKQSQSNTMFEPLLCETEKVETSQTGLSQANCFSRFTFSWINPLLSLGYKKPLALKDIPSLPCEDKANFSFQKFAHTWDSFLSENGSNSPKNQVIWTMLRVFTKENICISINALAKSISAALSPLIVYAFVNYASRSEDNLCEGLAILGWLVLAKLVESVCERHWYFDSRRSGMRMRLALMVAVYDKLLRLSSLGRRRHSTGEIVNYIAVDAYRMGEFLWWFHTGWSLTLQIFLSIVVLFWVVGLGALPALVILLIFAFFFNLPYSKKIKNCQSQILISQDQRLRSTSEILNSIKIIKLQSWEDKFMSMVESLRDSEFKWLAETQFTRAFGTVVFVLSPTVICAVVLLGCTLFKTAPLNAVTIFTVLAALRTMAEPVRFIPEAISVVAQVGVSLDRLNTFLLDDELKTREKGSISISKSDNCIEIEAGNFSWDEELVTLTLRDINLSISRGQKVAVCGPVGAGKSSLLHAILGEMPKISGTVSLNGAVAYVSQTSWIQSGTIRDNILFGKSMEENRYENAIKACALDKDINGFSHGDLTEIGQRGLNLSGGQKQRVQLARAVYNDADLYLLDDPFSAVDAHTASVLFHDCVMSALREKTVILVTHQVEFLTEVDKILVIEGGCISQAGSHEELLTSGATFEQLVNAHRDAITVLDIRQSLEECQEVDRANNEKQHHVCEPSKKNNDGEICETSFEGQQLTQEEQRELGSAGWKLFLDYVIISNGMLLMCLSFIALIGFAVFLTASSYWLAIASEISSISSIMLVGVYTAMAFCSATFAYVRAVFMAHLGLKASKAFFSGFTSAIFNAPMSFFDSTPVGRILTRASSDLAILDFDIPFAIIFTVQSGIELITGIGIISSITWEVLIVAILVAVVGNYIKVYYETSARELVRINGTTKAPVVNYATETSAGVVTIRAFNMVDRFFQTFLRLVDTDAALFLHTNAALEWLLARTEILQNLIFFTAASLFVFLPKGSIAPGLVGLSLSYSLSLTKTLLYYTKWSCNLSNFIISVERIKQFMQIPQEPLKIMEDKRPPPSWPSKGRIEFQALKVRYRPNTPFVLDGITCTFKEGTRVGVVGRTGSGKTTLLSALFRLVEPTSGTILIDGLNICSIGLKDLRMKLSIIPQEPILFRGSIRTNLDPLDQFSDDEIWKVLEMCQLKEAITGLPYLLDSSVSSEGENWSMGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRIIRQEFSECTVITVAHRVPTVIDSDMVTVLSYGKLVEYDEPSKLMESNSSFSKLVAEYWSSCRRKSL* 1467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0981 1466 CDD ABC_6TM_ABCC_D1 288 577 IPR044746 GO:0140359
Apr10g0981 1466 SUPERFAMILY ABC transporter transmembrane region 907 1202 IPR036640 GO:0005524|GO:0016021
Apr10g0981 1466 CDD ABC_6TM_ABCC_D2 905 1197 IPR044726 GO:0140359
Apr10g0981 1466 Gene3D ABC transporter type 1, transmembrane domain 271 586 IPR036640 GO:0005524|GO:0016021
Apr10g0981 1466 SUPERFAMILY ABC transporter transmembrane region 275 583 IPR036640 GO:0005524|GO:0016021
Apr10g0981 1466 Gene3D - 597 831 IPR027417 -
Apr10g0981 1466 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 293 569 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr10g0981 1466 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1222 1456 IPR003439 GO:0005524
Apr10g0981 1466 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 54 1463 - -
Apr10g0981 1466 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1212 1455 IPR027417 -
Apr10g0981 1466 Gene3D - 1205 1456 IPR027417 -
Apr10g0981 1466 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 54 1463 - -
Apr10g0981 1466 Pfam ABC transporter 621 755 IPR003439 GO:0005524
Apr10g0981 1466 Pfam ABC transporter 1239 1387 IPR003439 GO:0005524
Apr10g0981 1466 Gene3D ABC transporter type 1, transmembrane domain 872 1203 IPR036640 GO:0005524|GO:0016021
Apr10g0981 1466 CDD ABCC_MRP_domain1 603 802 - -
Apr10g0981 1466 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 596 826 IPR027417 -
Apr10g0981 1466 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 910 1170 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr10g0981 1466 Pfam ABC transporter transmembrane region 908 1170 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr10g0981 1466 Pfam ABC transporter transmembrane region 350 549 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr10g0981 1466 ProSitePatterns ABC transporters family signature. 728 742 IPR017871 GO:0005524
Apr10g0981 1466 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 605 826 IPR003439 GO:0005524
Apr10g0981 1466 CDD ABCC_MRP_domain2 1220 1440 - -
Apr10g0981 1466 SMART AAA_5 1248 1440 IPR003593 -
Apr10g0981 1466 SMART AAA_5 630 803 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0981 Apr-Chr10 22298367 22305106 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0981 580 832 Calmodulin-binding Proteins AT2G36910 27.536 1.48e-22 103
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0981 10 22298367 22305106 Apr10g0981 10 22298367 22305106 ECH