Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0980 ATGGCTTTCTTTGCGAGTGCAATAGGTGATTTCTCATGGATGTGTCTGAAGGATTTCGATTTCACTTCTTTCTGTTCTCAAAGGATCACATTAGACGGAATAAATCTACTTTTTGTCTTTGTCTTCTACTTTTCCTTGCTTATCAGTTTTATCAGAAGAAATTCTACAAGTACTAGCCCCCTAAAAAGTTGGACTTTCATCCTTGTTTCTATCTGTTGTGCTATTATTAGCATTGCTTTTTACATTATTGGCTTGTGGAATCTCATAGCCAAAACTGATAACTCTAAGCAGCTGAGCTGGTTAGCTTGCATTATTAGAGGATTTGTTTGGACTTCTTTGGCACTTTCTTTGCTTTTTCAGAGGCACAAATGGATCAAAATTCTGAACTGTGTTTGGTGGGCATGTTCCTGTGTACTAGTTTCGGCTGTCAACTTTGAAATTCTGTTTCAAAAGCATGCAATCGAAGTTTTTGATACTGTACAATGGCTTGTGCACTTCCTTCTTGTCTTCTGTGCCTTACAAAATCTTGGTTACTTTGTCACTCAAAGTGTGCCAGAAAGTTTATCTGAGCCTCTGTTGGCCGATAAAGATGAACCTAAACAAACAGGACTGGCCCATGCTCCTTTTCTCAGCAAGTTAACTTTCTCTTGGGTTAACTCCTTACTTTGCATAGGTTACTCAAAGCCACTAGCTCTTGAAGATATTCCTTCTCTTCTTTGTGAAGATGAAGCTGATTCAGCCTATCAAAACTTCATGCATGCAATGGAACGCCTTGTAAGGGATAGGAGCAAGAACAGTAACAGAAACTTGGTTCTTTGGTCTGTTGTTACAACTCATTTAAAAGAGAACCTATTAATAGCCTTTTATGGATTACTCAGAACCATTGCATTTACTGCTTCTCCTTTAATACTCTATGCTTTTGTAAACTACTCAAATAGCACGGATACAAATATCAAAGAAGGTCTTTCCATAGTGGGTTTTCTTATTCTCTCCAAAGTGGTTGACTCTTTGTCACAAAGACATATGTTTTTTGATGCTAAAAGGTCAGGATTGAGAATGAGATCGGCTCTTATGGTGGCAGTGTATAAAAAACAGCTAAAGCTTTCCAACACAGCAAGGAGAAGGCACTCAACTGGTGAAATTGTGAATTACATTGCTGTTGATGCATATAGAATGGGAGAATTTCCATATTGGTTTCATATAACATGGATTTGTGCATTGCAGATTGCTCTGTCTATTGGTATCCTTTTTGGTGTTGTAGGTGTTGGTGCTCTTCCTGGTTTAGTCCCTCTTCTCATTTTTGGACTTCTCAATGTACCATTTGCCAAGATCCTACAAAATTGTCAGGCAGAGTTCATGATTGCACAGGATGAGCGTCTTAGATCAACTTCAGAAATTCTAAATAGCATGAAAATCATTAAGTTGCAGTCCTGGGGGGACAAATTCAAGAACTTAGTTGAGTCCCTACGTGCTAAAGAGTTCATATGGCTTTCTAAGGCACAGATCTTGAAAGCTACTGGCTCATTTCTTTATTGGATGTCTCCTACCATTGTTTCTGCTGTTGTATTCCTTGGATGTGCTCTTTTCAATAGTGCCCCTTTGAATGCTGGGACCATTTTCACAGTTCTTGCTACATTGAGGAACTTGGGAGAACCTGTTAGACTGATCCCAGAGGCTCTGTCTATTATGATCCAAGTTAAGGTTTCCTTTGATCGTCTCAATGCCATTTTGCTTGATGAAGAGCTAGATAGTGATCGTAATGGAAGACATATAAATCAAAATTCAGTTAATGCAGTGGAAATCCAAGCTGGCAACTTCATTTGGGATCATGAAACAATGTCACCAACTTTGACAGATGTTAATTTAGAAATCAAATGGGGACAGAAAATAGCAGTTTGCGGGCCAGTTGGAGCAGGAAAATCATCTCTTTTGTATGCAATACTTGGAGAGATTCCTAAGATTTCAGGAATTGTCAATGTAGGTGGCACCCTAGCTTATGTTTCTCAAACTTCTTGGATACAAAGTGGGACAGTTAGAGATAACATACTCTTTGGCAAGCCAATGGACAAAAGAAGATATGAGAATGCCATTAAAGTTTGTGCTTTAGATCAAGATATTAAAGATTTTAGCCATGGTGATCTTACAGAAATAGGTCAGCGAGGGATTAACATGAGTGGAGGACAAAAGCAAAGGATTCAACTAGCTCGAGCAGTCTACAATGATGCTCACATCTATCTCCTTGATGACCCTTTCAGTGCGGTTGATGCTCACACTGCTGCTATTCTGTTCAATGACTGTGTCATGTGTGCTCTAAGAGAGAAAACAGTTATTCTAGTGACTCATCAAGTGGAGTTTCTCTCAGAAGTTGATAAAATCCTGGTAATGGAGGGTGGAAAAGTTACTCAATCAGGTAACTATGAGAGTCTCCTGACAGCTGGAACAGCCTTTGAACAACTTGTGAGTGCCCATAAAGAAGCAATTAATGAGTTGGATCAAAATAATGAAAACAGAAGTGATTCAGAAAATGAGATTATGGTTCATGCAAAAGAGTCTCAAGGTTTATATCTCACTAAAAATCCAAGTGAAGGGGAGATTTCTACCAAGGGTCAACTTGGGATTCAGCTTACACAAGAAGAAGAAAAAGAGATTGGTGATGTTGGCTGGAAGCCATTCTGGGATTATATTTCATTTTCAAGGGGATCATTCATGTTGTGTTGGATCCTGTTGGCACAAGCTGCTTTTGTTGCTTTGCAGACTGCATCAACGCTTTGGCTTGCTTTAGCCATTGAAATTCCAAAATTAACTAGTGGCACGTTGGTTGGAGTTTACGCATTAATTTCATTTGGTAGTGCAGCCTTCGTATATCTAAGGTCTTACTTGAGTGCACTTCTTGGATTAAAGGCTTCTACAGCCTTCTTCACAGGTTTCACTACAGCTATCTTCAATGCTCCTATGTTGTTCTTTGACTCCACCCCTGTAGGAAGAATTTTAACCCGAGCTTCGTCAGATTTAAGTATTTTGGACCTTGATATACCTCATGCCATCACTTTTGTTGCGTCCGTAGCAGTTGAAACTCTGGTGACAATTGGTGTAATGGTTTCAGTAACATGGCAAGTTCTCATTGTTGCTATTCCTGCAATGGTTGCATCAAAATATGTTCAGGGATATTATCAAGCCTCAGCGAGGGAATTAATAAGGATCAATGGAACCACAAAGGCTCCAGTCATGAATTTTGCAGCTGAGACATCACTTGGAGTAGTTACAGTAAGAGCATTTAACATGTTAGAAAGATTTTTCAAAAATTACTTAAAGCTTGTGGACACAGATGCAACACTATTCTTTCATTCTAATGTGGCCATGGAATGGTTAGTTGTAAGAATTGAAGCACTTCAAAATTTGACAGTCATCACTGCAGCTTTGTTGCTTATTCTAATTCCTCAGGGATATGTGTCCCCAGGCATCGTGGGATTGTCTCTTTCTTATGCTTTCACCTTGACAGGATCCCAAATATTTTGGACTAGATGGTATTGCAACTTGTTAAACTATCTGATCTCTGTTGAAAGAATCACGCAATTCATTAACATACCTGCAGAGCCTCCTGCCATTGTGAACGATAACCGGCCTCCATCTTCATGGCCTTCCAAAGGAAGGATTGATCTTCAAGCCTTAGAGATTAGATACCGTCCAAATGCTCCATTAGTACTTAAGGGTATCACTTGTACATTTAAAGAAGGAAGTAGAGTAGGTGTTGTAGGAAGGACTGGAAGTGGAAAAAGTACACTTATAAGTGCTTTGTTTCGCTTAATTGAGCCTTCAAGAGGTGATATTCTTATAGATGGGATTAATATATGCTCAATGGGGTTGAAGGATTTGAGAATGAGACTAAGCATCATCCCTCAAGAGCCAACTCTTTTCAAGGGCAGCGTTAGAACCAACTTGGACCCTCTAGGCCTCTACTCAGATGATGATATATGGAAGGCTTTACAGAAATGTCAGCTTAAGGAAACTATCAGCTGTCTACCAAATCTCTTGGACTCCTCTGTGAGTGATGAAGGTGGAAATTGGAGCTTAGGACAACGCCAACTGTTTTGTCTTGGAAGAGTACTCCTCAAGAGGAACAGAATTCTTGTTCTGGATGAAGCTACTGCTTCCATTGACACTGCAACAGATGCCATTCTACAAAGAATAATTAGACAAGAATTTGCAGAATGCACAGTTATAACTGTGGCTCACAGGGTTCCAACAGTAATAGATAGTGACATGGTCATGGTCCTGTCTTATGGGAAACTGGTGGAATATGATGAGCCTTCAAAGTTAATGGACACCAATTCTTCATTCTCCAAGTTGGTAGCTGAATATTGGTCCAGTTGCAGGAAGAATTCATCCTCAAATATTAGCAAGCTGCAAGATTGA 4413 0.3954 MAFFASAIGDFSWMCLKDFDFTSFCSQRITLDGINLLFVFVFYFSLLISFIRRNSTSTSPLKSWTFILVSICCAIISIAFYIIGLWNLIAKTDNSKQLSWLACIIRGFVWTSLALSLLFQRHKWIKILNCVWWACSCVLVSAVNFEILFQKHAIEVFDTVQWLVHFLLVFCALQNLGYFVTQSVPESLSEPLLADKDEPKQTGLAHAPFLSKLTFSWVNSLLCIGYSKPLALEDIPSLLCEDEADSAYQNFMHAMERLVRDRSKNSNRNLVLWSVVTTHLKENLLIAFYGLLRTIAFTASPLILYAFVNYSNSTDTNIKEGLSIVGFLILSKVVDSLSQRHMFFDAKRSGLRMRSALMVAVYKKQLKLSNTARRRHSTGEIVNYIAVDAYRMGEFPYWFHITWICALQIALSIGILFGVVGVGALPGLVPLLIFGLLNVPFAKILQNCQAEFMIAQDERLRSTSEILNSMKIIKLQSWGDKFKNLVESLRAKEFIWLSKAQILKATGSFLYWMSPTIVSAVVFLGCALFNSAPLNAGTIFTVLATLRNLGEPVRLIPEALSIMIQVKVSFDRLNAILLDEELDSDRNGRHINQNSVNAVEIQAGNFIWDHETMSPTLTDVNLEIKWGQKIAVCGPVGAGKSSLLYAILGEIPKISGIVNVGGTLAYVSQTSWIQSGTVRDNILFGKPMDKRRYENAIKVCALDQDIKDFSHGDLTEIGQRGINMSGGQKQRIQLARAVYNDAHIYLLDDPFSAVDAHTAAILFNDCVMCALREKTVILVTHQVEFLSEVDKILVMEGGKVTQSGNYESLLTAGTAFEQLVSAHKEAINELDQNNENRSDSENEIMVHAKESQGLYLTKNPSEGEISTKGQLGIQLTQEEEKEIGDVGWKPFWDYISFSRGSFMLCWILLAQAAFVALQTASTLWLALAIEIPKLTSGTLVGVYALISFGSAAFVYLRSYLSALLGLKASTAFFTGFTTAIFNAPMLFFDSTPVGRILTRASSDLSILDLDIPHAITFVASVAVETLVTIGVMVSVTWQVLIVAIPAMVASKYVQGYYQASARELIRINGTTKAPVMNFAAETSLGVVTVRAFNMLERFFKNYLKLVDTDATLFFHSNVAMEWLVVRIEALQNLTVITAALLLILIPQGYVSPGIVGLSLSYAFTLTGSQIFWTRWYCNLLNYLISVERITQFINIPAEPPAIVNDNRPPSSWPSKGRIDLQALEIRYRPNAPLVLKGITCTFKEGSRVGVVGRTGSGKSTLISALFRLIEPSRGDILIDGINICSMGLKDLRMRLSIIPQEPTLFKGSVRTNLDPLGLYSDDDIWKALQKCQLKETISCLPNLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDTATDAILQRIIRQEFAECTVITVAHRVPTVIDSDMVMVLSYGKLVEYDEPSKLMDTNSSFSKLVAEYWSSCRKNSSSNISKLQD* 1471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0980 1470 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1220 1452 IPR003439 GO:0005524
Apr10g0980 1470 Gene3D - 1201 1452 IPR027417 -
Apr10g0980 1470 Gene3D - 606 852 IPR027417 -
Apr10g0980 1470 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 601 822 IPR003439 GO:0005524
Apr10g0980 1470 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 61 1462 - -
Apr10g0980 1470 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 284 565 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr10g0980 1470 SMART AAA_5 1244 1436 IPR003593 -
Apr10g0980 1470 SMART AAA_5 626 799 IPR003593 -
Apr10g0980 1470 Gene3D ABC transporter type 1, transmembrane domain 870 1199 IPR036640 GO:0005524|GO:0016021
Apr10g0980 1470 Gene3D ABC transporter type 1, transmembrane domain 260 581 IPR036640 GO:0005524|GO:0016021
Apr10g0980 1470 CDD ABCC_MRP_domain1 599 799 - -
Apr10g0980 1470 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 906 1168 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr10g0980 1470 CDD ABC_6TM_ABCC_D2 900 1193 IPR044726 GO:0140359
Apr10g0980 1470 ProSitePatterns ABC transporters family signature. 724 738 IPR017871 GO:0005524
Apr10g0980 1470 Coils Coil 823 843 - -
Apr10g0980 1470 SUPERFAMILY ABC transporter transmembrane region 889 1200 IPR036640 GO:0005524|GO:0016021
Apr10g0980 1470 Pfam ABC transporter 617 751 IPR003439 GO:0005524
Apr10g0980 1470 Pfam ABC transporter 1235 1383 IPR003439 GO:0005524
Apr10g0980 1470 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 61 1462 - -
Apr10g0980 1470 SUPERFAMILY ABC transporter transmembrane region 272 579 IPR036640 GO:0005524|GO:0016021
Apr10g0980 1470 CDD ABC_6TM_ABCC_D1 285 573 IPR044746 GO:0140359
Apr10g0980 1470 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1208 1451 IPR027417 -
Apr10g0980 1470 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 596 821 IPR027417 -
Apr10g0980 1470 CDD ABCC_MRP_domain2 1216 1436 - -
Apr10g0980 1470 Pfam ABC transporter transmembrane region 938 1168 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr10g0980 1470 Pfam ABC transporter transmembrane region 304 544 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0980 Apr-Chr10 22285911 22292123 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0980 577 844 Calmodulin-binding Proteins AT2G36910 25.862 3.75e-21 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0980 - - gmx:100784827 2385.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0980 10 22285911 22292123 Apr10g0980 10 22285911 22292123 ECH