Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0957 ATGGCGACACCGGGGATGGAGGGAGGAGCGGCGCAACCTCCGGGAACGGACATGACCGGAATATGCTTCCGAGACCAATTGTGGCTTAACACCTTCCCTTTGGATCGCAACTTAGTCTTCGATTACTTCGCGTTATCGCCTTTCTACGATTGGACTTGCAACAACGAGCAACTGCGTATGCGTTCTGTTCACCCTCTCGATCTCTCTCAGCTCACGAAAATGACGGGCACGGAGTACATGCTTAGTGAAGTTATGGAACCTCACCTCTTTGTTATTCGCAAGCAGAAGAGAGATAGCCCTGACAAAGTTACGCCTATGCTCGCTTATTACATATTGGATGGTTCCATTTACCAGGCTCCCCAGCTCTGCAATGTTTTTGCTGCTCGGATTGGAAGGGCCCTTTATTACATACAGAAGGCCTTTACTACAGCTGCCTCAAAGTTGGAGAAGATTGGATACGTTGATTCTGAAAATGAGACTGCACTGCCGGAATCAAAGACTGGTAAGGAGACAATTGACGTAAAGGAAGTTAAACGAGTGGATCATATTCTTGCATCCTTGCAACGCAAGTTACCACCAGCTCCTCCTCCGCCACCATTTCCAGAAGGGTATCTTCCACCTCCCACAGCAGAATCTGAGAAAGGTACTGAAACTCAGGAAGCGGCAGAATCGCAAGCTCCTCCTGTTGATCCCATAATTGATCAAGGACCAGCAAAAAGAATGAAATTTTGA 732 0.4781 MATPGMEGGAAQPPGTDMTGICFRDQLWLNTFPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYILDGSIYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENETALPESKTGKETIDVKEVKRVDHILASLQRKLPPAPPPPPFPEGYLPPPTAESEKGTETQEAAESQAPPVDPIIDQGPAKRMKF* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0957 243 MobiDBLite consensus disorder prediction 185 243 - -
Apr10g0957 243 Pfam MED6 mediator sub complex component 21 146 IPR007018 GO:0003712|GO:0006357|GO:0016592
Apr10g0957 243 Gene3D Mediator complex, subunit Med6 15 144 IPR038566 -
Apr10g0957 243 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 6 11 243 - -
Apr10g0957 243 PANTHER MED-6-RELATED 11 243 IPR007018 GO:0003712|GO:0006357|GO:0016592
Apr10g0957 243 MobiDBLite consensus disorder prediction 190 206 - -
Apr10g0957 243 PIRSF MED6_meta/plant 6 243 IPR016820 GO:0003712|GO:0006357|GO:0016592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED6 Apr10g0957 Med6 7.2e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0957 K15128 - gmx:100792248 436.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0957 10 22098280 22101291 Apr10g0957 10 22098280 22101291 ECH