Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0954 ATGGAAATAGGACCACAATGGATTGTCTCCTCAAAGTTAAACACATGGCTATGGTTTGTCTTGGTTCCAATTTTCATTACTCACGCCAACTCAAGACTAGGCAAACCTGTTGGAAGAGAAATTACCAACGATAACCATCCAGATTTCATAAGCATAGATTGTGGATCACACAGAGATTACTGGGATCAGGCAACTGGAATTTGGTATCAGACAGACGAAGGTTTTGTGGAAACAGGAACAAATCATATGATTTCATCAAGTGTGCACTTGAGCTATCGCTACTTTGGGGAACAATTGAATACACTGAGAAGCTTTCCAGAGGGAGACAGAAACTGCTACACCCTAAAACCTAAACAAGGCAAAAATAATAGCTATTTAATCAGAGCTTTCTTTGCATACGGAAATTATGACTCCAAAAATGAAACCCCATCTTTCGACTTGTACATTGGGGTCAATTACTGGCACACAATAAATGAGGACCAACATCATTTCATCTTTGCCGAGGTTATTCACACTCCCTCAAGTGACACTATACAATTGTGTCTTGTAAAGACTGGACCAACAATACCTTACATTTCTACATTGGTATTACGCCCTTTGAACAATTCCATTTATCAGACAATGTCAAGTACTACTTCACAACCGCTACTGGATCACCAGACAAGGATCGATGTTGGCTTCCATGGATGGCCTATTCACTCCAGGTACAAAGATGACGTCTATGATCGGTTGTGGCGACATGACCAATATAACGTTACAAATGGTTGGCATCCTTTGGACGAATCAATTGATGTGGATCCTTCAACCAGTGCATATAAATTGCCAAGCCAAGTATTAAGGACTGCATCCCAATCACCAAATGTCTCGTACCCCTTGAAATTTGACTATGACACTCTGTTTAAAGACCTGGATACAAATTATGAGTATCGTGTCTACTTTCACTTTGCTGAAATTGAGGCACTTCCACCGGGTCAAAATAGAATTATCAATATCACCCTTAATTCTAAACCCTTCCTCTCACACCCTTTGGTTCTTCAATACATGAAGCCAGTCACCATTAGTCCTCAAGATGCAGTCCGAGGTAGAATTTCATTTAGCATTAGTGCAACGCCAGAATCTGCTGCTCCTCCCATCCTTAACGCCTTTGAGGCCTACAAGTTGATACCCGGTCTTTATTCCCCAACAGACGCTCGAGATGCTGCTGCTATTATGGACATTAAAAGCGCCTACCATATCACTTGGCTGAATTGGCAAGGGGACCCGTGTCTTCCAAAGCAATTTGCATGGGAGGGTCTCACTTGCAACTCTGACACCAATCCCAGGATCACAGCTTTGAACTTGAGCTCAAGCAAATTGACAGGGGAGATAAATATTTCATTCTCATATCTTACAGAACTAGAAATCCTGGATTTGTCAAATAACTATTTAGAAGGACCTGTGCCAGAATTTCTGGCAGAATTACCCAAGTTAAAATTACTTAATCTCACAGGGAACAAGCTTTCAGGCCCAATTCCTAAGGCTCTCAAGAAAAAGGCCGATACAACTCTGCAATTGAGTTGTTCCAACACATTTGATTATGTGGACTCAAATACGCAAGAGGTCACCTACGGGGAGATTCTAAGTATCACCAATAACTTAGAGAGGGTGGTGGGTAAAGGAGGATATGGAACTGTCTACTATGGTTGCATAGGTGAAAGACAAGTAGCAGTGAAGATGCTTTCTCCTTCAACTCAAGGTTTTCAGCAATTTCAGACAGAGGCAAAAATTCTCACTAGAGTACATCAAAAGTGTTTGACTCCTCTAATTGGATATTGCAATGAAGCCTCGGCACTCATCTATAAATACATGCCCAATGGAAACTTGGCAGACCATCTTTCAGATAAAAATCAATTTTCCCTAGTTTGGAACCAGAGACTTCAAATTGCTCTGGACTCCGCAATAGGCTTGGAGTATCTTCATAAATGTTGTAAGCCTCCAATTGTACACAGAGATGTCAAGACTAGTAACATTTTACTCGATGAAAATTTCAATGCTAAAATATCTGATTTTGGATTGTCAAGGATCTTTTCAAATGAATGTGACACCCATGTGCTAACAAAAGTTGCAGGCACCCCAGGATACTTTGATCCTGAATACTACAAAACAAACAAGTTGACTGAAAAAAGTGATGTCTATAGTTTTGGAATTGTTCTGTTAGAGATAATCACGGGGCACCCTGCTATTTTCAAAAACCATGAGAACACACACATAGTTCAATGGGTGAATTCCATGTTAGAAGATGAAGGTGAAATTGATACTATAATGGATCCAAGGTTACAAGGAACATATGACACTGGGACAGCAAGTAAAGTGGTAGATGTAGCAATGGCTTGTGTAGCTCCGAGTTCTATTAAGAGGCCAACAATGAACGAAGTGATGATAGAATTAAAACAATGTTTTCCCATGGAGAATCTTGATTGTTCATCATCAATTGAATCCTCAGTGGCACCATCAATTAGCGGAAAAAGTTCTCTTGAGAGGTAG 2523 0.4039 MEIGPQWIVSSKLNTWLWFVLVPIFITHANSRLGKPVGREITNDNHPDFISIDCGSHRDYWDQATGIWYQTDEGFVETGTNHMISSSVHLSYRYFGEQLNTLRSFPEGDRNCYTLKPKQGKNNSYLIRAFFAYGNYDSKNETPSFDLYIGVNYWHTINEDQHHFIFAEVIHTPSSDTIQLCLVKTGPTIPYISTLVLRPLNNSIYQTMSSTTSQPLLDHQTRIDVGFHGWPIHSRYKDDVYDRLWRHDQYNVTNGWHPLDESIDVDPSTSAYKLPSQVLRTASQSPNVSYPLKFDYDTLFKDLDTNYEYRVYFHFAEIEALPPGQNRIINITLNSKPFLSHPLVLQYMKPVTISPQDAVRGRISFSISATPESAAPPILNAFEAYKLIPGLYSPTDARDAAAIMDIKSAYHITWLNWQGDPCLPKQFAWEGLTCNSDTNPRITALNLSSSKLTGEINISFSYLTELEILDLSNNYLEGPVPEFLAELPKLKLLNLTGNKLSGPIPKALKKKADTTLQLSCSNTFDYVDSNTQEVTYGEILSITNNLERVVGKGGYGTVYYGCIGERQVAVKMLSPSTQGFQQFQTEAKILTRVHQKCLTPLIGYCNEASALIYKYMPNGNLADHLSDKNQFSLVWNQRLQIALDSAIGLEYLHKCCKPPIVHRDVKTSNILLDENFNAKISDFGLSRIFSNECDTHVLTKVAGTPGYFDPEYYKTNKLTEKSDVYSFGIVLLEIITGHPAIFKNHENTHIVQWVNSMLEDEGEIDTIMDPRLQGTYDTGTASKVVDVAMACVAPSSIKRPTMNEVMIELKQCFPMENLDCSSSIESSVAPSISGKSSLER* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0954 840 Pfam Leucine rich repeat 440 500 IPR001611 GO:0005515
Apr10g0954 840 Gene3D Transferase(Phosphotransferase) domain 1 616 826 - -
Apr10g0954 840 ProSitePatterns Protein kinases ATP-binding region signature. 550 571 IPR017441 GO:0005524
Apr10g0954 840 Gene3D Phosphorylase Kinase; domain 1 526 615 - -
Apr10g0954 840 Gene3D - 221 386 - -
Apr10g0954 840 SUPERFAMILY L domain-like 399 510 - -
Apr10g0954 840 PANTHER OS07G0107800 PROTEIN-RELATED 526 824 - -
Apr10g0954 840 PANTHER OS07G0107800 PROTEIN-RELATED 44 519 - -
Apr10g0954 840 CDD STKc_IRAK 550 811 - -
Apr10g0954 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 660 672 IPR008271 GO:0004672|GO:0006468
Apr10g0954 840 Pfam Protein tyrosine and serine/threonine kinase 546 806 IPR001245 GO:0004672|GO:0006468
Apr10g0954 840 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED 44 519 - -
Apr10g0954 840 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED 526 824 - -
Apr10g0954 840 Pfam Malectin-like domain 52 386 IPR024788 -
Apr10g0954 840 SMART serkin_6 544 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0954 840 SUPERFAMILY Protein kinase-like (PK-like) 529 809 IPR011009 -
Apr10g0954 840 Gene3D Ribonuclease Inhibitor 400 521 IPR032675 -
Apr10g0954 840 ProSiteProfiles Protein kinase domain profile. 544 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0954 Apr-Chr10 22065251 22072361 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0954 49 833 Receptor kinase-like Gene Family AT2G19210 41.047 0.0 596
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Apr10g0954 Malectin_like 4.7e-87 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0954 - - aprc:113851016 1696.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0954 10 22065251 22072361 Apr10g0954 10 22065251 22072361 ECH