Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0953 ATGGACATTAAAAGCGCCTACCATATCACTTGGCTGAATTGGCAAGGGGACCCGTGTCTTCCAAAGCAATTTGCATGGGAGGGTCTCACTTGCAACTCTGACACCAATCCCAGGATCACAGCTTTGAACTTGAGCTCAAGCAAATTGACAGGGGAGATAAATATTTCATTCTCATATCTTACAGAACTAGAAATCCTGGATTTGTCAAATAACTATTTAGAAGGACCTGTGCCAGAATTTCTGGCAGAATTACCCAAGTTAAAATTACTTAATCTCACAGGGAACAAGCTTTCAGGCCCAATTCCTAAGGCTCTCAAGAAAAAGGCGGATACAACTCTGCAATTGAGTGTGACCGATAATCCTTATATTTGTATGTCGCATTCATGCGAAAGGAAGAACTTTACAGCACCACTTGTTGCTTCAGTTTCAGCTTTAATTGTAATCATTTTGGTTGCTCTTGGATTTTGGATAATCAAGAGAAGACCGAAAGTTATGCGTTCTGATTCTCAAAAGGGTAGATCATTGAAATCAAAACATCGAGCATTCAGTTATAGTGAGATTCTCAATATTACTGAAAACTTCAAAACTATTATTGGAGGAGGAGGATTTGGAAAAGTTTACTTTGGCACTCTGCAAGATAACACTGAAGTAGCTGTTAAGTTGCTTTCACCATCATCAATGCAAGGTTATAAGGAATTCCGATCTGAGGCACAACTTCTTATGATTGTTCATCATAGAAATTTGGTCTCTCTAATTGGGTATTGCGATGAAGGTGATATTAAAGCATTGATTTATGAATACATGGCCAATGGAAATGTCCAACAGCACTTATCAGTGGACAATCCAAATGTCTTGAAGTGGAATGAGAGACTTATTGTCGCAGTGGATGCAGCACAAGGACTAGATTATCTGCATAATGGCTGTAAACCTCCTCTTATCCACAGAGATTTGAAGACTTCCAACATATTACTAGATCAGAACATGCATGCCAAGATTTCTGATTTTGGTCTATGCAGAGCTTTTGGTAACGATATTGATTCTCATATATCAACTCGTCCTGCTGGCACAGCAGGTTATGTTGATCCAGAATTTCAGAGAACTGGAAACTCAACTAAGAAAAGTGATATCTACAGCTTTGGGATAATTTTATTTGAGCTAATCACTGGGCAACAAGCAGTATTAAGAGCACCTGGAAGAAAGATTCACATCCTTGAGTGGGTTATACCAATAGTTGAAAGAGGAGATATTCAAAATGTTATTGATCCAAGATTACAGGAAGAATTCAATGTCAATTCTGCATGGAAAGCTATAGAGATTGCCTTATCTTGCATTTCACCAGTTGCAGCTGAAAGGCCTGACATAAGTGAAACATTGGCAGAGCTAAAGGAATGTCTACCTTTGAGATGGTTCAGAGACAAGCTGAAAGCGAAATAA 1434 0.387 MDIKSAYHITWLNWQGDPCLPKQFAWEGLTCNSDTNPRITALNLSSSKLTGEINISFSYLTELEILDLSNNYLEGPVPEFLAELPKLKLLNLTGNKLSGPIPKALKKKADTTLQLSVTDNPYICMSHSCERKNFTAPLVASVSALIVIILVALGFWIIKRRPKVMRSDSQKGRSLKSKHRAFSYSEILNITENFKTIIGGGGFGKVYFGTLQDNTEVAVKLLSPSSMQGYKEFRSEAQLLMIVHHRNLVSLIGYCDEGDIKALIYEYMANGNVQQHLSVDNPNVLKWNERLIVAVDAAQGLDYLHNGCKPPLIHRDLKTSNILLDQNMHAKISDFGLCRAFGNDIDSHISTRPAGTAGYVDPEFQRTGNSTKKSDIYSFGIILFELITGQQAVLRAPGRKIHILEWVIPIVERGDIQNVIDPRLQEEFNVNSAWKAIEIALSCISPVAAERPDISETLAELKECLPLRWFRDKLKAK* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0953 477 Gene3D Phosphorylase Kinase; domain 1 174 267 - -
Apr10g0953 477 ProSitePatterns Protein kinases ATP-binding region signature. 198 220 IPR017441 GO:0005524
Apr10g0953 477 SUPERFAMILY L domain-like 24 107 - -
Apr10g0953 477 Pfam Leucine rich repeat 37 97 IPR001611 GO:0005515
Apr10g0953 477 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 2 469 - -
Apr10g0953 477 Gene3D Ribonuclease Inhibitor 3 121 IPR032675 -
Apr10g0953 477 ProSiteProfiles Protein kinase domain profile. 192 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0953 477 SMART serkin_6 192 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0953 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 312 324 IPR008271 GO:0004672|GO:0006468
Apr10g0953 477 PANTHER OS07G0107800 PROTEIN-RELATED 2 469 - -
Apr10g0953 477 Pfam Protein tyrosine and serine/threonine kinase 194 459 IPR001245 GO:0004672|GO:0006468
Apr10g0953 477 CDD STKc_IRAK 198 463 - -
Apr10g0953 477 Gene3D Transferase(Phosphotransferase) domain 1 268 468 - -
Apr10g0953 477 SUPERFAMILY Protein kinase-like (PK-like) 175 461 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0953 Apr-Chr10 22029959 22034941 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0953 2 465 Receptor kinase-like Gene Family AT1G51820 48.269 1.10e-157 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Apr10g0953 PK_Tyr_Ser-Thr 2.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0953 - - aprc:113851010 925.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0953 10 22029959 22034941 Apr10g0953 10 22029959 22034941 ECH