Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0952 ATGACATGGGATCAAAGAGATGACACTCATTTATTTTCTGATAAACGCTGGCAACAAATTGTAGGATTCATAAGCATTGACTGTGGAGCAAGTAGGGATTACGTGGACGAGAAAACGGGTTTTTTTTATCAGACCGACAAAGATTTTGTAGAAACGGGACAAAACTTTGAAGCATCACTCAATATTGTTAACGTAAACACCCCTGATTTTGGAAGAAAAATACACACACTAAGAAGCTTCCCTGAGGCAGATAGGAACTGTTATACGCTCAAACCCAAACAAGGTAAACACCAAAGTTACCTTATAAGAAGGGCATTCTTTGCATATGGAAACTATGATGGCAAAAATCAAACCCCATATTTTAATGTGTATCTTGGGATCAATTATTGGGACACCGTTGACATGGATATGTATTATGTTATTCCAATATTGCTGTCTCCAACTTTATCATGTGATGCAGCAAGCATGGAAATAGGACCACAATGGATTGTCTCCTCAAAGTTGAACACATGGCTATGGTTTGTCTTGGTTCCAATTTTCATTACTCACGCCAGCTCAAGACTAGACAAACCTGTTGGAAGAGAAATTACCAACGATAACCATCCAGATTTCATAAGCATAGATTGTGGATCACCCAGAGATTACTTGGATCAAGCAACTGGAATTTGGTATCAGACAGACGAAGGTTTTGTGGAAACAGGAACAAATCATAGGATTTCATCAAGTGTGTTCTTCGACAATCCCTACTTTGGGGAACAATTGAATACACTGAGAAGCTTTCCAAAGGGAGACAGAAACTGCTACACCCTAAAACCTAAACAAGGCAAAAATAATAGCTATTTAATCAGAGCTTTCTTTGCATACGGAAATTATGACTCCAAAAATGAAACCCCATCTTTCGACTTGTACATTGGGGTCAATTACTGGCATACAATAAATGAGGACCAACATCATTACATCTTTGCCGAGGTTATTCACACTCCCTCAAGTGACACTATACAATTGTGTCTTGTAAAGACTGGACCAACAATACCTTACATTTCTACATTGGAATTACGTCCTTTGAACAATTCCATTTATCAGACTACTTCACAAGCGCTACTGCATCAACATTTAAGGATCGATGTTGGCTTCCATGGATGGCCTCTTCACTCCAGGTACAAAGATGACGTCTATGATCGGATGTGGCGATATGACCAATATAACGATACAAATGGATGGCATCCTTTAGACGAATCAATTGATGTGGATCCTTCAACCAGTGCATATAAATTGCCAACCCAAGTACTAAGGACTGCATCCCAATCACTAAATGTCTCGTACCCCTTGAAATTTGACTATAGTTCTTTGTTTGACGACCTGGATACAAATTATGAGTATCGTGTCTACTTTCACTTTGCTGAAATTGAGGCACTTCCACCGGGTCAAAATAGAATTATCAATATCACCCTTAATTCTAAACCCGTCCTCTCACACCCTTCGGTTCTTCAATACATGAAGCCAGTCACCATTAGTCCTCAAGATGCAGTCCGAGGTAGAATTTCATTTAGCATTAGTGCAACGCCAGAATCTGCTGCTCCTCCCATCCTTAACGCCTTTGAGGCCTACAAGTTGATACCCGGTCTTTATTCCCCAACAGACGCTCGAGATGCTGGTGCTATTATGGACATTAAAAGCGCCTACCATATCACTTGGCTAAATTGGCAAGGGGACCCGTGTCTTCCAAAGCAATTTGCATGGGAGGGTCTCACTTGCAACTCTGACACCAATCCCAGGATCACAGCTCTGGATTTGTCATATAACTATTTAGAAGGACCTGTGCCAGAATTTCTGGCAGAATTACCCAAGTTAAAATTACTCAATCTCACAGGGAACAAGCTTTCAGGCCCAATTCCTAAGGCTCTCAAGAAAAAGGCCGATACAACTCTGCAATTGAGTTGTTCCAACACATTTGATTATGTGGACTCAAATACGCAAGAGGTCACCTACGGGGAGATTCTAAGTATCACCAATAACTTAGAGAGGGTGGTGGGTAAAGGAGGATATGGAACTGTCTACTATGGTTGCATAGGTGAAAGACAAGTAGCAGTGAAGATGCTTTCTCCTTCAACTCAAGGTTTTCAGCAATTTCAGACAGAGGCAAAAATTCTCAATAGAGTACATCACAAATGTTTGACTCCTCTCATTGGATATTGCAATGAAGCCTCGGCACTCATCTATAAATACATGCCCAACGGAAACTTGGCAGACCATCTTTCAGATAAAAATCAATTTTCGCTAGTTTGGAACCAGAGGCTTCAAATTGCTCTGGACTCTGCAATAGGCTTGGAGTATCTTCATAAATGTTGTAAGCCTCCAATTGTACACAGAGATGTCAAGACTAGTAACATTTTACTCGATGAAAATTTCAATGCTAAAATATCTGATTTTGGATTATCAAGGATCTTTTCGAATGAATGTGACACCCATGTGCTAACAAAAGTTGCAGGCACCCCAGGATACTTTGATCCTGAATACTACAAAACAAACAAGTTGACTGAAAAAAGTGATGTCTATAGTTTTGGAATTGTTCTCTTAGAGATAATCACGGGGCACCCTGCTATTTTGAAAAACCATGAGAACACACACATAGTTCAATGGGTGAATTCCATGTTAGATGATGAAGGTGAAATTGATACTATAATGGATCCAAGGTTACAAGGAACATATGACATTGGGACTGCAAGTAAAGTGGTAGATGTAGCAATGGCTTGTGTAGCTCCGAGTTCTATTAAGAGGCCAACAATGAACGAAGTGATGATAGAATTAAAACAATGTTTTCCCATGGAGAATCTTGATTGTTCATCATCAATTGAATCCTCAGTGGCACCATCAATTAGCGGAAAAAGTTCTCTCGAGAGGTAG 2904 0.4001 MTWDQRDDTHLFSDKRWQQIVGFISIDCGASRDYVDEKTGFFYQTDKDFVETGQNFEASLNIVNVNTPDFGRKIHTLRSFPEADRNCYTLKPKQGKHQSYLIRRAFFAYGNYDGKNQTPYFNVYLGINYWDTVDMDMYYVIPILLSPTLSCDAASMEIGPQWIVSSKLNTWLWFVLVPIFITHASSRLDKPVGREITNDNHPDFISIDCGSPRDYLDQATGIWYQTDEGFVETGTNHRISSSVFFDNPYFGEQLNTLRSFPKGDRNCYTLKPKQGKNNSYLIRAFFAYGNYDSKNETPSFDLYIGVNYWHTINEDQHHYIFAEVIHTPSSDTIQLCLVKTGPTIPYISTLELRPLNNSIYQTTSQALLHQHLRIDVGFHGWPLHSRYKDDVYDRMWRYDQYNDTNGWHPLDESIDVDPSTSAYKLPTQVLRTASQSLNVSYPLKFDYSSLFDDLDTNYEYRVYFHFAEIEALPPGQNRIINITLNSKPVLSHPSVLQYMKPVTISPQDAVRGRISFSISATPESAAPPILNAFEAYKLIPGLYSPTDARDAGAIMDIKSAYHITWLNWQGDPCLPKQFAWEGLTCNSDTNPRITALDLSYNYLEGPVPEFLAELPKLKLLNLTGNKLSGPIPKALKKKADTTLQLSCSNTFDYVDSNTQEVTYGEILSITNNLERVVGKGGYGTVYYGCIGERQVAVKMLSPSTQGFQQFQTEAKILNRVHHKCLTPLIGYCNEASALIYKYMPNGNLADHLSDKNQFSLVWNQRLQIALDSAIGLEYLHKCCKPPIVHRDVKTSNILLDENFNAKISDFGLSRIFSNECDTHVLTKVAGTPGYFDPEYYKTNKLTEKSDVYSFGIVLLEIITGHPAILKNHENTHIVQWVNSMLDDEGEIDTIMDPRLQGTYDIGTASKVVDVAMACVAPSSIKRPTMNEVMIELKQCFPMENLDCSSSIESSVAPSISGKSSLER* 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0952 967 ProSitePatterns Serine/Threonine protein kinases active-site signature. 787 799 IPR008271 GO:0004672|GO:0006468
Apr10g0952 967 Gene3D Ribonuclease Inhibitor 553 662 IPR032675 -
Apr10g0952 967 Gene3D Transferase(Phosphotransferase) domain 1 743 953 - -
Apr10g0952 967 SMART serkin_6 671 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0952 967 Pfam Protein tyrosine and serine/threonine kinase 673 933 IPR001245 GO:0004672|GO:0006468
Apr10g0952 967 ProSiteProfiles Protein kinase domain profile. 671 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0952 967 ProSitePatterns Protein kinases ATP-binding region signature. 677 698 IPR017441 GO:0005524
Apr10g0952 967 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED 652 951 - -
Apr10g0952 967 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED 199 647 - -
Apr10g0952 967 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED 18 139 - -
Apr10g0952 967 SUPERFAMILY L domain-like 576 637 - -
Apr10g0952 967 Pfam Malectin-like domain 207 537 IPR024788 -
Apr10g0952 967 Pfam Malectin-like domain 26 137 IPR024788 -
Apr10g0952 967 CDD STKc_IRAK 677 938 - -
Apr10g0952 967 Gene3D - 372 537 - -
Apr10g0952 967 Gene3D Phosphorylase Kinase; domain 1 663 742 - -
Apr10g0952 967 SUPERFAMILY Protein kinase-like (PK-like) 656 936 IPR011009 -
Apr10g0952 967 PANTHER OS07G0107800 PROTEIN-RELATED 18 139 - -
Apr10g0952 967 PANTHER OS07G0107800 PROTEIN-RELATED 652 951 - -
Apr10g0952 967 PANTHER OS07G0107800 PROTEIN-RELATED 199 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0952 Apr-Chr10 22016962 22027200 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0952 204 938 Receptor kinase-like Gene Family AT2G19190 42.029 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Apr10g0952 Malectin_like 4.6e-88 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0952 - - aprc:113851009 1971.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0952 10 22016962 22027200 Apr10g0952 10 22016962 22027200 ECH