Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0944 ATGGGGAAGGCTAGCAGGTGGCTGAAGGGGTTGTTGGGCATGAAGAAGGAGAAGGACCACAGTGACAATTCAGGGTCTTTGGCTCCTGACAAGAAGGAGAAGAAAAGGTGGAGTTTTGCTAAGCCAGGGAAGGATGTGGCACCTCACATTACTTCTACTCCCACTGCTGTTTCAGGCACTGATAACACCTGGCTCAGATCCTATATTGCTGAGACTGAGAATGAGCAGAACAAGCATGCAATTGCTGTGGCAGCTGCCACAGCCGCCGCCGCCGATGCTGCCGTGGCTGCAGCACAGGCGGCGGTGGCTGTGGTGAGGCTAACAAGCCAGGGGAGAGGTACATTGTTCAGTGGGAGCAGGGAGAAGTGGGCTGCTGTGAAGATTCAAACTTTTTTCAGAGGCTATTTGGCACGGAAGGCTCTTAGAGCATTGAAAGGATTGGTTAAGATTCAAGCTCTTGTTAGAGGCTACCTAGTTAGGAAGAGAGCTGCTGCAACACTTCACAGTATGCAAGCTCTAATAAGAGCCCAGACTGCTGTTAGAACACAACGAGCTCGTCGATCCATGAGCAAAGAAAACAGATTTCTACCTGAAGTTCTTGCAAGAAAATCTATGGAACGATTTGATGAAACAAGGAGTGAATTCCACAGTAAAAGGCTAGCTTCACCCTATGAAACACCCTTGAATGGGTTTGATGAAAGCCCCAAAATTGTTGAAATTGACACTTACAAGACTAGATCAAGATCTAGGCGCTTTACATCCACAATGTCTGAATGTGGTGAAGACATGTCTTGTCATGCAATTTCATCACCACTTCCTTGCCCAATCCCAGGTAGAATCTCAGTTCCTGATTGCAGACATGTTCCAGATTATGATTGGTACTTCAATGTCGATGAGTGTAAGTTCTCCACTGCTCATAGCACCCCACGTTTCACAAACTATGTGCGTCCTAATGCACCAGCTACACCAGCCAAGAGTTTTTGTGGAGACACCTTCTATAGACCATGCTCCAATTTCCCAAACTACATGGCCAATACTCAGTCATTCAAGGCAAAACTAAGGTCTCATAGTGCTCCAAAACAAAGACCGGAACCCAAGAAAAGGCTCTCACTTAATGAAATGATGGCTGCTAGAAATAGCATTAGTGGTGTTAGAATGCAAAGGCCATCCAATTTCTTCCAAACTCAAGAGTCTTGGAATTTTTGA 1206 0.461 MGKASRWLKGLLGMKKEKDHSDNSGSLAPDKKEKKRWSFAKPGKDVAPHITSTPTAVSGTDNTWLRSYIAETENEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGTLFSGSREKWAAVKIQTFFRGYLARKALRALKGLVKIQALVRGYLVRKRAAATLHSMQALIRAQTAVRTQRARRSMSKENRFLPEVLARKSMERFDETRSEFHSKRLASPYETPLNGFDESPKIVEIDTYKTRSRSRRFTSTMSECGEDMSCHAISSPLPCPIPGRISVPDCRHVPDYDWYFNVDECKFSTAHSTPRFTNYVRPNAPATPAKSFCGDTFYRPCSNFPNYMANTQSFKAKLRSHSAPKQRPEPKKRLSLNEMMAARNSISGVRMQRPSNFFQTQESWNF* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0944 401 PANTHER - 1 392 - -
Apr10g0944 401 MobiDBLite consensus disorder prediction 10 42 - -
Apr10g0944 401 Pfam IQ calmodulin-binding motif 148 162 IPR000048 GO:0005515
Apr10g0944 401 Pfam IQ calmodulin-binding motif 123 142 IPR000048 GO:0005515
Apr10g0944 401 Pfam Protein of unknown function (DUF4005) 314 382 IPR025064 -
Apr10g0944 401 ProSiteProfiles IQ motif profile. 121 149 IPR000048 GO:0005515
Apr10g0944 401 PANTHER IQ-DOMAIN 5-RELATED 1 392 - -
Apr10g0944 401 MobiDBLite consensus disorder prediction 1 49 - -
Apr10g0944 401 Gene3D - 63 146 - -
Apr10g0944 401 ProSiteProfiles IQ motif profile. 145 172 IPR000048 GO:0005515
Apr10g0944 401 SMART iq_5 120 142 IPR000048 GO:0005515
Apr10g0944 401 SMART iq_5 143 164 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0944 Apr-Chr10 21967933 21969728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0944 1 386 IQD Protein Family AT3G16490 54.887 6.43e-111 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0944 - - gmx:100797686 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0944 10 21967933 21969728 Apr10g0944 10 21967933 21969728 ECH