Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr10g0940 | ATGATTTTTGTACGAAAATTCAATTGGGAGTTGCTTCTCTTTGTGCTGATTTCGTTTCACTTTCACTTCTCCACTTGTTATCCCATGGAACCCATGAACTGTACGGACACAAGCCGTGTTTGCACTTCTTTCTTGGCCTTTAAGCCTGAAGAAAATCAGACACTGGCGGTGATTGAGAGCATGTTTGATGTGTTACCTGGTGACATCACTGTTGAAGGCAATGGGTGGGGTTACATGTTCATAAGGAAGAACTGTTCTTGTGCTGCTGGTATCAAGAAATATGTGACCAACACTACTTTCACTGTGAAATCCAATGAAGGGTTGGTGTATGAAATGGTGATGGATGCCTATGATGGCCTTGCTTTTCTTCCCAACACTACTAGGAGGGCAAAGAATGGTGCTGTTGTGTCACTGAGGTTGTTTTGTGGTTGCTCCAGTGGACTTTGGAACTATCTGGTGAGTTATGTGATGAGAGATGGGGACAGTGTTGAATCCTTGGCAAGCAGGTTTGGGGTTAGTATGGATAGCATTGAGACTGTGAATGGCATCGATAATCCTGATAATGTCACTGTTGGTTCACTTTATTATATACCCATGGATTCGGTTCCTGGTGATCCATATCCCCTGAATAATGCGGCTCCACCAGTTCCTGTTCCTGCCCCATCCGATAATAACTTTTCAGCTGATCAAGTCAATCACAAGACTCATGTTCCCTATGGATGGATCGTTGGGGGTTTAGGAGTTGGTCTTTTATTGATAATATTAGCTGTAATTCTCTGTGTTTGCCTGAGATCATCAAAGTGTTTTGCTGAAGCCAAAAGTCATGAGAAAGATGCCGAGGGCAAGATCTCTCATAAATTTCATATTCTTCGGAACCCAAGTTTTTTTTGTGGTTCTGGAAGGTACATATGTGGCAAACCTGTTGACCAGAAGCAAAAAGATGGTGAATCTAGCAATCACACAATTACCATTCCCAAAGCTTCAACTCTAGGGCCTGACGTATTTGACATGGATAAGCCTGTAGTCTTTTCATATGAAGAGATTTTTTCCTCAACTGATGGTTTCTCAGATTCAAATCTACTTGGGCATGGAACATATGGTTCTGTTTATTATAGCCTCCTTCGCGACCAGGAAGTTGCTATTAAAAGAATGACAGCTACTAAAACAAAAGAATTTATGTCAGAGATGAAGGTTTTATGCAAGGTTCATCATGCTAATCTGGTAGAATTGATTGGCTATGCAGCTAGTCATGAAGAGCTTTTCCTGGTTTATGAATATGCTCAGAAGGGTTCACTCAGAAGCCATTTGCACGATCCTCAAAATAAGGGTCATTCCCCACTTTCTTGGATCATGAGGGTCCAGATTGCGCTTGATGCTGCTAGGGGCCTTGAATACATACATGAACACACAAAAACTCATTATGTCCACCGTGATATCAAGACAAGCAACATTTTACTTGATGCTTCTGTTAGAGCAAAGATTTCAGATTTTGGGTTAGCAAAACTTGTTGGGAAAGCAAATGAAGGAGAAATTTCAACTACTAAAGTTGTTGGTACATATGGATATCTTGCACCAGAATATTTGAGTGATGGTCTTGCAACTACTAAAAGTGATGTATATGCATTTGGTGTTGTCCTTTTTGAGATTATATCAGGAAAGGAGGCTATTATTCGATCAGAAGGCACAATGACAAAAAATGCTGAAAGACGTTCACTGGCATCCATAATGTTGGCGGTTCTTAGGAACTCACCTGATTCAATGAGCATGTCAAGCCTGAGAGATTATATTGATCCAAATATGATGGATCTGTATCCCCATGATTGTGTATTTAAGATGGCCATGCTGGCAAAGCAATGTGTGGATGATGATCCCATCTTAAGACCTGATATGAGACAAGTTGTGATTTCACTCTCACAAATTCTCTTGTCTTCTGTTGAGTGGGAAGCAACACTTGCAGGGAATAGCCAAGTATTCAGTGGCCTTGTCCAGGGAAGATAA | 1998 | 0.4104 | MIFVRKFNWELLLFVLISFHFHFSTCYPMEPMNCTDTSRVCTSFLAFKPEENQTLAVIESMFDVLPGDITVEGNGWGYMFIRKNCSCAAGIKKYVTNTTFTVKSNEGLVYEMVMDAYDGLAFLPNTTRRAKNGAVVSLRLFCGCSSGLWNYLVSYVMRDGDSVESLASRFGVSMDSIETVNGIDNPDNVTVGSLYYIPMDSVPGDPYPLNNAAPPVPVPAPSDNNFSADQVNHKTHVPYGWIVGGLGVGLLLIILAVILCVCLRSSKCFAEAKSHEKDAEGKISHKFHILRNPSFFCGSGRYICGKPVDQKQKDGESSNHTITIPKASTLGPDVFDMDKPVVFSYEEIFSSTDGFSDSNLLGHGTYGSVYYSLLRDQEVAIKRMTATKTKEFMSEMKVLCKVHHANLVELIGYAASHEELFLVYEYAQKGSLRSHLHDPQNKGHSPLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKTSNILLDASVRAKISDFGLAKLVGKANEGEISTTKVVGTYGYLAPEYLSDGLATTKSDVYAFGVVLFEIISGKEAIIRSEGTMTKNAERRSLASIMLAVLRNSPDSMSMSSLRDYIDPNMMDLYPHDCVFKMAMLAKQCVDDDPILRPDMRQVVISLSQILLSSVEWEATLAGNSQVFSGLVQGR* | 666 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr10g0940 | 665 | Pfam | LysM domain | 155 | 192 | IPR018392 | - | |
Apr10g0940 | 665 | PANTHER | BNAA06G02020D PROTEIN | 32 | 665 | - | - | |
Apr10g0940 | 665 | SUPERFAMILY | LysM domain | 153 | 199 | IPR036779 | - | |
Apr10g0940 | 665 | Gene3D | Transferase(Phosphotransferase) domain 1 | 428 | 652 | - | - | |
Apr10g0940 | 665 | Pfam | Protein tyrosine and serine/threonine kinase | 359 | 635 | IPR001245 | GO:0004672|GO:0006468 | |
Apr10g0940 | 665 | ProSitePatterns | Protein kinases ATP-binding region signature. | 361 | 382 | IPR017441 | GO:0005524 | |
Apr10g0940 | 665 | SMART | LysM_2 | 154 | 198 | IPR018392 | - | |
Apr10g0940 | 665 | SMART | serkin_6 | 355 | 642 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr10g0940 | 665 | ProSiteProfiles | LysM domain profile. | 153 | 197 | IPR018392 | - | |
Apr10g0940 | 665 | Gene3D | Phosphorylase Kinase; domain 1 | 331 | 426 | - | - | |
Apr10g0940 | 665 | PANTHER | CHITIN ELICITOR RECEPTOR KINASE 1-RELATED | 32 | 665 | IPR044812 | GO:0019199|GO:0045087 | |
Apr10g0940 | 665 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 474 | 486 | IPR008271 | GO:0004672|GO:0006468 | |
Apr10g0940 | 665 | SUPERFAMILY | Protein kinase-like (PK-like) | 334 | 637 | IPR011009 | - | |
Apr10g0940 | 665 | ProSiteProfiles | Protein kinase domain profile. | 355 | 642 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr10g0940 | 665 | CDD | LysM | 153 | 197 | IPR018392 | - | |
Apr10g0940 | 665 | Gene3D | LysM domain | 150 | 203 | IPR036779 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr10g0940 | Apr-Chr10 | 21930334 | 21936931 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr10g0940 | 30 | 665 | Receptor kinase-like Gene Family | AT1G51940 | 69.876 | 0.0 | 874 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LysM | Apr10g0940 | PK_Tyr_Ser-Thr | 2.9e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr10g0940 | - | - | gmx:100796989 | 1200.65 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Apr10g0940 | 10 | 21930334 | 21936931 | Apr10g0940 | 10 | 21930334 | 21936931 | ECH |