Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0910 ATGGGCAGTTTAGTGGCAGTGACACTTATCTCTGCCATGCTCATGATCATGTCCACAAGCATTGCACTTTCAAATATGAATAAAGAAAAACGGGCTTTGCTCCAAACGGGTTGGTGGAATCATCACCCAAATATCTCAAACCATTGTGATTGGGAAGGTATTAAATGCAATGAAGCTGGAAGCGTTACAGATATTTTTGCATTGGAGTTAAGTATTCCTCCTTCACAAGAAATGCTGGAGATTGGGAAGTTGAAAGTCACTGCCTTCCCCAATTTAGTGACTCTAGATCTATATGGAATGGGACTTAGAGGAAGCATCCCTACAGAAATAAGCACACTTACAAAGCTTGAATTTCTTTACATAACCAATAATCATCTTCAAGGTTCAATACCAGTAGAGTTAGGGAATTTGACACGTTTGTGTGGCTTGTCTCTCTATAATAATTCGCTAACGGGTTCAATCCCTTCTACTTTGAGTCAATTGGTGAATTTGACCTTTCTCCTTCTTTCTTTCAACCAACTTGAAGGCACCATACCAATTGAACTTGGGAATTTGACACAACTGACGGCATTATATGTCTCAAACAATTCAATCTCTGGTTCACTTCCTTCTACTCTGGGTCAATTAGAGAATTTACAAATTCTTCTTCTTGATTATAACCATATTCAAGGTCCCATACCGGGAGAATTTGGAAATTTAAAAAGTTTGCAAATATTATATCTCTCAAAAAATTTACTTACCGGTTCAATTCCTCCTACTTTGGGTCGATTGGAGAATTTGACACATCTCTTCCTTGAACATAACCAAATACAAGGTCACATACCTGAAGAACTAGGAAATTTGTCCAATTTAGACACTTTACATCTTTCACATAATAAGATCTTTGGTTTAATACCTCCCAAACTTTTTCAAATGGACAAAATGCATTCTTTATATCTCTCTTCAAATCAGTTATGTGGTTCGATCCCATTTAAAACTATGAAATGTCCCTCTATTGCAACGATTGATGTAAGTTATAATTTGCTAAATGGAAGCATAACTGGCCAAATTGGTTGTGTAAATAACCTTGACCTAAGCCACAATTTTCTTATTGGCAAGATTCCTTCTCTTTTAGCCATGAATTCCATACTAGATAGGTTGGATCTTAGTTATAACAATCTCACAGGTAAACTAAATAAGGCACTTGCTACTCTATCATATATAAACCTTTCATACAATTCTTTTGACTTTTCACAGGACCTTGATGTGAAGTCAAACATACCTGATTATTGTTCTTTCCCAAAAAACTCACTAAATAGTTACAACCCACCCGATTTTACATCTTGTTATCCTTCCATCCAAACCAATTATCGAACCAGTGAAGCTAAGCCTACCATTGTGTTTGTTCTTCCTATCATCTTGACTATTCCTTTTGCAATTCTTCTAGCATTATATTTCGCAAGATGCATGTCTAGAACCAAATTTGAAGGAAGATTAGCAAAGAGTGGGGACTTGTTTTCTGTATGGAACTATGATGGTAAAATTGCATTTGAAGACATCATTGAAGCCACTGAGGACTTTCACATCAAGTACTGCATTGGAACAGGTGCATATGGCAGTGTTTATAGAGCACAATTGCCAAGTGGCAAAATTGTTGCATTGAAGAAACTTCACCAAATGGAATCTGAAAATCCATCATTTGACAAGAGTTTTCGGAACGAGGTCAAGATGCTAACAGAAATACGCCACAAAAACATTGTGAACCTTCATGGCTTTTGCCTCCACAATCGGTGCATGTTTCTAATCTATCAATACATGGAAAGTGGTAGCTTATTTTATGCCTTGAATAATGACATGGAAGCTATGGAATTAAATTGGAGCGAGAGGGTGAATATCATTAGGGGAATGGCACATGCTTTGTCCTACCTGCATCATGATTGTACCCCACCCATTCTACACAGAGATGTTACAAGTAGCAATGTTTTATTGAACTCTCAGTTGGAGGCTTTTGTCTCCGACTTTGGCACAGCTAGATTTCTTGATCCCGACTCTTCAAATCAAACCCTAGTAGTTGGCACATGTGGATATGTTGCCCTAGGTGAAGGTTTTATTTTTATTTCTAAAATAAGAAAATCTATTTATGACTTCACTGAATAA 2136 0.3694 MGSLVAVTLISAMLMIMSTSIALSNMNKEKRALLQTGWWNHHPNISNHCDWEGIKCNEAGSVTDIFALELSIPPSQEMLEIGKLKVTAFPNLVTLDLYGMGLRGSIPTEISTLTKLEFLYITNNHLQGSIPVELGNLTRLCGLSLYNNSLTGSIPSTLSQLVNLTFLLLSFNQLEGTIPIELGNLTQLTALYVSNNSISGSLPSTLGQLENLQILLLDYNHIQGPIPGEFGNLKSLQILYLSKNLLTGSIPPTLGRLENLTHLFLEHNQIQGHIPEELGNLSNLDTLHLSHNKIFGLIPPKLFQMDKMHSLYLSSNQLCGSIPFKTMKCPSIATIDVSYNLLNGSITGQIGCVNNLDLSHNFLIGKIPSLLAMNSILDRLDLSYNNLTGKLNKALATLSYINLSYNSFDFSQDLDVKSNIPDYCSFPKNSLNSYNPPDFTSCYPSIQTNYRTSEAKPTIVFVLPIILTIPFAILLALYFARCMSRTKFEGRLAKSGDLFSVWNYDGKIAFEDIIEATEDFHIKYCIGTGAYGSVYRAQLPSGKIVALKKLHQMESENPSFDKSFRNEVKMLTEIRHKNIVNLHGFCLHNRCMFLIYQYMESGSLFYALNNDMEAMELNWSERVNIIRGMAHALSYLHHDCTPPILHRDVTSSNVLLNSQLEAFVSDFGTARFLDPDSSNQTLVVGTCGYVALGEGFIFISKIRKSIYDFTE* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0910 711 Gene3D Ribonuclease Inhibitor 182 436 IPR032675 -
Apr10g0910 711 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 23 692 - -
Apr10g0910 711 SMART LRR_typ_2 257 280 IPR003591 -
Apr10g0910 711 SMART LRR_typ_2 113 137 IPR003591 -
Apr10g0910 711 SMART LRR_typ_2 161 184 IPR003591 -
Apr10g0910 711 SMART LRR_typ_2 209 232 IPR003591 -
Apr10g0910 711 SMART LRR_typ_2 233 256 IPR003591 -
Apr10g0910 711 SMART LRR_typ_2 185 208 IPR003591 -
Apr10g0910 711 SMART LRR_typ_2 281 305 IPR003591 -
Apr10g0910 711 Pfam Leucine rich repeat 211 270 IPR001611 GO:0005515
Apr10g0910 711 ProSitePatterns Tyrosine protein kinases specific active-site signature. 644 656 IPR008266 GO:0004672|GO:0006468
Apr10g0910 711 SMART LRR_sd22_2 185 214 - -
Apr10g0910 711 SMART LRR_sd22_2 113 145 - -
Apr10g0910 711 SMART LRR_sd22_2 257 286 - -
Apr10g0910 711 SMART LRR_sd22_2 161 182 - -
Apr10g0910 711 Pfam Protein kinase domain 521 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0910 711 SUPERFAMILY Protein kinase-like (PK-like) 505 691 IPR011009 -
Apr10g0910 711 Gene3D Phosphorylase Kinase; domain 1 485 598 - -
Apr10g0910 711 ProSitePatterns Protein kinases ATP-binding region signature. 526 548 IPR017441 GO:0005524
Apr10g0910 711 Gene3D Transferase(Phosphotransferase) domain 1 599 693 - -
Apr10g0910 711 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 23 692 - -
Apr10g0910 711 Gene3D Ribonuclease Inhibitor 21 181 IPR032675 -
Apr10g0910 711 SUPERFAMILY RNI-like 88 414 - -
Apr10g0910 711 ProSiteProfiles Protein kinase domain profile. 520 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0910 Apr-Chr10 21587265 21590374 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0910 64 702 Receptor kinase-like Gene Family AT4G08850 35.466 7.78e-124 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr10g0910 Pkinase 2.7e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0910 - - gmx:100789677 1064.68