Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0908 ATGGCCAACCTTGTGGAAGAAAGAGATTTGGTTGCTATGATCACTAAAGGAGTTCAATGCATGCACATTGGTATGATCACAGAACTAAACATGGCAACATATGAAAAATCCCATGAGTGGTGGTTAGATTCTGGTGCTACTGTTCATGTTTGCAATGATCACAATCAATTCAAGATATATGAAGAAGTGAACAACCAAGAAGTATTAATGGGAAATGACAATTCGGCCAAAGTGTGTGGTCAAGAAACAGTAGAGTTGAACTTTACATTGAGAAAGAAGTTAAACTTGGTGAATGTACTTCATGTTCCAGATATAAGGAAGAAATTAGTTTTTGCTAGTCTCTTATGTAAAAGAGGATTCAAAATTGTGATGGAATCTGATAAGATTATCTTGCTTAAGAATGATATGATGGAAGCTTCTAATTCCACTTCCATGAATGAGGAAAAACAGGCTTTGGTCCAGAGTGGCTGGTGGAATGATTACCTCAATATCTCAAACCATTGTCTTTGGGGAGGTATCAAATGCAATGAAGTTGGAAGTGTTATAGGGATTTACTCAGGGGATTTAAATATTCATTATCCATTATCAGAAGAAATGAAGCAGATTAAGAAGTTGAATGTAACTTCCTTCCCTAATATAGTCATTCTAAGTTTATCTGGAATGGGTCTTATGGGAAGCATTCCTCCAGAAATAACCACGCTTACAAAACTTGAATTTCTTTACCTGTCAGATAATTACCTTCAAGGTCCTATACCTCTACATCTAGGCAATATGACAAGTTTGAAGATATTGTCTCTCTATAACAATTCACTAACAGGTTCAATCCCTTGTACATTAAGTCGGTTGATGAATTTAACCTATCTCTATCTTGATTTAAACCAACTTGAAGGTCTCATACCAATAGGATTAGGGTATTTGACACAATTGCAGGAAATATATCTGTCACATAATTCCTTTACCGGTTTAATCCCACATACTTTGGGTTTATTGAAGAATTTGACCCACCTCTTCCTTGATTCTAACCAAATTGAAGGTCCCATACCAATAGGAGTAGGGAACTTAACATCATTACAATACTTAAATCTTTCAAGTAACTCCCTTTCTGGTTCAATACCATCACAGATTTCAAAAGCTTTCAGTCTTTCATATCTAGACCTTTCCCACAACCACCTCACAGGCTCTATCCCATCTCCTATCCTGAATTGTCCACTTGATGCAACAGTGGATTTAAGCTGTAACTTGTTAAATGGAAGCATCACTTCCCAAATTGGTTGTGTCACTAACCTTAACCTTAGTCATAATTTTTTCAGCGGCCAGGTTCCATCTGTTTTTGGAATAAATTCTATGGTGGATAGGTTGGATCTTAGTTATAATAATCTCACAGGTAAGTTACATAAGGAACTTGCTACTTTAGGATATATAAATCTTTCATACAATTTCTTTGACTTTTCAGAAAACCTTGACTCAAAGTCTCAATTACCAGACTTTTGTTCTTTCTCAAAAAATGCACTTATCACTTACGACCCACCAAATTACACAGCTTGTCATTATGTCCACCAAACCAATTCTCAAACTGGTACAACAACTAGTAAAGTTAAGACTATCATTGTAATTTTTCTTCCTATCACTTGCATCATTCTTTCTGTACTTGCAACATTATATTTCCTAAAGTGTATGAACAAGGCTAAATTTGAAGGAAGATCAACAAAGAATGGAGACCTGTTTTCAATATGGAACTTTGATGGTAAAATTGCATTTGAAGACATCATTGAAGCAACTGAAGACTTTCACATCAAGTACTGCATTGGGACTGGTGCATATGGAAGTGTGTATAGAGCTCAATTACCAAGTGGCAAAATTGTTGCATTGAAAAAACTTCACCAAATGGAATCTCAAATCCCATCTTTTGACAAGAGTTTTCGCAATGAGGTCAAGATGTTAACAGAAATCCGTCACAAAAATATTGTAAAGCTCCATGGCTTTTGTCTCCACAATCGGTGCATGTTTTTGGTTTATCAATACATGGAAAGAGGTAGCTTATTTTGTCTCTTGAGCACTGATGAGGAAGCTAAGGAGTTAAATTGGAGTGAGAGGGTGAATATCGTTAGGGGAATGGCACATGCTTTGTCCTACATGCATCATGATTGTAACCCACCTATTGTTCATCGTGATGTAACAAGTAGCAATGTTTTATTAAACTCACAATTAGAGCCCTTCATCTCAGATTTTGGCACAGCTAGACTACTTGATCCTGATTCTTCAAATCAAACCTTAGTAGTTGGAACATACGGATATATTGCTCCAGAGTTTGCTTACACATTGACTATAACAGAAAAATGTGATGTTTATAGTTTTGGAGTTGTGGCATTGGAAACATTGATGGGAAGACATCCAGGAGAGTTTATCTCATCTTTATCAAACTCATCTACGGAAAACATGTTGTTGAAGGATTTGTTGGATTCACGTCTTCCTCTTCCAAGCTTTCAAAAAGATGCTCAAGATATAATGATTGTGGGAACACTAGCATTGGCATGCTTGTGTTCTAAACCAAAGTTTAGACCATCAATGCAACAAGTGGCTAAAGAACTATGTTCTTCCAAACTTTCACTACCTTTGCCTTTCAGTGAAATTTCAATTAATCAGTTGATGACTCAAGATATACTGTCTTTCATTTGA 2676 0.361 MANLVEERDLVAMITKGVQCMHIGMITELNMATYEKSHEWWLDSGATVHVCNDHNQFKIYEEVNNQEVLMGNDNSAKVCGQETVELNFTLRKKLNLVNVLHVPDIRKKLVFASLLCKRGFKIVMESDKIILLKNDMMEASNSTSMNEEKQALVQSGWWNDYLNISNHCLWGGIKCNEVGSVIGIYSGDLNIHYPLSEEMKQIKKLNVTSFPNIVILSLSGMGLMGSIPPEITTLTKLEFLYLSDNYLQGPIPLHLGNMTSLKILSLYNNSLTGSIPCTLSRLMNLTYLYLDLNQLEGLIPIGLGYLTQLQEIYLSHNSFTGLIPHTLGLLKNLTHLFLDSNQIEGPIPIGVGNLTSLQYLNLSSNSLSGSIPSQISKAFSLSYLDLSHNHLTGSIPSPILNCPLDATVDLSCNLLNGSITSQIGCVTNLNLSHNFFSGQVPSVFGINSMVDRLDLSYNNLTGKLHKELATLGYINLSYNFFDFSENLDSKSQLPDFCSFSKNALITYDPPNYTACHYVHQTNSQTGTTTSKVKTIIVIFLPITCIILSVLATLYFLKCMNKAKFEGRSTKNGDLFSIWNFDGKIAFEDIIEATEDFHIKYCIGTGAYGSVYRAQLPSGKIVALKKLHQMESQIPSFDKSFRNEVKMLTEIRHKNIVKLHGFCLHNRCMFLVYQYMERGSLFCLLSTDEEAKELNWSERVNIVRGMAHALSYMHHDCNPPIVHRDVTSSNVLLNSQLEPFISDFGTARLLDPDSSNQTLVVGTYGYIAPEFAYTLTITEKCDVYSFGVVALETLMGRHPGEFISSLSNSSTENMLLKDLLDSRLPLPSFQKDAQDIMIVGTLALACLCSKPKFRPSMQQVAKELCSSKLSLPLPFSEISINQLMTQDILSFI* 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0908 891 Gene3D Ribonuclease Inhibitor 298 534 IPR032675 -
Apr10g0908 891 SUPERFAMILY Protein kinase-like (PK-like) 578 863 IPR011009 -
Apr10g0908 891 Pfam Leucine rich repeat 284 343 IPR001611 GO:0005515
Apr10g0908 891 Gene3D Ribonuclease Inhibitor 133 297 IPR032675 -
Apr10g0908 891 ProSiteProfiles Protein kinase domain profile. 596 868 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0908 891 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 341 882 - -
Apr10g0908 891 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 145 372 - -
Apr10g0908 891 Pfam Leucine Rich Repeat 356 375 IPR001611 GO:0005515
Apr10g0908 891 Pfam Leucine Rich Repeat 380 402 IPR001611 GO:0005515
Apr10g0908 891 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 341 882 - -
Apr10g0908 891 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 145 372 - -
Apr10g0908 891 Gene3D Transferase(Phosphotransferase) domain 1 675 870 - -
Apr10g0908 891 ProSitePatterns Tyrosine protein kinases specific active-site signature. 720 732 IPR008266 GO:0004672|GO:0006468
Apr10g0908 891 SUPERFAMILY L domain-like 208 481 - -
Apr10g0908 891 ProSitePatterns Protein kinases ATP-binding region signature. 602 624 IPR017441 GO:0005524
Apr10g0908 891 ProSiteProfiles Leucine-rich repeat profile. 380 402 IPR001611 GO:0005515
Apr10g0908 891 Pfam Protein kinase domain 597 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0908 891 Gene3D Phosphorylase Kinase; domain 1 559 674 - -
Apr10g0908 891 SMART LRR_typ_2 330 353 IPR003591 -
Apr10g0908 891 SMART LRR_typ_2 306 329 IPR003591 -
Apr10g0908 891 SMART LRR_typ_2 258 281 IPR003591 -
Apr10g0908 891 SMART LRR_typ_2 354 378 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0908 Apr-Chr10 21552280 21565849 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0908 213 768 Receptor kinase-like Gene Family AT4G08850 39.583 5.70e-120 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr10g0908 Pkinase 7.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0908 - - aprc:113851126 996.497