Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0894 ATGGCACAATTCAACTTTACATTACTATCCATTTTCCTTTCTCTCCTCTTTTTAAATTTTGCCGCGCCAGTTGAACCATCAAGGCATCACAATTCCCAAACAATGTCCTACATAAAGTCCTCTTGCGATGGCACCCTCTACCCAAAACTTTGCATTCGTTACCTGGCCCAATATGCCAAATCCACCATTAATGGCCCACAAAACTTAGCCCAATATGCCTTGTCAGTGAGCCTCTCTAGAGCACAAAACACAAGAGGGTACTTTTTGAATGTGGCCAAGGAACTTAAGGCCATAAAAAACAACAAAATGGAGTACATAACCGTGCAAGATTGTGTGGACCAAATCAATGATAGTGTGGACCAACTTAACCAAGCCATCAAAGAACTACATTTGTTAAACCAGCATGGCTCCACCATCAATGATGACATGTTGTGGCACATAAGCAATGTTGAGACATGGGTGAGCACTGCCTTAACAGATGCTAGTACTTGTGTGTACTCATTCCCTGGTCATAGAATGAGTAAGAGAGCAGCTGCAATTAAGGTTAAGGCCATGAATGTGGCACAAGTTACTAGTAATGCACTTGCCATATTCCATAGATATGCATCTAGATACCGGCAACAAGTAGCAGCTAGAACCCCCATGAAAACCTAG 654 0.4235 MAQFNFTLLSIFLSLLFLNFAAPVEPSRHHNSQTMSYIKSSCDGTLYPKLCIRYLAQYAKSTINGPQNLAQYALSVSLSRAQNTRGYFLNVAKELKAIKNNKMEYITVQDCVDQINDSVDQLNQAIKELHLLNQHGSTINDDMLWHISNVETWVSTALTDASTCVYSFPGHRMSKRAAAIKVKAMNVAQVTSNALAIFHRYASRYRQQVAARTPMKT* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0894 217 PANTHER BNAANNG18590D PROTEIN 2 205 - -
Apr10g0894 217 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 201 IPR035513 -
Apr10g0894 217 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 201 IPR035513 -
Apr10g0894 217 CDD PMEI-like_3 40 203 - -
Apr10g0894 217 PANTHER PECTINESTERASE INHIBITOR-LIKE 2 205 - -
Apr10g0894 217 Pfam Plant invertase/pectin methylesterase inhibitor 37 197 IPR006501 GO:0004857
Apr10g0894 217 Coils Coil 112 132 - -
Apr10g0894 217 SMART PMEI_2 33 197 IPR006501 GO:0004857
Apr10g0894 217 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 201 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0894 Apr-Chr10 21457921 21458574 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0894 24 198 Carbohydrate Esterase AT3G14310 23.164 1.84e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0894 - - gmx:100791798 331.643