Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0893 ATGGCACGATTTAACCTCACAATGGTGCTATTTATTTTCCTCTCTTTGTTTTCAATTATTGCCACCTTTGTTGAGCCAACCATGGCCAAGCATAACGATTCCCAAACAATGGCCTACATAAAGTCCTCTTGCAATGGCACCCTCTACCCAAAACTTTGCATTCGTTGCTTAGTTCAATATGCCAAATCCACCATAAATGGCCCACAACACTTAGCTCAATTTGCCTTGTCAGTGAGCCTCTCTAGAGCACTAAACACCAAAGGGTACTTGTTGAAAGTGGCCAAGGAACTTAGGGCCACAAAGAACAACAAAAGAGAGTACCTAATCGTGCAAGATTGCGTATACCAAATAAAGGATAGCGTGGACCAACTTAATCAAGCCATCAAAGAACTACAAATGTTGAACCAACATGGCTCCACCATCAATGATGACATGTTGTGGCACATAAGTAATGTTGAGACATGGGTGAGCACTGCCTTAACAGATGCTAGTACTTGTGTGTACTCATTCCCTGGTCATAGAATGAGTAAGAGAGCAGCTGCAATTAAGGTTAAGGCCATGAATGTGGCACAAGTTACTAGTAATGCACTTGCCATATTTCATAGATATGCATCTAGATACCAGCAAGCTGCTACTAGAATCTCCAAGCAATCCTAG 657 0.4201 MARFNLTMVLFIFLSLFSIIATFVEPTMAKHNDSQTMAYIKSSCNGTLYPKLCIRCLVQYAKSTINGPQHLAQFALSVSLSRALNTKGYLLKVAKELRATKNNKREYLIVQDCVYQIKDSVDQLNQAIKELQMLNQHGSTINDDMLWHISNVETWVSTALTDASTCVYSFPGHRMSKRAAAIKVKAMNVAQVTSNALAIFHRYASRYQQAATRISKQS* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0893 218 CDD PMEI-like_3 42 205 - -
Apr10g0893 218 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 203 IPR035513 -
Apr10g0893 218 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 203 IPR035513 -
Apr10g0893 218 Pfam Plant invertase/pectin methylesterase inhibitor 39 199 IPR006501 GO:0004857
Apr10g0893 218 SMART PMEI_2 35 199 IPR006501 GO:0004857
Apr10g0893 218 PANTHER BNAANNG18590D PROTEIN 3 207 - -
Apr10g0893 218 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 203 IPR006501 GO:0004857
Apr10g0893 218 Coils Coil 117 137 - -
Apr10g0893 218 PANTHER PECTINESTERASE INHIBITOR-LIKE 3 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0893 Apr-Chr10 21454206 21454862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0893 29 199 Carbohydrate Esterase AT3G14310 23.596 1.12e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0893 - - gmx:100791798 336.65