Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0891 ATGGCCACCACCACCTTTTGCCTCCAACAAATGGAGGTGCTTCAAATGGCCCAAATCCGTATTTCAGAAGCCAAGAGTTGGGTTAGCAATAACTCTGTGAGATTGCATGGCTTTGGAAGCTTAAGCCTTGACCAAACAAGTAATAGTGTGCCTTTAAGAGATTGTGCCAAACTCTATGAGGAGAGTGAGTCTCGGCTCTCTCACATGATGTCTGAAGAGAGTAGTTACACCAAAGAAGATGCACTTACATGGGTTAGTGCTGTGATGACAAACCATAGGGCTTGTTTGGATGGTTTGCAAGAAAAAGGGTATGTTGAAGCCGATCATGTTTTGGATAGAAACTTGACCATGTTGCTTGGGGAAGCTCTTGTTTTGTATTCAAAAAGCAAAGGCAAAGGACCAGCTGAGGGAACGATATCCAAATCAAGTGGTGGTCTTTTAGAATCATGGAGTACAGAAAGCTATAAGGCAGATTTGACAGTGGCACAGGATGGTTCAGGGACCCACAAAACAATCCAAGAAGCGGTAAATGGACTAGCTGCAATGGGGCACAATCGTCCTGCGAGAGCAGTTATACATGTGAAATCAGGTGTCTACAATGAGAAGGTGCAAATTGGATTGAACAATGTGATGTTTGTAGGAGATGGCATAGACAAAACAATTATCACTGGCAACCGAAATGTTGCCCAAGGCTCTTCCACTCTGAGCTCAGCCACATTTGATGTATCAGGGGATGGATTTTGGGCCAGAGATATGACAATTGAGAACACAGCAGGCCCAGAAAAGCACCAAGCGGTGGCACTTAAGGTTAGTTCAGACTTATCAGTCTTCTATAGATGCAGCATCAAAGGCTACCAAGACACACTTTATGTGCTTTCAAATCGCCAATTCTACCGTGATTGTTACATATATGGCACTGTAGATTTCATATTTGGTGATGCCATAGTGGTGTTACAAAATTGTGACATCTTTGTGAGGAAACCAATGAGCCATCAATCCAACTTCATCACAGCACAAGGAAGAGACGATCCAAACAAACCCACTGGAATTTCAATCCAAAATAGCAGGGTTAGGCCTACATCTGAGTTTGTCTCATTTAAGAATTCTTACAACACATTCTTGGGTAGGCCTTGGAAGAAGTATTCAAGGACAGTGTATCTTAAAACTGACTTAGATGGGCTGATTCACCCAAAAGGGTGGAGTGAATGGGATGGAAATTTTGCACTCTCAACTTTGTACTATGGAGAGTATATGAACACTGGTAGTGGTGCCTCTACTCAAAATAGAGTGAATTGGCCTGGTTTTCATGTGCTGAGTGCTAGTGAGGCCTCACCCTTCACAGTGAACCAGTTTTTGCAAGGAGAAAGTTGGATTCAAGCTACTGGGGTGCCATTTTGGGCTGGAATTTAA 1410 0.4319 MATTTFCLQQMEVLQMAQIRISEAKSWVSNNSVRLHGFGSLSLDQTSNSVPLRDCAKLYEESESRLSHMMSEESSYTKEDALTWVSAVMTNHRACLDGLQEKGYVEADHVLDRNLTMLLGEALVLYSKSKGKGPAEGTISKSSGGLLESWSTESYKADLTVAQDGSGTHKTIQEAVNGLAAMGHNRPARAVIHVKSGVYNEKVQIGLNNVMFVGDGIDKTIITGNRNVAQGSSTLSSATFDVSGDGFWARDMTIENTAGPEKHQAVALKVSSDLSVFYRCSIKGYQDTLYVLSNRQFYRDCYIYGTVDFIFGDAIVVLQNCDIFVRKPMSHQSNFITAQGRDDPNKPTGISIQNSRVRPTSEFVSFKNSYNTFLGRPWKKYSRTVYLKTDLDGLIHPKGWSEWDGNFALSTLYYGEYMNTGSGASTQNRVNWPGFHVLSASEASPFTVNQFLQGESWIQATGVPFWAGI* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0891 469 SUPERFAMILY Pectin lyase-like 155 468 IPR011050 -
Apr10g0891 469 Pfam Plant invertase/pectin methylesterase inhibitor 44 120 IPR006501 GO:0004857
Apr10g0891 469 Gene3D - 152 469 IPR012334 -
Apr10g0891 469 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 13 107 IPR035513 -
Apr10g0891 469 Pfam Pectinesterase 158 455 IPR000070 GO:0030599|GO:0042545
Apr10g0891 469 CDD PMEI-like_4 20 129 - -
Apr10g0891 469 PANTHER PECTINESTERASE 2 468 - -
Apr10g0891 469 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 36-RELATED 2 468 - -
Apr10g0891 469 SMART PMEI_2 9 125 IPR006501 GO:0004857
Apr10g0891 469 ProSitePatterns Pectinesterase signature 2. 303 312 IPR033131 -
Apr10g0891 469 Gene3D Invertase/pectin methylesterase inhibitor family protein 5 128 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0891 Apr-Chr10 21437153 21440389 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0891 10 469 Carbohydrate Esterase AT3G60730 53.678 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0891 K01051 - gmx:100792852 764.607