Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0884 ATGCAATTCAAGCTCGGCGGGCGCGTGATCCGGGTCACCAAATGGATCTTCAGACGGGTCAGGATCCGACGCAGATACCATCGTTTGGGTGGTTCTAACTCTAACCCCATGGCGAAGCTTCTCACGTGGGCGCGCATGTTGAAGAGAGGAGCCAGACTCCTGTGCGAGAGGAAGGGGTCGGGTTATATTCCAATCGGGTCGGATCCGGATAGTGTTCCGGCCGTGCCAAAGGGGCATTTGGCAGTGTACGTGGAGGAGGAAGACGGCGCGTGTCAGCGCGTAGTAGTGCCGGTGATTTACTTCAACCACCCTTTGTTCAGTGATTTGTTGAAGGAAGCGGAGAAGGAGTTCGGGTTTGAGCAACAGGGTGCGTTCACAATTCCGTGCCGGTTCACTGAGTTTGAACGAGTCAAGACCCGAATTGCATCCGGGTCGGGTTTGCGGAGGAACCGGAGACGATTGGCGTGGCGGGTACAGTGTTGA 483 0.5611 MQFKLGGRVIRVTKWIFRRVRIRRRYHRLGGSNSNPMAKLLTWARMLKRGARLLCERKGSGYIPIGSDPDSVPAVPKGHLAVYVEEEDGACQRVVVPVIYFNHPLFSDLLKEAEKEFGFEQQGAFTIPCRFTEFERVKTRIASGSGLRRNRRRLAWRVQC* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0884 160 PANTHER SMALL AUXIN-UP RNA-RELATED 3 150 - -
Apr10g0884 160 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 150 IPR003676 GO:0009733
Apr10g0884 160 Pfam Auxin responsive protein 43 138 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0884 Apr-Chr10 21360911 21374829 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0884 52 135 Calmodulin-binding Proteins AT5G20810 44.048 1.00e-15 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0884 K14488 - gmx:100808164 214.542