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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Apr10g0882
ATGTCCGCTTCATCCACTTCCTTTTCACCGGACCAACACCTCTCTCCCTCAGACCAGCTCTGCTATGTTCATTGCAATTTCTGTGACACTGTCCTCGCTGTGAGTGTTCCTTGCACCAGTTTGTTCAAGACTGTCACAGTGAGGTGTGGCCATTGCACCAACCTTCTCTCAGTCAACATGCGTGGACTACTTCTTCCTGCTGCTAATCAGCTTCACCTTGGCCATTCCTTCTTCACTCCTCAAAATCTTTTGGAGGAGATTCGAAATGCGCCTTCAACAAACATGATGATGAATCAGCTCCCTAACCCTAATGATTTGGTCATGAGCACCATGAGAGGAGGACCTGAAGAAACCCCTAAGCCACCATCAGCTAATAGACCTCCAGAGAAGAGACAGAGAGTGCCATCTGCTTACAACCGCTTCATCAAGGATGAGATCCAACGAATCAAAGCTGGGAATCCTGATATAAGCCACAGAGAGGCCTTTAGTGCAGCTGCAAAGAATTGGGCCCATTTTCCACACATTCATTTCGGACTTATGCCTGATCATCAACCCGTGAAGAAAGCTAATGAAGCAGAGGACGTGCTCATGAAAGATGGGTTTTTCGCACCGGCTAATGTAGGTGTCTCTCCCTACTAG
639
0.4773
MSASSTSFSPDQHLSPSDQLCYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRGLLLPAANQLHLGHSFFTPQNLLEEIRNAPSTNMMMNQLPNPNDLVMSTMRGGPEETPKPPSANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANEAEDVLMKDGFFAPANVGVSPY*
213
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Apr10g0882
212
Gene3D
High mobility group box domain
116
190
IPR036910
-
Apr10g0882
212
SUPERFAMILY
HMG-box
120
173
IPR036910
-
Apr10g0882
212
MobiDBLite
consensus disorder prediction
109
134
-
-
Apr10g0882
212
PANTHER
PROTEIN YABBY 6-RELATED
1
210
IPR006780
GO:0007275
Apr10g0882
212
Pfam
YABBY protein
16
179
IPR006780
GO:0007275
Apr10g0882
212
PANTHER
PROTEIN YABBY 4
1
210
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Apr10g0882
Apr-Chr10
21336012
21339281
Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Apr10g0882
27
210
C2C2-YABBY Transcription Factor Family
AT4G00180
62.679
5.04e-68
206
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
C2C2-YABBY
Apr10g0882
YABBY
6.9e-74
CL0114
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Apr10g0882
K25796
-
gmx:100781267
434.106
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