Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0880 ATGTCAATGATCACAATGCTGTTACCATTCGTTCTGTGTCTTATTCTCCCACCCTTGATTTTCTTCTTCATCATCATCGAAAACCGCCGAACCTTCAAGAACCCACCCCTTCCACCTGGTCCTAAAGGCCTTCCAATACTAGGAAATCTACATCAATTGGATAACTCTACCCTTTACTTGCAGCTATTGAAACTGTCAAAGAAATATGGTCCTCTGTTTTCCCTTCAACTTGGTCTAAGGCAAGCTATTGTTGTTTCCTCACCTAAATTAGCCAAAGAGGTACTTAAAAAACATGACCTTGTGTTTTGTGACAGACCTAAATTACTTGCCCAACAAAAATTGTCCTATAATGGGTTAGAGATTATATTTTCCCCATACAATGATTATTGGAGAGAAATTAGAAAAATTTGTGTTGTTCATATCTTTAGCTCCAAGCGTGTCTCTAACTTCTCTTCCATAAGAAAGTCTGAGGTGAAGCAAGTGATTGAAAAGATATCTAAGCATGCTTCTTCTTCAGTTGTTACAAACTTGAGTAAGTTGATGATGTCTCTCTCAAGCTCTATAGTATGTAGAATTGCTTTTGGGAGAAGGTACGAGGATGAAGGAAGTGAAACGACTAGGTTTCATGGGTTGCTCAATGAGTTTCAAGCCATGATTGCTACCTTCTTTATTTCTGATTATATTCCATTCACCAGTTGGATTGATAAATTAAAAGGATTACACATACGTCTCGAACGAATTTTCAAGGAGTTTGATAAGATTTACCAAGAGGTCATCGAGGAACACATGGATCCAAATAGACAGCACAAGGAGGAACAAGATATAGTTGATGTCTTGCTTCAAGTAAAGAAAGAGGGTTCGCTTTCAATTGATCTCACCTATGATCACATCAAAGGGGTCCTCATGGACATGTTTGTGGCAGCAACAGATACCACGGCAGCGACATCAGTTTGGGCTATGACTGCCCTAATAAAAAACCCGAGAGTAATGAAGAAAGTACAAGAAGAAATTAGAAGCATGGGGGGTCAAAAAGATTTGTTAGATGAAGATGACATTAAAAAGTGTCCCTACTTCAAGGCAATGATAAAAGAGACATTAAGATTGCACCCACCAGGTCCACTACTGGTCCCAAGAGAAGCAAATAAAGAATGCATTATAGATGGCTACCGAATTCCTGCCAAGACTATTGTTTATGTAAATGCTGGAAGTATTCATAGGGACCCTGAAGCTTGGAAAAACCCCGAAGAGTTTTATCCTGAAAGATTCTTAGACAGTGCTATAGATTTTCATGGGCAAGATTTTGAGCTAATTCCTTTTGGAGCAGGTCGTAGAATTTGTCCTGGTTTGCCTATGGCAATTGCCACATTGGAACTGATTCTTGCTAATCTTCTTCATTCCTTTGATTGGGAATTGCCAAAAGGAATGGTAAAGGAAGATATTGACACTGAAATGTCGCTAGGAATTACCCACCACAAGAAAAATCATCTTTGCCTTTGTGCCAAGACCAGACCTATGTGTAACTAA 1524 0.3904 MSMITMLLPFVLCLILPPLIFFFIIIENRRTFKNPPLPPGPKGLPILGNLHQLDNSTLYLQLLKLSKKYGPLFSLQLGLRQAIVVSSPKLAKEVLKKHDLVFCDRPKLLAQQKLSYNGLEIIFSPYNDYWREIRKICVVHIFSSKRVSNFSSIRKSEVKQVIEKISKHASSSVVTNLSKLMMSLSSSIVCRIAFGRRYEDEGSETTRFHGLLNEFQAMIATFFISDYIPFTSWIDKLKGLHIRLERIFKEFDKIYQEVIEEHMDPNRQHKEEQDIVDVLLQVKKEGSLSIDLTYDHIKGVLMDMFVAATDTTAATSVWAMTALIKNPRVMKKVQEEIRSMGGQKDLLDEDDIKKCPYFKAMIKETLRLHPPGPLLVPREANKECIIDGYRIPAKTIVYVNAGSIHRDPEAWKNPEEFYPERFLDSAIDFHGQDFELIPFGAGRRICPGLPMAIATLELILANLLHSFDWELPKGMVKEDIDTEMSLGITHHKKNHLCLCAKTRPMCN* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0880 507 SUPERFAMILY Cytochrome P450 38 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0880 507 Pfam Cytochrome P450 38 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0880 507 PANTHER CYTOCHROME P450 71B11-RELATED 9 502 - -
Apr10g0880 507 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0880 507 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0880 507 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0880 507 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0880 507 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 9 502 - -
Apr10g0880 507 Gene3D Cytochrome P450 24 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0880 507 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0880 507 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0880 507 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0880 507 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0880 507 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0880 507 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0880 507 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0880 507 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0880 507 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0880 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0880 Apr-Chr10 21301185 21303897 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0880 6 499 Cytochrome P450 AT4G31500 46.278 3.47e-166 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0880 - - gmx:100778293 762.681