Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0876 ATGAAGGCCATGCCCTTGCCTTTTGAGGAATTTCAAGGGAAGGGAGTGTTGGATTTTGCTTCAGCCTCAGATTCATTTTCACTGCTTTTGCATCATCCACAAAAGTGGACCATAGACAAAGAGGATTATTGCTATGTGGGCACTGAGTGCACCTCACTTCTTGACTCCAGAAGAAGCCCAAGCTCTCTTACTTGTTCGTCTACAATGTCCTCTTCTCTTGGCAGCAACAACAGCAATAGCAAGGGTGGTAGTGGTTCAGCCAACAACACCACTGTTTCAGCCCCTACAGTCTCTGAGAACCCTCCTCAGGAATCCTTGGAAACCAGCCCAGAAAAATGTGGGATGAGAATGGAGGACTGGGAGGGTCAAGATCAATCTATTCTCAGGTTAATCATGGGTGATGTTGAAGACCCTTCTGCAGGATTGAACAAGCTCTTACAAAGCAGTGGCTGTGCCTCTCAAAGTGTTGATTTCAATGCAGGTTTTGGTGTTGTGGATCAAGGGTTGAATAATATGCAGCAAGAGTTTGGAGTGGTAGATGAGAAACCTCAAGTCATCAATCCTCAGTTTATGTTGAACCAGAATCAAGTTCAGTTCTCTGAAAATCCCTCTTTCTTTGTACCATTGATGTACCCTCCAGTGCAAGAGCAACAAGTGTTCTCTCAGCATCAAGCAAAACGCCCCCTTTTTGATCCTGTTGGGCACAATTATCAGGTTCCAAGGTTGCCCCTTTTGGATTCAGGGCAAGAACTGTTTGGTAGGAGGCAACAAACACAGCTTCCATTGTTTCCTCATCATATCCAACCATCACAACAACAACAAACATTGGTTATGCCATCTGCTAAACCGCAGAAGGTGAGTTCCACCGGAGAAGATTCAAACCACCAGCTTCAGCAGGCCATCTTTGATCAGTTATACAAAACTGCTGAGCTGATAGAAGCTGGTAATCCGGTTCATGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCACCAATTGGTAAGCCTTTTCAGAGGGCTGCTTTCTACATGAAGGAAGCCTTGATGTCACTGCTTCATTCAAATGTTCAAAATCTTTTGGCTTTCTCACCCATTAGCTTCATATTCAAAATTGGAGCTTACAAGTCCTTTTCTGAGATATCACCTGTTCTTCAGTTTGCCAATTTTACCTGTAACCAAGCCCTCATTGAAGCTGTGGAGAGGTTTGATCGAATTCACATTATCGATTTTGATATCGGGTTTGGAGTGCAGTGGTCATCATTTATGCAAGAGCTTGCCTTGAGAAATAGTGGTGCCCCTTCACTCAAAGTTACTGCTGTTGTGTCACCCTCAACCTGCGATGAGGTTGAGCTCAATTTCACCCGAGAGAATTTGAATCAACATGCCAAAGACATCAATATGTCGTTCGAGCTCAATGTTTTGAGCATTGAGTCATTTAATTCCCCTTCTTGTCCCCTGCTTGGTCAGTTCTTTGACAATGAGGCAATTGCTGTGAATATGCCAGTTTCATGTTTCACAAATTATCCATCCTTGTTTCCTTCAGTTCTCCACTTTGTAAAGCAGCTTAGGCCAAAAGTGGTGGTCACTTTGGATAGAAATTGTGACCGAATTGACGTATCACTTCCCATCAATGTAGTCCATGTTCTCCAATGTTATTCAGCCTTGCTCGAATCACTCGACGCAGTAAATGTGAATCTTGACGTCCTCCAAAAGATTGAGAGGCATTTCATCCAACCAGCCATCAAGAAAATTATACTTGGCCACCAGCATTCTCAAGAAAAATTGCCTCCATGGAGGAACCTCTTTCTACAATCTGGATTCTCTCCATTCACATTTACTAACGTCACGGAAGCTCAAGCTGAGTGTTTAGTTCAGAGGGCACCTGTAAGGGGATTTCATGTGGAGAGAAAGCCTTCATCTCTTATTCTATGCTGGCAGCGAAAGGAACTTATCTCAGTTTCAACTTGGAGATGCTGA 1980 0.4394 MKAMPLPFEEFQGKGVLDFASASDSFSLLLHHPQKWTIDKEDYCYVGTECTSLLDSRRSPSSLTCSSTMSSSLGSNNSNSKGGSGSANNTTVSAPTVSENPPQESLETSPEKCGMRMEDWEGQDQSILRLIMGDVEDPSAGLNKLLQSSGCASQSVDFNAGFGVVDQGLNNMQQEFGVVDEKPQVINPQFMLNQNQVQFSENPSFFVPLMYPPVQEQQVFSQHQAKRPLFDPVGHNYQVPRLPLLDSGQELFGRRQQTQLPLFPHHIQPSQQQQTLVMPSAKPQKVSSTGEDSNHQLQQAIFDQLYKTAELIEAGNPVHAQGILARLNHQLSPIGKPFQRAAFYMKEALMSLLHSNVQNLLAFSPISFIFKIGAYKSFSEISPVLQFANFTCNQALIEAVERFDRIHIIDFDIGFGVQWSSFMQELALRNSGAPSLKVTAVVSPSTCDEVELNFTRENLNQHAKDINMSFELNVLSIESFNSPSCPLLGQFFDNEAIAVNMPVSCFTNYPSLFPSVLHFVKQLRPKVVVTLDRNCDRIDVSLPINVVHVLQCYSALLESLDAVNVNLDVLQKIERHFIQPAIKKIILGHQHSQEKLPPWRNLFLQSGFSPFTFTNVTEAQAECLVQRAPVRGFHVERKPSSLILCWQRKELISVSTWRC* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0876 659 PANTHER GRAS FAMILY TRANSCRIPTION REGULATOR 174 658 - -
Apr10g0876 659 PANTHER GRAS FAMILY TRANSCRIPTION REGULATOR 7 161 - -
Apr10g0876 659 MobiDBLite consensus disorder prediction 55 112 - -
Apr10g0876 659 Pfam GRAS domain family 303 658 IPR005202 -
Apr10g0876 659 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 161 IPR005202 -
Apr10g0876 659 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 174 658 IPR005202 -
Apr10g0876 659 MobiDBLite consensus disorder prediction 55 107 - -
Apr10g0876 659 ProSiteProfiles GRAS family profile. 292 658 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0876 Apr-Chr10 21237445 21242026 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0876 300 659 GRAS Transcription Factor Family AT4G00150 55.372 1.82e-127 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr10g0876 GRAS 2.6e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0876 - - gmx:100801785 1003.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0059 10 1390767 1400316 Apr10g0876 10 21237445 21242026 PCT