Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0875 ATGAAGGCCATGCCCTTTCCTTTTGAAGAGTTTCAAGGGAAGGGAGTGTTGGATTTCTCTTCAGCCTCAGATTCATTTTCACTGCTTTTGCATAATCCACAAAAGTGGACCAAAGACAAAGAAGATTATTGCTATGTGGGCACTGAGCCCACCTCAGTTCTTGACTCCAGAAGAAGCCCAAACTCTTCCACTATGTCCTCTTCCCTTGGTAGCAGCAACACCATAAGCAAAGGTGGAAGTGGTGGTTCAACCAATAACACCACTGGTTACACCCCAACTGTGTCTCAGAACCCTCGTCAACCAGCATTGGAAACCACCATAGAAAAATGTGGTATGAGAATGGAGGATTGGGAGGCTCAAGATCAATCTATTATGAGGTTAATCATGGGTGATGTTGAAGACCATTCTGGAGGATTGAGCAAGCTCTTCCAGAACAATGGATGTGGGTCTCAAAGTGTTGATTTCAATGGAGGTTTTGGTGTTGTGGATCAAGGGTTGAACATGGTAAGTTTTATTGACCCATCTGTGCCAGGGAATTACCCTGGTTTCCCTTTCATGGCTGAGAATTATCAGGTTCCAAGGTTGCCCCTTTTGGATTCAGGGCAAGAGCTGTTTGGTAGGAGGCAGCAAATGCAGCTTCCATTGTTTCCTCATCATGTGCAACCACAGGTTGTGCCATCTGCTAAACAGCAGAAGGTGAGTTCCACCGGAGAAGATTCAAGCCACCAGCTTCAGCAGGCCATATTTGATCAGTTATACAAAACTGCTGAGCTGATAGAAGCTGGTAATCCGGTTCATGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCACCAATTGGTAAGCCTTTCCAAAGGGCTGCTTTCTACATGAAGGAGGCCTTGATGTCATTGCTTCATTCAAATGTTCAAAATCTTTTGGCTTTCTCACCCATTAGTTTCGTATTCAAAATTGGAGCTTATATGTCCTTTTCTGAGATATCACCTGTTCTTCAGTTTTCCAACTTTACTAGTAATCAAGCCCTCATTGAAGCTGTGGAAAGGTTTGATCGAATTCACATTATCGATTTTGATATCGGGTTTGGAGTGCAATGGTCTTCTCTTATGCAAGAGCTTGCTCTGAGGAGTAGTGGTGTGCCTTCACTCAAAATCACTGCCATTGTATCACCCTCCACTTGTGATGAGGTTGAGCTCAATGTCACCCAAGAAAACTTGAATCAATACGCGAAAGACATCAACATGGCGTTCGAGCTCAATGTTTTGAGCATTGAATCATTGAACACTCCTTCGTGTCCACTCTCTGGACAGTTCTATGAGAACGAGGCTATTGCTGTTAACATGCCACTTTCTTGTTTCACAAACTACCCATCATTGTTCCCTTCTGTCCTTCGCTTTGTAAAGCAGCTTAGGCCAAAAGTGGTGGTCACTTTGGATAGAAATTGCGATCGATTCGACGTACCATTTGCCACCAATGTAGTCCATGCTCTTCATTGTTACTCAGCCTTACTTGAATCACTTGATGCTGTAAATGTGAACCTTGATGTCCTTCAAAAGATTGAGAAACATTTTGTTCTACCAGCCATTAAGAAAATCATAATTGGTCACCAACATTCGCAGGAAAAGTTACCTCCTTGGAGGAACATGTTTCTTCAATATGGATTCTCTCCATCCACATTTAGTAACTCCACAGAAACTCAAGCTGAGTGTTTAGTGCAAAGGGCACCTATAAGGGGTTTTCAATTGGAGAGAAAGCACTCATCTCTTGTTCTATGCTGGCAGAGGAAAGAACTTGTCACAGTTTCAACTTGGAGATGCTGA 1821 0.4349 MKAMPFPFEEFQGKGVLDFSSASDSFSLLLHNPQKWTKDKEDYCYVGTEPTSVLDSRRSPNSSTMSSSLGSSNTISKGGSGGSTNNTTGYTPTVSQNPRQPALETTIEKCGMRMEDWEAQDQSIMRLIMGDVEDHSGGLSKLFQNNGCGSQSVDFNGGFGVVDQGLNMVSFIDPSVPGNYPGFPFMAENYQVPRLPLLDSGQELFGRRQQMQLPLFPHHVQPQVVPSAKQQKVSSTGEDSSHQLQQAIFDQLYKTAELIEAGNPVHAQGILARLNHQLSPIGKPFQRAAFYMKEALMSLLHSNVQNLLAFSPISFVFKIGAYMSFSEISPVLQFSNFTSNQALIEAVERFDRIHIIDFDIGFGVQWSSLMQELALRSSGVPSLKITAIVSPSTCDEVELNVTQENLNQYAKDINMAFELNVLSIESLNTPSCPLSGQFYENEAIAVNMPLSCFTNYPSLFPSVLRFVKQLRPKVVVTLDRNCDRFDVPFATNVVHALHCYSALLESLDAVNVNLDVLQKIEKHFVLPAIKKIIIGHQHSQEKLPPWRNMFLQYGFSPSTFSNSTETQAECLVQRAPIRGFQLERKHSSLVLCWQRKELVTVSTWRC* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0875 606 MobiDBLite consensus disorder prediction 51 101 - -
Apr10g0875 606 MobiDBLite consensus disorder prediction 52 101 - -
Apr10g0875 606 Pfam GRAS domain family 250 605 IPR005202 -
Apr10g0875 606 ProSiteProfiles GRAS family profile. 239 605 IPR005202 -
Apr10g0875 606 PANTHER GRAS FAMILY TRANSCRIPTION REGULATOR 7 182 - -
Apr10g0875 606 PANTHER GRAS FAMILY TRANSCRIPTION REGULATOR 228 605 - -
Apr10g0875 606 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 228 605 IPR005202 -
Apr10g0875 606 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 182 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0875 Apr-Chr10 21191847 21195083 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0875 4 606 GRAS Transcription Factor Family AT4G00150 45.219 3.67e-144 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr10g0875 GRAS 2.3e-93 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0875 - - pvu:PHAVU_010G072700g 920.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0875 10 21191847 21195083 Apr10g0875 10 21191847 21195083 ECH