Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0857 ATGGGGTGTTTCATGGTCTTGAAGAGCAAGAAGAAGAAGACGGATCAAATTTTGCACTCAAAAAGCGTCTGCCATAATTGTCATGCACCTATAATACTGCCTGAACCTCAATCTCGTACTCGTTTATTAAAATCTGCACCTCCTAGTTTTAGGACTAGAGCGAAACTCGTTCACCCCATTAATAAAGTTAACAACAACATAACACGGGCATTATCTGCTCCATCAGCTCTTGATGTAGCAGATCAAGAGGCTCTGGCCTCAGTTGAGTATGAGGAACGAGACGAGTCAAATTACCAAACAGGCTCAATGAAGGAGCAGCATTCATTTAGTCCACAACCATTACCTCTTCCATCTGGTCAGGGTGGTGGTGCATTGAAGGTTACTGGCAGCTTTAAGTCAAGGACAGCTAGTGGTCCTTTATATGCTTCTGGACTAATTCCTGATTCAGCAGAACAACATGGTTTGGCCTTATTTGAGTATGAGGAACAAGAAGAGTCAAAACACCGAGTTGGATCGCTGAACGAGCAACGTTCATCTAATCCACAACCTTTGCCTCTCCCATCTCATAAGGGTGGTGGTGGTGCATTGAAGGCTTCGGGGATGGCTAGTGGTCTTCTACATGCTTCTGGACCTTTGCCACTTCCACCAACTGGACTGCTTAGAAACTTTCCATATGAGGAAATTGCTACTGCTTGCCACAACTTCTCTTCAGATAGATGCATGTCAGAATGTCTTTCTTCGACAATATATAAAGCTTCATTTGGTGATGATGCTTCGAGTTCAAAGAAGTTTGAAGCCACTGTGACGCGCCTTCAGTCGTCAACTCAGGGCTTGAAGGAATTCATAAATGAGGTTAATACTCTTGCATCTTTGCAACATGCAAACCTCTGTAAATTGCTCGGATTTCATGCACGTGATGGCTCTGAACCACGGATGTTGGTTTATGAGAGGCTATACCATGGAAGCTTGGACCGCCTGTTGTTTGGGAGATCTGATGGCCCTTCAATTGATTGGAACACACGAATGAAAATTGCCATATGCGCTGCACAAGGTCTTACTTTCTTGCATGAAGAAGGGCCTTTCCAGGCAATGTATAATGAATTTTCAGCAGCCAACATACAGATTGACAAGGATTTCAGTGCAAAGCTTTCTGGATACGGTTGCGCTGGACATGTTCCTGAAGAAGAGATTTCAAGCAATTCATCTGCTGTTGGAAACCTATCCATGGAGACATTGGAAAGAGGAATTCTTACTCCAAAAAGCAATGTATGGAGTTTTGGGATTACCCTTTTGGAACTACTTACTGGCAGAAAGAATCTTGATAGCCATCACCTCAAGGAAGAGAGGAACTTAGTCAAGTGGAGCCGGCCTTTCCTGGCTGACGATTTTCGACTGTCACTGATTATGGATCCTAAACTTAAAGGTCGTTTTCCTACCAAAGCAACGAGAGCAGTAGCTGACATTGCACAAAGATGCCTCCAAAAGGAGCCATCAGAAAGACCAACCATGAGAACCATTGTTGGGCATCTCAAAATGATACAAGATATGAAGTACTCTTGTTGGTTCCCTCTACAAGAGCCAGCACCTATGTCTTCAAAACAAATTTCAAGATCACCAAGTCTTGATGGCATCACATGTCATGCAGGTAAATCGAGTCTCTCTCCATCGCCACCATCCTTAGCCAGACCATCTGATTCGCCTCCAAGATGGTCTGGCATGCCCACACTGCATCCTCCTCTCCGCGCCTGTTCCTCAACACTATCTATGGAGGAGCATGGTAGACAGGAAAGCAGGAAGTCATCATCCTCAGTGTGTAGGAGAGCAAGTATTGAAGGATATTGA 1842 0.4441 MGCFMVLKSKKKKTDQILHSKSVCHNCHAPIILPEPQSRTRLLKSAPPSFRTRAKLVHPINKVNNNITRALSAPSALDVADQEALASVEYEERDESNYQTGSMKEQHSFSPQPLPLPSGQGGGALKVTGSFKSRTASGPLYASGLIPDSAEQHGLALFEYEEQEESKHRVGSLNEQRSSNPQPLPLPSHKGGGGALKASGMASGLLHASGPLPLPPTGLLRNFPYEEIATACHNFSSDRCMSECLSSTIYKASFGDDASSSKKFEATVTRLQSSTQGLKEFINEVNTLASLQHANLCKLLGFHARDGSEPRMLVYERLYHGSLDRLLFGRSDGPSIDWNTRMKIAICAAQGLTFLHEEGPFQAMYNEFSAANIQIDKDFSAKLSGYGCAGHVPEEEISSNSSAVGNLSMETLERGILTPKSNVWSFGITLLELLTGRKNLDSHHLKEERNLVKWSRPFLADDFRLSLIMDPKLKGRFPTKATRAVADIAQRCLQKEPSERPTMRTIVGHLKMIQDMKYSCWFPLQEPAPMSSKQISRSPSLDGITCHAGKSSLSPSPPSLARPSDSPPRWSGMPTLHPPLRACSSTLSMEEHGRQESRKSSSSVCRRASIEGY* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0857 613 MobiDBLite consensus disorder prediction 101 115 - -
Apr10g0857 613 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 47 606 - -
Apr10g0857 613 MobiDBLite consensus disorder prediction 89 130 - -
Apr10g0857 613 PANTHER OS01G0588500 PROTEIN-RELATED 47 606 - -
Apr10g0857 613 Gene3D Phosphorylase Kinase; domain 1 216 316 - -
Apr10g0857 613 ProSiteProfiles Protein kinase domain profile. 235 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0857 613 MobiDBLite consensus disorder prediction 161 198 - -
Apr10g0857 613 SUPERFAMILY Protein kinase-like (PK-like) 214 524 IPR011009 -
Apr10g0857 613 MobiDBLite consensus disorder prediction 531 613 - -
Apr10g0857 613 Gene3D Transferase(Phosphotransferase) domain 1 318 521 - -
Apr10g0857 613 MobiDBLite consensus disorder prediction 531 559 - -
Apr10g0857 613 Pfam Protein tyrosine and serine/threonine kinase 248 510 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0857 Apr-Chr10 20904007 20908351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0857 210 514 Receptor kinase-like Gene Family AT4G02010 37.299 7.65e-54 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Apr10g0857 PK_Tyr_Ser-Thr 1.8e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0857 - - aprc:113849641 1189.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0857 10 20904007 20908351 Apr10g0857 10 20904007 20908351 ECH
Apr4g2137 4 30466203 30471195 Apr10g0857 10 20904007 20908351 PCT