Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0846 ATGTACAAGGGGAGATTAGGAGGCAAAGCTCAGCTTGGATATGTTGAAACTGACCCATCTGGTCGATATGGACGTTTCAGGGATATTCTAGGCAAAGGAGCAGTGAAGGTAGTGTATAGGGCATTTGATGAGGTTCTAGGAATAGAAGTGGCTTGGAACCAGGTCAATCTTGGTGATGTGTTTCATTCACCAGACCAACTTCAGCGCCTTTATTCAGAGGTTCATCTCCTTAAGAACTTGGAACATGAATCAATCATGGCCTTCCATGATTCTTGGATCGATGCCCATTGTAGAACCTTCAACTTCATCACCGAATTGTTCACCTCAGGCACCTTAAGAGAGTACAGAAAAAAGTACCAGCGAGTAGATATCAGAGCAGTGAAGAATTGGGCACGCCAGATTCTAAGTGGTTTGGAGTATTTGCATAGTCATGATCCTCCTGTGATACACAGAGACCTAAAGTGTGATAATATATTCATCAATGGCCATCTGGGGCAGGTCAAGATTGGTGACTTAGGCCTTGCAGCCATTCTTCGTGGCTCCCAACATGCCCACAGTGTCATTGGGACACCAGAATTTATGGCACCAGAATTGTATGAAGAGGAATACAATGAGCTGGTTGACGCTTACTCCTTTGGGATGTGTATGATAGAAATGTTTACTTCTGAATTCCCATACAGCGAGTGCTCCAACCCTGCTCAAATATACAAGAAAGTTACTTCGGGGAAGCTGCCAGATGCATTTTACAGAATCCATGACAAGGAAGCCCAGAGATTTGTTGGAAAGTGTTTGGCAAATGTCTCAGAGAGGTTGTCAGCAAAAGAGCTCTTGATAGACCCATTTTTGGCCACGGACCAACTTGTCTCGCCACTGCCTAGCCCAACCTTACCCAAGAAAAATGGGTCCATCAATTTCACTACATTATTTGCCAATGAGCAACCTCCAATGAGGGACCAAGCAAAGGACACCCACATGACCATCACTGGGTCAATAGATGAAGATGACACAGTTTTCCTTAAAGTACAGATTCTTAACAAAAGTGGGGAAACAAGAAATATTTTCTTTCCATTTGATACCATAAACGACACTTCCATTGATGTGGCAATGGAAATGGTTAAAGAACTGGAAATTAGTGACTTGGAACCGTTGGAGATTGCTGAAATGATAGAGGAGGAGATATCAGGTTTAGTCCCAACAGGGAGAGATTGGGACACATCCAAATATCAAAGACAGCATAGTTTTAGGTATGAAGAAGAGGATGATGTCGCTAACCACCATCCTTTTTTCTCATCATCTTCTCCCTCTTCCTCCCATGGTTCCTACAAGAATAATTCCCACCTTCGTGGAAACCATTATCCGTTTGCTCAAGATTGGCCTCATGATGATCTATATATGAATGATGATGCAAGCTCTCAAAGCTCAATGAACTCCTCCAAGTGTTTCAATTTCCAGTGCTGCGACTCAAGCAATGGAGATGAGCATGTTCCTACTCCAGTAGTAGGAACAGAACCCTTTTGCTACTCTCCAAAAGCCAACAACAAGAGCACAAGATTCTGTCCTAGAAAAGAGGTGGTGTTTGAGAATGATTTCACCAAACAATTTTGCAACATGAGAATGGACTCTCACAGGTACCATGGATACCATAGGCTAACAAGGATTCATTCCTATGTTGATGTGAAGAGACAGCAAAATCAACGATCATTGATAGAAGAGATACACAAGAGGAGAATGTTCAAAACTGTTGGTGCCATTGAGAATATTGGGTTTCAGAATCCAGAAGGAGGTGCACGTTTTTCTTATTGA 1803 0.4265 MYKGRLGGKAQLGYVETDPSGRYGRFRDILGKGAVKVVYRAFDEVLGIEVAWNQVNLGDVFHSPDQLQRLYSEVHLLKNLEHESIMAFHDSWIDAHCRTFNFITELFTSGTLREYRKKYQRVDIRAVKNWARQILSGLEYLHSHDPPVIHRDLKCDNIFINGHLGQVKIGDLGLAAILRGSQHAHSVIGTPEFMAPELYEEEYNELVDAYSFGMCMIEMFTSEFPYSECSNPAQIYKKVTSGKLPDAFYRIHDKEAQRFVGKCLANVSERLSAKELLIDPFLATDQLVSPLPSPTLPKKNGSINFTTLFANEQPPMRDQAKDTHMTITGSIDEDDTVFLKVQILNKSGETRNIFFPFDTINDTSIDVAMEMVKELEISDLEPLEIAEMIEEEISGLVPTGRDWDTSKYQRQHSFRYEEEDDVANHHPFFSSSSPSSSHGSYKNNSHLRGNHYPFAQDWPHDDLYMNDDASSQSSMNSSKCFNFQCCDSSNGDEHVPTPVVGTEPFCYSPKANNKSTRFCPRKEVVFENDFTKQFCNMRMDSHRYHGYHRLTRIHSYVDVKRQQNQRSLIEEIHKRRMFKTVGAIENIGFQNPEGGARFSY* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0846 600 Gene3D Phosphorylase Kinase; domain 1 9 105 - -
Apr10g0846 600 CDD STKc_WNK 22 282 - -
Apr10g0846 600 Pfam Protein kinase domain 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0846 600 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 593 - -
Apr10g0846 600 SMART serkin_6 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0846 600 Gene3D Transferase(Phosphotransferase) domain 1 107 289 - -
Apr10g0846 600 SUPERFAMILY Protein kinase-like (PK-like) 26 283 IPR011009 -
Apr10g0846 600 PANTHER WNK KINASE 1 593 - -
Apr10g0846 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Apr10g0846 600 ProSiteProfiles Protein kinase domain profile. 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0846 Apr-Chr10 20768897 20774718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0846 12 421 MAP Kinase Kinase Kinase AT3G51630 68.281 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Apr10g0846 Pkinase 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0846 K08867 - gmx:100816187 981.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0846 10 20768897 20774718 Apr10g0846 10 20768897 20774718 ECH
Apr4g2131 4 30377575 30381770 Apr10g0846 10 20768897 20774718 PCT