Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0845 ATGTCCATCCACCCCACATCACAGAGACAACCAGAAACTAGAAAATATTCATTAGCTTCACAAACACACACACATACAGAACAAAGGAACACACGCACTCATACAAACACATTGAGTGAGTGTGTGAGAGAGAGGATGGGGAATTACAGGTTTAAGTTATCAGATATGATTCCAAATGCTTGGTTTTACAAGCTGAGGGACATGGGAAAAGTAAGAAAACAAACCACAACACCCTCAAAGAAAAAAATGCAATCTTCATCACCCTCAACCTCACAATCATCAAAACCAAAACAACCCCACCAACAATGCAACAACCCCAGAAAATCCTACTACTTCACAAGAGAACTTAACCCAAAAGTCCCACCCCACAATTCCCCTGAACCCCCAAGAAAATCATCATCAAACAAACGAAGAACCAAAAGAAGAACACCAGAACACTCTTCTTCATCACCATTTGATAGCTCCAACGAGTCAGAATTCCTAGACCCAGAATTCAGAACAGACCGTGTTCTTCCCACTGAGTCATTTGATGAAATGGTTTCCTTGTCCACCACTTCTTGTGCCTCTTGCAAGCACAACAACAACAACACCACCAAAGACATCATCATCAATGTGGACAACAACTCCATAGCAAGAAAAGATGATAAGCTTGATGGCTATTACAATGAATATGACACCATGTCAGAGCTTGAACTTCCTCCAATCATAACCAAACCACCCAAATTCAACGACTTGTTGTTAACCCACAAGAGAGAACCAAAACCCAGAAGGAGAATCTCAACATATGAAGAAAAAGGGTCCTTAAAGGTTAAAATTTTGAAGGAAGACACTGTATCAATGAAGGAACAGAGGAATGGTTCTATTAGAAGGTTCTCTGTGACTTCACCAGGTGTTAAGTTAAGGGTCCACTCACCCAGAATTGCAGGCATTAAAGTGCAGTCTCATGGCCGGAAAAGCGTCTCGTCGACGGTAAGTTCCGGCTCCCGGAGAAGCCTCTCCGATAGCTTTGCAATTGTGAAGTCTTCATTCAACCCACAAAAGGATTTTAGAGAGTCAATGGTGGAGATGATTGTGGAGAACAACATAAGGGCCTCTAAGGATTTGGAAGATCTACTTGCTTGCTACCTTTCTCTCAATTCAGATGAGTATCATGATCTCATCATCAAAGTGTTCAAGCAAATTTGGTTTGATTTGACTCAACCAAGGTAG 1209 0.416 MSIHPTSQRQPETRKYSLASQTHTHTEQRNTRTHTNTLSECVRERMGNYRFKLSDMIPNAWFYKLRDMGKVRKQTTTPSKKKMQSSSPSTSQSSKPKQPHQQCNNPRKSYYFTRELNPKVPPHNSPEPPRKSSSNKRRTKRRTPEHSSSSPFDSSNESEFLDPEFRTDRVLPTESFDEMVSLSTTSCASCKHNNNNTTKDIIINVDNNSIARKDDKLDGYYNEYDTMSELELPPIITKPPKFNDLLLTHKREPKPRRRISTYEEKGSLKVKILKEDTVSMKEQRNGSIRRFSVTSPGVKLRVHSPRIAGIKVQSHGRKSVSSTVSSGSRRSLSDSFAIVKSSFNPQKDFRESMVEMIVENNIRASKDLEDLLACYLSLNSDEYHDLIIKVFKQIWFDLTQPR* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0845 402 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 337 399 IPR006458 -
Apr10g0845 402 ProSiteProfiles OVATE domain profile. 338 397 IPR006458 -
Apr10g0845 402 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 48 400 IPR038933 GO:0045892
Apr10g0845 402 MobiDBLite consensus disorder prediction 78 111 - -
Apr10g0845 402 MobiDBLite consensus disorder prediction 72 163 - -
Apr10g0845 402 MobiDBLite consensus disorder prediction 1 37 - -
Apr10g0845 402 Pfam DNA-binding domain 46 87 IPR025830 GO:0003677
Apr10g0845 402 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 48 400 - -
Apr10g0845 402 Pfam Transcriptional repressor, ovate 342 398 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0845 Apr-Chr10 20749172 20750488 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Apr10g0845 Ovate 3.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0845 - - aprc:113850281 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0845 10 20749172 20750488 Apr10g0845 10 20749172 20750488 ECH