Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0842 ATGGAAGGAGCAAAAAAAGGCACCGTTACAGACACAAGAATAGAGAAAGACTCGTCGTTGCCAAACGACGAGGCAGTAACAGGTGTCGTTTTATTCGGGAAATACAAGCTGCTTAAGTTACTAGGCGTTGGCGCGTCCGCAAAGGTGTACCACGCGCGGAACGTCAACACTTCGCAGAGCGTGGCGGTGAAGGCCGTTAGCAAGCGCAAGGTAGAGAAAAACGGTTATGCGGCCCACGTCGAGCGCGAGGTTGCTATCATGCGCAGGCTGCGCCACCCGCACACCGTGAAGCTCTACGAGGTCCTCGCCACCAAGACGAAGATATACTTCGTCATGGAGTTCGCCGGCGGCGGAGAGCTCTACGACGTAGTCGCCGGCGAGGGACGCCTGACCGAGGAGCTCAGCCGGCGATACTTCCGGCAACTGATCGCCGCCGTGAAATATTGCCACTCCCGCGGCGTTTACCACCGCGACCTCAAACTGGACAACCTCCTCGTCGACGAAAACATGAACCTCAAGGTTTCGGATTTCGGGTTAAGCGCTTTGAAAAGCCAGATCCCAGTCGATGGAATGCTTCACACCGTCTGTGGGACCCCTGCTTACGTGGCACCTGAGATTCTCGCGAGAAAGGGTTACGATGGTGCGAAGGTGGATATCTGGTCATGCGGTGTCGTTTTGTTCGTGCTGAGCGCTGGATATTTGCCCTTCAATGATTACAATATTACGGTTTTGTACAGAAAAATATACAGAGGACAGTTCAGGTTCCCGAGATGGATATCGCCTGATCTTCAAAATCTCGTATCTAGGTTGTTAGACACGAATCCCGGGACGAGAATATCGTTAGATGAGATAATGCAAGACCAGTGGTTTAATCGGGGCGGGTATAATGACACGTTGACCCGGCCCAAGGAATTTGAATGGGAAGAGAACCGGGCTGTGAGTAAAAGTTTGAACGCGTTTCACTTGATAAGTTTCTCATCCGGGTTTGACATGTCGGGTTTGGTTACCGACCCGGAATATTTGGATTCCACGGAGCGGTTTGTTACAAGGGTAGTGCCGGAGAGCGTCACGGTAACGGTGGAGGAAGTGGCGGTGTCGGAAAAATTAACGGTGAAAAAGGAAGAGAGCGGTTGCGGAGTGAGGATAGAGGGGTTGGATGGTAATTTCGTGATTGTGGTCGGGGTTTACCGGTTAACGGATGAGGTGGTTATTGTTGAGGTGAAGAGAAGGGAAAGAAGAGAGGGAAGTGGGACACGGTTTTGGAAAGATGCATTGAGGCCACGGCTTCTTGCATTGGCTCAATAA 1305 0.5188 MEGAKKGTVTDTRIEKDSSLPNDEAVTGVVLFGKYKLLKLLGVGASAKVYHARNVNTSQSVAVKAVSKRKVEKNGYAAHVEREVAIMRRLRHPHTVKLYEVLATKTKIYFVMEFAGGGELYDVVAGEGRLTEELSRRYFRQLIAAVKYCHSRGVYHRDLKLDNLLVDENMNLKVSDFGLSALKSQIPVDGMLHTVCGTPAYVAPEILARKGYDGAKVDIWSCGVVLFVLSAGYLPFNDYNITVLYRKIYRGQFRFPRWISPDLQNLVSRLLDTNPGTRISLDEIMQDQWFNRGGYNDTLTRPKEFEWEENRAVSKSLNAFHLISFSSGFDMSGLVTDPEYLDSTERFVTRVVPESVTVTVEEVAVSEKLTVKKEESGCGVRIEGLDGNFVIVVGVYRLTDEVVIVEVKRRERREGSGTRFWKDALRPRLLALAQ* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0842 434 Pfam NAF domain 315 373 IPR004041 GO:0007165
Apr10g0842 434 Pfam Protein kinase domain 35 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0842 434 SMART serkin_6 35 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0842 434 ProSiteProfiles NAF domain profile. 312 336 IPR018451 GO:0007165
Apr10g0842 434 ProSitePatterns Protein kinases ATP-binding region signature. 41 64 IPR017441 GO:0005524
Apr10g0842 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Apr10g0842 434 Gene3D Phosphorylase Kinase; domain 1 26 114 - -
Apr10g0842 434 CDD CIPK_C 318 427 - -
Apr10g0842 434 PANTHER - 22 431 - -
Apr10g0842 434 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14 22 431 - -
Apr10g0842 434 Gene3D Kinase associated domain 1, KA1 313 433 - -
Apr10g0842 434 ProSiteProfiles Protein kinase domain profile. 35 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0842 434 SUPERFAMILY Protein kinase-like (PK-like) 31 324 IPR011009 -
Apr10g0842 434 Gene3D Transferase(Phosphotransferase) domain 1 116 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0842 Apr-Chr10 20721692 20722996 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0842 30 430 CBL-interacting serine-threonine protein kinases AT2G30360 56.511 5.30e-161 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Apr10g0842 Pkinase 1.2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0842 - K12761 gmx:100788245 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0842 10 20721692 20722996 Apr10g0842 10 20721692 20722996 ECH