Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0841 ATGGAGCAGAAAGGAAGTGTGCTTATGCAACGATATGAACTAGGAAGATTATTAGGCCAAGGAACTTTTGCGAAGGTCTACCATGGAAGGAACCTCAAAACTGGCATGAGTGTAGCCATTAAAATTATTGATAAAGAGAGGGTTTTGAAAGTTGGCATGATTGATCAGATTAAGCGTGAAATTTCAGTAATGAGACTGATCAGGCATCCACATGTGGTAGAGCTTTATGAGGTAATGGCCAGCAAAACCAAAATTTATTTTGTCATGGAGTATGTAAAAGGAGGGGAGCTATTCAACAAGGTATCCAAAGGAAAGCTAAAGCAAGATGATGCTAGGAGATATTTTCAGCAATTGATCAGTGCTGTTGACTACTGCCATAGCCGAGGTGTGTGTCATCGCGATCTGAAACCCGAAAATCTTCTATTGGATGAAAATGAAAATTTGAAGGTCTCAGATTTTGGGTTAAGTGCGCTTGCTGAAACCAAGCACCAAGATGGACTACTCCATACTACATGTGGTACCCCTGCGTATGTAGCCCCAGAAGTGATAAACAGAAAGGGTTATGATGGAGCCAAAGCTGATATATGGTCATGTGGTGTGATCTTGTATGTTCTATTGGCTGGTTTTCTTCCATTTAGAGATTCAAATCTGATGGAGATGTACAGGAAGATTGGCAAGGGAGAATTCAAATTTCCTAACTGGTTTGCACCGGATGTACGCAGATTGTTGTCCAGAATCTTGGATCCAAATCCAAAGACCAGGATATCAATGGCCAAAATTATGGAAAGTTCTTGGTTCAAAAAGGGGTTAGAGAAGCCCATCATCACCAAGAATGACGACAAAGAACTAGCTCCTCTTGATGCTGATGGAGTATTTGGAGCTTGTGAGAATGGAGGCCCTATGGAACTGTCAAAAGACTCAAAACCTTGTAATTTAAATGCTTTTGATATCATCTCTTTTTCATCAGGTTTTGACTTGTCTGGTTTGTTTGAGGAGACTGATCGAAAGAAAGAATTGCGATTTACATCTAACAAGCCGGCTTCAATTATCATCTCTAAGCTAGAAGAAATTTGTAAGCGTCTTCGGCTGAAAGTGAAGAAGAAAGATGGAGGTTTGTTCCAGTTAGAAGGTTCCAAGGAAGGAAGGAAAGGGCCTTTGGGTATTGATGCAGAGATTTTTGAGATCACCCCTATCTTTCATCTAGTGGAGTTAAAGAAGTCCAATGGAGATACATTAGAGTACCAAAAGCTTTTGAAACAAGAAGTTAGGCCTGCACTTAAGGACATTGTTTGGAATTGGCAAGGAGAACAGCCACAGCAATTGCAACATGTAGTAGTGCAGAAAGAGGAACAGCCTTATTCTGGCATATCAGAGGTTGTAGCACAACCAACTGCATAA 1398 0.407 MEQKGSVLMQRYELGRLLGQGTFAKVYHGRNLKTGMSVAIKIIDKERVLKVGMIDQIKREISVMRLIRHPHVVELYEVMASKTKIYFVMEYVKGGELFNKVSKGKLKQDDARRYFQQLISAVDYCHSRGVCHRDLKPENLLLDENENLKVSDFGLSALAETKHQDGLLHTTCGTPAYVAPEVINRKGYDGAKADIWSCGVILYVLLAGFLPFRDSNLMEMYRKIGKGEFKFPNWFAPDVRRLLSRILDPNPKTRISMAKIMESSWFKKGLEKPIITKNDDKELAPLDADGVFGACENGGPMELSKDSKPCNLNAFDIISFSSGFDLSGLFEETDRKKELRFTSNKPASIIISKLEEICKRLRLKVKKKDGGLFQLEGSKEGRKGPLGIDAEIFEITPIFHLVELKKSNGDTLEYQKLLKQEVRPALKDIVWNWQGEQPQQLQHVVVQKEEQPYSGISEVVAQPTA* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0841 465 Pfam NAF domain 309 367 IPR004041 GO:0007165
Apr10g0841 465 CDD CIPK_C 313 427 - -
Apr10g0841 465 Gene3D Transferase(Phosphotransferase) domain 1 3 298 - -
Apr10g0841 465 PANTHER - 2 445 - -
Apr10g0841 465 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 2 445 - -
Apr10g0841 465 ProSitePatterns Protein kinases ATP-binding region signature. 18 50 IPR017441 GO:0005524
Apr10g0841 465 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0841 465 ProSiteProfiles NAF domain profile. 307 331 IPR018451 GO:0007165
Apr10g0841 465 Gene3D Kinase associated domain 1, KA1 306 432 - -
Apr10g0841 465 CDD STKc_SnRK3 11 265 - -
Apr10g0841 465 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0841 465 SUPERFAMILY Protein kinase-like (PK-like) 8 267 IPR011009 -
Apr10g0841 465 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0841 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0841 Apr-Chr10 20673656 20677161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0841 1 439 CBL-interacting serine-threonine protein kinases AT5G58380 68.132 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Apr10g0841 Pkinase 3.6e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0841 K07198 - gmx:100815651 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0841 10 20673656 20677161 Apr10g0841 10 20673656 20677161 ECH
Apr4g2124 4 30253097 30256571 Apr10g0841 10 20673656 20677161 ECH